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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11468#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1022 fasta sequence
[CTCTTCTCGCTGGAGCAGCAGGAGGAGGAGGAGATAGAGTGAGGCCGTGACGGCGACGGCGAGGTCTGGGGGCGGGGCGCGATGGGAGACGGAGCGGAGGCGGCGGGGGCGACCGCGGCGAGCAGGTTCGGGACGATCTGCGTCTTCTGCGGCAGCAACGCGGGGCGCCGCAGGGTGTTCGGCGACGCGGCGCTCGACCTCGGCCACGAGCTGGTGAGGCGGGGCGTCGATCTGGTCTACGGCGGCGGCAGCATCGGGCTGATGGGCTTGATCGCGCGTACGGTTCTCGACGGCGGCCGCCGTGTCGTCGGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGATATCAGGTGAGAGTGTGGGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCAAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATAACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTACTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGATTGTAGACAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACAAAGATGG-AGCAATACACTCGGTTGCACCAGGAGGTGGCCCCTGCAACAAGCTGGGAGATCTCAGAGCTTGGCT-ATGGAAGAACACCGGGCGCTGATCAATCCTAGCCCCCCTCACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTTTGCTTTTGTTTTCCCTTGCTTCTTGTGATCAAGTGTCAAATTAAACTCCTCACCATGGACATGGTCTCCAGTTGCTGTGTTCTTGATTTCCATCGATCCGGTGACGAACCAAAGAAGCCGGTCGTCACCGTCTACAAATTTATTTGAAGTTTGAACTGCTGCATGAATGCATGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTAAAAAAAAAAAAA]
[+] EMBL CB618649 [CTCTTCTCGCTGGAGCAGCAGGAGGAGGAGGAGATAGAGTGAGGCCGTGACGGCGACGGCGAGGTCTGGGGGCGGGGCGCGATGGGAGACGGAGCGGAGGCGGCGGGGGCGACCGCGGCGAGCAGGTTCGGGACGATCTGCGTCTTCTGCGGCAGCAACGCGGGGCGCCGCAGGGTGTTCGGCGACGCGGCGCTCGACCTCGGCCACGAGCTGGTGAGGCGGGGCGTCGATCTGGTCTACGGCGGCGGCAGCATCGGGCTGATGGGCTTGATCGCGCGTACGGTTCTCGACGGCGGCCGCCGTGTCGTCGGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGATATCAGGTGAGAGTGTGGGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCAAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATAACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTACTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGATTGTAGACAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACAAAGATGG AGCAATACACTCGGTTGCACCAGGAGGTGGCCCCTGCAACAAGCTGGGAGATCTCAGAGCTTGGCT ATGGAAGAACACCGGGCGCTGATCAATCCTAGCCCCCCTCACTTCCAAAGTGACTAGTACAAGCTCTAC ]
[+] EMBL AK068633 [ GAGGAGATAGAGTGAGGCCGTGACGGCGACGGCGAGGTCTGGGGGCGGGGCGCGATGGGAGACGGAGCGGAGGCGGCGGGGGCGACCGCGGCGAGCAGGTTCGGGACGATCTGCGTCTTCTGCGGCAGCAACGCGGGGCGCCGCAGGGTGTTCGGCGACGCGGCGCTCGACCTCGGCCACGAGCTGGTGAGGCGGGGCGTCGATCTGGTCTACGGCGGCGGCAGCATCGGGCTGATGGGCTTGATCGCGCGTACGGTTCTCGACGGCGGCCGCCGTGTCGTCGGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGATATCAGGTGAGAGTGTGGGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCAAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATAACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTACTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGATTGTAGACAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACAAAGATGG AGCAATACACTCGGTTGCACCAGGAGGTGGCCCCTGCAACAAGCTGGGAGATCTCAGAGCTTGGCT ATGGAAGAACACCGGGCGCTGATCAATCATAGCCCCCCTCACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTTTGCTTTTGTTTTCCCTTGCTTCTTGTGATCAAGTGTCAAATTAAA ]
