cluster # 11485

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Oryza sativa
cluster # 11485 cluster # 11485 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11485#0 length = 1120 sequences # 5

consensus_11485#1 length = 337 sequences # 3
consensus_11485#2 length = 256 sequences # 1

consensusID : consensus_11485#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1120
fasta sequence

                              [ACAAAGTCAAACGGTTTCNACCGATCACTAGAGGATATCCTGGTCGCGCGGACCCCCACAAATAACGTAGGGACATCACCTAATGCTTCTTTCCCCCACCCGTTTTTNCTTCCCCCTCTCCTCACCTCTCCTCTCGATCGCNTCCGCTGCCACCCTCCACCATTCTCATTCCCCCACCCCTCCCCCCTCGCGAGCCATGGCTGCCGCCGCCGCTGTAAGGTCCGTGGCGATCTCGCTCTTCGTCGTCGCCCTCGCCGTGGCAGCGTTCGCCTGGTCCCCGTCGTCGCTGGCGGGCGGCGCCAGCCACCACCTGC-GGCTGGAGGAGGTGGCCAGCGCCGCCGGCGCCG-GCGCGGC-GGGGCATGGCAGCATGTCGGCGGCCGCCGGGAAGGACGGTGGCGCCAGCGCGGCGGCGCATGGTAGCGCGCCGGCGGCCGCCGGGATAGA-AAGAACGGGTACCTCAGCTTCTTCGCCGCCATGCGCCGCGACAGCGTG-CCGTGCACCCGCAAAGGCGCCAGCTACTACAACTGCGTCCCCGGCGCGCCGCCCAGCCCGTACAACCGCAGCTGCGAGCACATCACCCGCTGCCACGGCTGATCGATCACACCATCGCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCTGCCGGTGCCGGCGCCGGCGATGATGATTCGCTTTGTTTCTTTGACGACGACGACGATGTGCACGCATATGCATATGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTGCCACTGCGTTCTCTTATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGGTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAAGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTATTTCACAACTATTGTATGGTGTGGAATTATTCTCCTTCAATCCCCTCCATTCTCCTTTTCTTGAGGATTAAATGAACAAGGTCTAAATTAAGCCGATTTCAT]

[+] EMBL C73332               [ACAAAGTCAAACGGTTTCNACCGATCACTAGAGGATATCCTGGTCGCGCGGACCCCCACAAATAACGTAGGGACATCACCTAATGCTTCTTTCCCCCACCCGTTTTTNCTTCCCCCTCTCCTCACCTCTCCTCTCGATCGCNTCCGCTGCCACCCTCCACCATTCTAATTCCCCCACCCCTCCCCCCTCGCAAGCNATGGCTGCCGCCGCCGCTGTAAGGTCCGTGGCGATCTCGCTCTTCGTCGTCGCCCTCGCCGTGGCAGCGTTCGCCTGGTCCCCGTCGTCGCTGGCGGGCGGCG CANAACCCACCTGCGGGCTGGAGGAGGTGG CAGCGCCGCCGG GCNGTGCGCGGCGGGGGCATGGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK069047             [                                                                                                                                               CCGCTGCCACCCTCCACCATTCTCATTCCCCCACCCCTCCCCCCTCGCGAGCCATGGCTGCCGCCGCCGCTGTAAGGTCCGTGGCGATCTCGCTCTTCGTCGTCGCCCTCGCCGTGGCAGCGTTCGCCTGGTCCCCGTCGTCGCTGGCGGGCGGCGCCAGCCACCACCTGC GGCTGGAGGAGGTGGCCAGCGCCGCCGGCGCCG GCGCGGC GGGGCATGGCAGCATGTCGGCGGCCGCCGGGAAGGACGGTGGCGCCAGCGCGGCGGCGCATGGTAGCGCGCCGGCGGCCGCCGGGATAGA AAGAACGGGTACCTCAGCTTCTTCGCCGCCATGCGCCGCGACAGCGTG CCGTGCACCCGCAAAGGCGCCAGCTACTACAACTGCGTCCCCGGCGCGCCGCCCAGCCCGTACAACCGCAGCTGCGAGCACATCACCCGCTGCCACGGCTGATCGATCACACCATCGCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCTGCCGGTGCCGGCGCCGGCGATGATGATTCGCTTTGTTTCTTTGACGACGACGACGATGTGCACGCATATGCATATGCGTACTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTGCCACTGCGTTCTCTTATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGGTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAAGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTATTTCACAACTATTGTATGGTGTGGAATTATTCTCCTTCAATCCCCTCCATTCTCCTTTTCTTGAGGATTAAATGAACAAGGTCTAAATTAAGCCGATTTCAT]
[+] EMBL AK071210             [                                                                                                                                                    GCCACCCTCCACCATTCTCATTCCCCCACCCCTCCCCCCTCGCGAGCCATGGCTGCCGCCGCCGCTGTAAGGTCCGTGGCGATCTCGCTCTTCGTCGTCGCCCTCGCCGTGGCAGCGTTCGCCTGGTCCCCGTCGTCGCTGGCGGGCGGCGCCAGCCACCACCTGC GGCTGGAGGAGGTGGCCAGCGCCGCCGGCGCCG GCGCGGC GGGGCATGGCAGCATGTCGGCGGCCGCCGGGAAGGACGGTGGCGCCAGCGCGGCGGCGCATGGTAGCGCGCCGGCGGCCGCCGGGATAGACAAGAACGGGTACCTCAGCTTCTTCGCCGCCATGCGCCGCGACAGCGTG CCGTGCACCCGCAAAGGCGCCAGCTACTACAACTGCGTCCCCGGCGCGCCGCCCAGCCCGTACAACCGCAGCTGCGAGCACATCACCCGCTGCCACGGCTGATCGATCACACCATCGCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCTGCCGGTGCCGGCGCCGGCGATGATGATTCGCTTTGTTTCTTTGACGACGACGACGATGTGCACGCATATGCATATGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTGCCACTGCGTTCTCTTATTATTATCCATGTCTACTGTCTCAT                                                                                                                                                                                                                                                               ]
[+] EMBL AU077602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              c AAGAACGGGTACCTCAGCTTCTTCGCCGCCATGCGCCGCGACAGCGTG CCGTGCACCCGCAAAGGCGCCAGCTACTACAACTGCGTCCCCGGCGCGCCGCCCAGCCCGTACAACCGCAGCTGCGAGCACATCACCCGCTGCCACGGCTGATCGATCACACCATCGCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCTGCCGGTGCCGGCGCCGGCGATGATGATTCGCTTTGTTTCTTTGACGACGACGACGATGTGCACGCATATGCATATGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTGCCACTGCGTTCTCTTATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGTTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAAGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGAC                                                                                                              ]
[+] EMBL AU070114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              c AAGAACGGGTACCTCAGCTTCTTCGCCGCCATGCGCCGCGACAG NTGACCGTGCACCCGCAAAGGCGCCA CTACTACAACTGCGTCCCCGGCGCGCCGCCCAGCCCGTACAACCGCAGCTGCGAGCACATCACCCGCTGCCACGGCTGATCGATCACACCATCGCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCTGCCGGTGCCGGCGCCGGCGATGATGATTCGCTTTGTTTCTTTGACGACGACGACGATGTGCACGCATATGCATATGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTNTGTGTTTGTTCTCGTGTTGTTGCCGTGCCACTGCGTTCTCTTATTATTATCCATGTC                                                                                                                                                                                                                                                                          ]