[-] EMBL AU070328 [ AACTCTGATTGTAGACAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACAAAGATGGCAGCAATACACTC GTTGCACCAGGAGGTGGCCCCTGCAACAAGCTGGGAGATCTCAGAGCTTGGCTNATGGAAGAACACCGGGCGCTGATCAATCCTAGCCCCCCTCACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTTTGCTTTTGTTTTCCCTTGCTTCTTGTGATCAAGTGTCAAATTAAACTCCTCACCATGGACATGGTCTCCAGTTGCTGTGTTCTTGATTTCCATCGATCCGGTGACGAACCAAAGAAGCCGGTCGTCACCGTCTACAAATTTATTTGAAGTTTGAACTGCTGCATGAATGCATGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTAAAAAAAAAAAAA]
[+] EMBL AU095867 [ GGTGGCCCCTGCAACAAGCTGGGAGATCTCAGAGCTTGGCT ATGGAAGAACACCGGCCGCTGATCAATCCTAGCCCCCCTCACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTTTGCTTTTGTTTTCCCTTGCTTCTTGTGATCAAGTGTCAAATTAAACTCCTCACCATGGACATGGTCTCCAGTTGCTGTGTTCTTGATTTCCATCGATCCGGTGACGAACCAAAGAAGCCGGTCGTCACCGTCTACAAATTTATTTGAAGTTTGAACTGCTGCATGAATGCATGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTAAAAAAAAAAAA ]
consensusID : consensus_11468#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence
[GGTGACGAACCAAAGAAGCCGGTCGTCACCGTCTACAAATTTATTTGAAGTTTGAACTGCTGCATGAATGCATGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTATGTTTTGATTATTCGTGGAATCCGGTATGGGAGCGGCTGCGGGAAAAGCAGCTGCAATTTTCTCGGTCGCCGACGTCACGGGTGGATCAGTGGAATGACATCTGATTGGATTTGTACTACTCATTTGAGGCTTTTCTTTTGGGGCTAAGAATGATGATGATGATGATGCGAGATCGCGAGGGTGATGCACTGGATTCTCATCGCTTTGAAGGTAGGCCGCGGGGGGCGTACTTTCCTCTGCTGGGTCGGTCGGTCTTTTTTGGCATTTGGTTTGCTTTACGGAGCGCGTCTTGTGTTGGTCTCGTCGTCTTTGGTTGATGACGGTCACGTCGGCACGTCCACGACGTTGTGGATGGAGATCCCTCGCTCCTGTGCTTTTCCTTTTCTTTCTCATTTTTCGCTTGGTTTGGCTTTGCTTGCACCCGATCGATCGATGTATCTGCACGACACGTCGATACGATCAGCGGCGAAACCAGAAATTATAAGAGAATAGGGCTAAGATATAACTCTAGAGCTGTATTTAATTCACACCAAAATTGAAAGTTTGGTTGAAATTGAAACGATATGACGG]
[-] EMBL CB618650 [GGTGACGAACCAAAGAAGCCGGTCGTCACCGTCTACAAATTTATTTGAAGTTTGAACTGCTGCATGAATGCATGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTATGTTTTGATTATTCGTGGAATCCGGTATGGGAGCGGCTGCGGGAAAAGCAGCTGCAATTTTCTCGGTCGCCGACGTCACGGGTGGATCAGTGGAATGACATCTGATTGGATTTGTACTACTCATTTGAGGCTTTTCTTTTGGGGCTAAGAATGATGATGATGATGATGCGAGATCGCGAGGGTGATGCACTGGATTCTCATCGCTTTGAAGGTAGGCCGCGGGGGGCGTACTTTCCTCTGCTGGGTCGGTCGGTCTTTTTTGGCATTTGGTTTGCTTTACGGAGCGCGTCTTGTGTTGGTCTCGTCGTCTTTGGTTGATGACGGTCACGTCGGCACGTCCACGACGTTGTGGATGGAGATCCCTCGCTCCTGTGCTTTTCCTTTTCTTTCTCATTTTTCGCTTGGTTTGGCTTTGCTTGCACCCGATCGATCGATGTATCTGCACGACACGTCGATACGATCAGCGGCGAAACCAGAAATTATAAGAGAATAGGGCTAAGATATAACTCTAGAGCTGTATTTAATTCACACCAAAATTGAAAGTTTGGTTGAAATTGAAACGATATGACGG]
consensusID : consensus_11468#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence
[CACTTGCTATCTTGAATTTGTCAGGGTGATGTTTATCTTGAATATGTCAGGGTGAAGTTACCTGATCCTAACATAATTGATAATAGTACGTGTATGCGATCATTTAAAAGAGATGTTTTACTTTGACTTGGAAGGACTGTACAGCTTTGTGAAGAATTTTGTAAAGGGAGTGGTTTGTGTTGACATTTGCAAATGTTGCTTTTCTAACAGATATCAGGTGAGAGTGTGGGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCAAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATAACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTACTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGATTGTAGNCAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACNNNNATNNNNCAATACACTCAGTTGCACCNNNNNNNNGCCCCTGCAACAAGCTGNN]
[+] EMBL CF197179 [CACTTGCTATCTTGAATTTGTCAGGGTGATGTTTATCTTGAATATGTCAGGGTGAAGTTACCTGATCCTAACATAATTGATAATAGTACGTGTATGCGATCATTTAAAAGAGATGTTTTACTTTGACTTGGAAGGACTGTACAGCTTTGTGAAGAATTTTGTAAAGGGAGTGGTTTGTGTTGACATTTGCAAATGTTGCTTTTCTAACAGATATCAGGTGAGAGTGTGGGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCAAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATAACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTACTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGATTGTAGNCAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACNNNNATNNNNCAATACACTCAGTTGCACCNNNNNNNNGCCCCTGCAACAAGCTGNN]
consensusID : consensus_11468#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence
[CGTGTCGTCGGGTACGTACGCACGCAGCCAGCTTCGTTTCTGCGCCTGAGAGCGATTTCCTCATTACTTTTGCTGCCTTGCTTTCGCGGCTGCACCTGCGGATGCCTGTGATTCTCGTGTACGTGCTACACCACCATCTAATGCGGCGTGATAAAATTTTTGCTTGATTTATTCGCAGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGATATCAGGTGAGAGTGTGGGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCAAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATAACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTACTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGATTGTAGACAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACAAAGATGGAGCAATACACT]
[+] EMBL CF304660 [CGTGTCGTCGGGTACGTACGCACGCAGCCAGCTTCGTTTCTGCGCCTGAGAGCGATTTCCTCATTACTTTTGCTGCCTTGCTTTCGCGGCTGCACCTGCGGATGCCTGTGATTCTCGTGTACGTGCTACACCACCATCTAATGCGGCGTGATAAAATTTTTGCTTGATTTATTCGCAGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGATATCAGGTGAGAGTGTGGGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCAAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATAACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTACTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGATTGTAGACAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACAAAGATGGAGCAATACACT]
consensusID : consensus_11468#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence
[CTGCNCCAACTGCAAGTTGAATTCTTGACNAAGATGGAGGAGGTGCCCCTGCAACAAGCTGGGAGATCTCAGAGCTTGGCTATGGAAGAACACCGGGCGCTGATCAATCCTAGCCCCCCTNACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTTTGCTTTTGTTTTCCCTTGCTTCTTGTGANCAAGTGTCAAATTAAACTCCTCACCATGGACATGGTCNCCAGTTGCTGTGTTCTTGATTTCCATCGANCCGGTGACGAACCAAANAANCCGGTCGTCACCNNCTACAAATTTATTTGAAGTTTGAACTGCTGCATGAATGCNTGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTATGTTTTGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU070452 [CTGCNCCAACTGCAAGTTGAATTCTTGACNAAGATGGAGGAGGTGCCCCTGCAACAAGCTGGGAGATCTCAGAGCTTGGCTATGGAAGAACACCGGGCGCTGATCAATCCTAGCCCCCCTNACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTTTGCTTTTGTTTTCCCTTGCTTCTTGTGANCAAGTGTCAAATTAAACTCCTCACCATGGACATGGTCNCCAGTTGCTGTGTTCTTGATTTCCATCGANCCGGTGACGAACCAAANAANCCGGTCGTCACCNNCTACAAATTTATTTGAAGTTTGAACTGCTGCATGAATGCNTGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTATGTTTTGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11468#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 281 fasta sequence
[GCAGCCAGCTTCGTTTCTGCGCCTGAGAGCGATTTCCTCATTACTTTTGCTGCCTTGCTTTCGCGGCTGCACCTGCGGATGCCTGTGATTCTCGTGTACGTGCTACACCACCATCTAATGCGGCGTGATAAAATTTTTGCTTGATTTATTCGCAGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGGTCTGCAATCTCTTCGACTTCCTTTCAGTATTTCGTAGATTTTTCAGGGTTCAGAAGTGTCGTTGAATTCAGCTCTGTATTGGTATGTTTTAGCG]
[+] EMBL AU176488 [GCAGCCAGCTTCGTTTCTGCGCCTGAGAGCGATTTCCTCATTACTTTTGCTGCCTTGCTTTCGCGGCTGCACCTGCGGATGCCTGTGATTCTCGTGTACGTGCTACACCACCATCTAATGCGGCGTGATAAAATTTTTGCTTGATTTATTCGCAGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGGTCTGCAATCTCTTCGACTTCCTTTCAGTATTTCGTAGATTTTTCAGGGTTCAGAAGTGTCGTTGAATTCAGCTCTGTATTGGTATGTTTTAGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11468#0 CTCTTCTCGCTGGAGCAGCAGGAGGAGGAGGAGATAGAGTGAGGCCGTGACGGCGACGGC 60
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 GAGGTCTGGGGGCGGGGCGCGATGGGAGACGGAGCGGAGGCGGCGGGGGCGACCGCGGCG 120
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 AGCAGGTTCGGGACGATCTGCGTCTTCTGCGGCAGCAACGCGGGGCGCCGCAGGGTGTTC 180
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 GGCGACGCGGCGCTCGACCTCGGCCACGAGCTGGTGAGGCGGGGCGTCGATCTGGTCTAC 240
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 GGCGGCGGCAGCATCGGGCTGATGGGCTTGATCGCGCGTACGGTTCTCGACGGCGGCCGC 300
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 CGTGTCGTCGGGGTGATTCCTAGAGCTCTCATGGCTGTCGAGATATCAGGTGAGAGTGTG 360
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 GGAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCC 420
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 AAAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTAGAGATGATA 480
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 ACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTAC 540
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ------------------------------------------------------------
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ------------------------------------------------------------
consensus_11468#1 ------------------------------------------------------------
consensus_11468#0 TACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGAT 600
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ----------------------------------------------------------CG 2
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 --------------------------------------------------------CACT 4
consensus_11468#1 --GGTGACGAACCAAAGAAGCCGGTCGTCACCGTCTACAAATTTATTTGAAGTTTGAACT 58
consensus_11468#0 TGTAGACAAATATTTGTATCTGCACCAACTGCAAG-T-GAATTGCTGACAAAGATGGAGC 658
consensus_11468#4 -------------------CTGCNCCAACTGCAAG-TTGAATTCTTGACNAAGATGGAG- 39
consensus_11468#3 TGTCGTCGGGTACGTACGCACGCAGCCAGCTTCGT-TTCTGCGCCTGAGAGCGATTTCCT 61
consensus_11468#5 ---------------------GCAGCCAGCTTCGT-TTCTGCGCCTGAGAGCGATTTCCT 38
consensus_11468#2 TGCTATCTTGAATTTGTCAGGGTGATGTTTATCTT-GAATATGTCAGGGTGAAGTTACCT 63
consensus_11468#1 GCTGCATGAATGCATGATCATGTAGTGGGAGTAATATAATTTACTAGTAATTTATGTTTT 118
* * *
consensus_11468#0 AATACACTCGGTTGCACCAGGAGGTGGCCCCTGCA--ACAAGCTGGGAGATCTCAGA--- 713
consensus_11468#4 --------------------GAGGTG-CCCCTGCA--ACAAGCTGGGAGATCTCAGA--- 73
consensus_11468#3 CAT--TACTTTTGCTGCCTTGCTTTCGCGGCTGC---ACCTGCGGATGCCTGTGATTC-- 114
consensus_11468#5 CAT--TACTTTTGCTGCCTTGCTTTCGCGGCTGC---ACCTGCGGATGCCTGTGATTC-- 91
consensus_11468#2 GATCCTAACATAATTGATAATAGTACGTGTATGCG--ATCATTTAAAAGAGATGTTTT-- 119
consensus_11468#1 GATTATTCGTGGAATCCGGTATGGGAGCGGCTGCGGGAAAAGCAGCTGCAATTTTCTCGG 178
*** * *
consensus_11468#0 GCTTGGCTAT----GGAAGAAC-------ACCGGGCGCTGATCAATCCTAGCCCCC--CT 760
consensus_11468#4 GCTTGGCTAT----GGAAGAAC-------ACCGGGCGCTGATCAATCCTAGCCCCC--CT 120
consensus_11468#3 TCGTGTACGT----GCTACACCACCATCTAATGCGGCGTGATAAAATTTTTGCTTG-ATT 169
consensus_11468#5 TCGTGTACGT----GCTACACCACCATCTAATGCGGCGTGATAAAATTTTTGCTTG-ATT 146
consensus_11468#2 ACTTTGACTT----GGAAGGAC----TGTACAGCTTTGTGAAGAATTTTGTAAAGGGAGT 171
consensus_11468#1 TCGCCGACGTCACGGGTGGATCA--GTGGAATGACATCTGATTGGATTTGTACTAC---T 233
* * * * * * *** * *
consensus_11468#0 CACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTT-TGCTTTTGTTT----TCCCT 815
consensus_11468#4 NACTTCAAAAGTGACTAGTACAAGCTCTACTAATGCCTT-TGCTTTTGTTT----TCCCT 175
consensus_11468#3 TATTCGCAGGGTGATTCCTAGAGCTCTCATGGCTGTCGA-GATATCAGGTGAGAGTGTGG 228
consensus_11468#5 TATTCGCAGGGTGATTCCTAGAGCTCTCATGGCTGTCGA-GGTCTGCAATC----TCTTC 201
consensus_11468#2 GGTTTGTGTTGACATTTGCAAATGTTGCTTTTCTAAC-A-GATATCAGGTGAGAGTGTGG 229
consensus_11468#1 CATTTGAGGCTTTTCTTTTGGGGCTAAGAATGATGATGATGATGATGCGAGATCGCGAGG 293
* * *
consensus_11468#0 TGCTTCTTGTGATCAAGTGTCAAATTAAACTCCTCACCATGGACATGG-TCTCC-AGTTG 873
consensus_11468#4 TGCTTCTTGTGANCAAGTGTCAAATTAAACTCCTCACCATGGACATGG-TCNCC-AGTTG 233
consensus_11468#3 GAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCA 288
consensus_11468#5 GACTTCCTTTCAGTATTTCGTAGATTTTT---CAGGGTTCAGAAGTG--TCGTTGAATTC 256
consensus_11468#2 GAGAAGTAATAGTTGTACAGGACATGCATGAGCGGAAAGCGGAGATGGCTCGGCGATCCA 289
consensus_11468#1 GTGATGCACTGGATTCTCATCGCTTTGAAG-GTAGGCCGCGGGGGGCGTACTTTCCTCTG 352
* * * *
consensus_11468#0 CTGTGTTC-TTGATTTCCATCGATCCGGTGACGAACCAAAGAAGCCGGTC--GTCAC--C 928
consensus_11468#4 CTGTGTTC-TTGATTTCCATCGANCCGGTGACGAACCAAANAANCCGGTC--GTCAC--C 288
consensus_11468#3 AAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTA--GAGATGAT 346
consensus_11468#5 AGCTCTGTATTGGTATGTTTTAGCG----------------------------------- 281
consensus_11468#2 AAGCGTTCATTGCTCTTCCTGGGGGCTATGGAACAATGGAGGAGCTGTTA--GAGATGAT 347
consensus_11468#1 CTGGGTCGGTCGGTCTTTTTTGGCATTTGGTTTGCTTTACGGAGCGCGTCTTGTGTTGGT 412
* * * * * *
consensus_11468#0 GTCTACAAATTTATTTGAAGTT--TGAACTGCTGCATGAATGCATGATCATGTAGTGGGA 986
consensus_11468#4 NNCTACAAATTTATTTGAAGTT--TGAACTGCTGCATGAATGCNTGATCATGTAGTGGGA 346
consensus_11468#3 AACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTA 406
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 AACATGGTGCCAACTTGGAATTCATGACAAGCCAGTTGGATTGCTAAATGTTGACGGTTA 407
consensus_11468#1 CTCGTCGTCTTTGGTTGATGACGGTCACGT-CGGCACGTCCACGACGTTGTGGATGGAGA 471
consensus_11468#0 GTAATATAATTTACTAGTAATTTA----------AAAAAAAAAAAA-------------- 1022
consensus_11468#4 GTAATATAATTTACTAGTAATTTATGTTTTGATTAAAAAAAAAAAAAAAAAAAAAAAAAA 406
consensus_11468#3 CTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGA 466
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 CTACGATCCACTGCTCGCGTTGTTCGACAAAGGCGAGGCGGAGGGCTTCATCAACTCTGA 467
consensus_11468#1 TCCCTCGCTCCTGTGCTTTTCCTTTTCTTTCTCATTTTTCGCTTGGTTTGGCTTTGCTTG 531
consensus_11468#0 ------------------------------------------------------------
consensus_11468#4 AAAA-------------------------------------------------------- 410
consensus_11468#3 TTGTAGACAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACAAAGATGGAGCA 526
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 TTGTAGNCAAATATTTGTATCTGCACCAACTGCAAGTGAATTGCTGACNNNNATNNNNCA 527
consensus_11468#1 CACCCGATCGATCGATGTATCTGCACGACACGTCGATACGATCAGCGGCGAAACCAGAAA 591
consensus_11468#0 ------------------------------------------------------------
consensus_11468#4 ------------------------------------------------------------
consensus_11468#3 ATACACT----------------------------------------------------- 533
consensus_11468#5 ------------------------------------------------------------
consensus_11468#2 ATACACTCAGTTGCACCNNNNNNNNGCCCCTGCAACAAGCTGNN---------------- 571
consensus_11468#1 TTATAAGAGAATAGGGCTAAGATATAACTCTAGAGCTGTATTTAATTCACACCAAAATTG 651
consensus_11468#0 --------------------------------
consensus_11468#4 --------------------------------
consensus_11468#3 --------------------------------
consensus_11468#5 --------------------------------
consensus_11468#2 --------------------------------
consensus_11468#1 AAAGTTTGGTTGAAATTGAAACGATATGACGG 683
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||