>consensus_11485#0
ACAAAGTCAAACGGTTTCNACCGATCACTAGAGGATATCCTGGTCGCGCGGACCCCCACA
AATAACGTAGGGACATCACCTAATGCTTCTTTCCCCCACCCGTTTTTNCTTCCCCCTCTC
CTCACCTCTCCTCTCGATCGCNTCCGCTGCCACCCTCCACCATTCTCATTCCCCCACCCC
TCCCCCCTCGCGAGCCATGGCTGCCGCCGCCGCTGTAAGGTCCGTGGCGATCTCGCTCTT
CGTCGTCGCCCTCGCCGTGGCAGCGTTCGCCTGGTCCCCGTCGTCGCTGGCGGGCGGCGC
CAGCCACCACCTGCGGCTGGAGGAGGTGGCCAGCGCCGCCGGCGCCGGCGCGGCGGGGCA
TGGCAGCATGTCGGCGGCCGCCGGGAAGGACGGTGGCGCCAGCGCGGCGGCGCATGGTAG
CGCGCCGGCGGCCGCCGGGATAGAAAGAACGGGTACCTCAGCTTCTTCGCCGCCATGCGC
CGCGACAGCGTGCCGTGCACCCGCAAAGGCGCCAGCTACTACAACTGCGTCCCCGGCGCG
CCGCCCAGCCCGTACAACCGCAGCTGCGAGCACATCACCCGCTGCCACGGCTGATCGATC
ACACCATCGCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCTGCCGGTGCCGGCGC
CGGCGATGATGATTCGCTTTGTTTCTTTGACGACGACGACGATGTGCACGCATATGCATA
TGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGAC
ATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTGCCACTGCGTTCTCTTA
TTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGGTTCTTT
TGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAA
GGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTATT
TCACAACTATTGTATGGTGTGGAATTATTCTCCTTCAATCCCCTCCATTCTCCTTTTCTT
GAGGATTAAATGAACAAGGTCTAAATTAAGCCGATTTCAT

consensusID : consensus_11485#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 337
fasta sequence

                              [ATGCATATGCGTGCTA-GCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTG-CCACTGCGTTCTCTTATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGTTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAAGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU165678             [ATGCATATGCGTGCTA GCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTG CCACTGCGTTCTCTTATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGTTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAAGGTTTTGTTTGNTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU162283             [ATGCATATGCGT CTANGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTG CCACTGCGTTCTCTTATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGTTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAAGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTAAAAAAAAAAAAA                    ]
[+] EMBL AU077681             [                                                        AATAAAAATGCCATGAAATAAGGTGTGTGTGTGTTTG TCTCGTGTTGTTNCCGTGNCCA TGCGTTCNCTTATTATTANCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGTTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTAAGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAAAA   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11485#1
ATGCATATGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAA
AAATGACATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTGCCACTGCGT
TCTCTTATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTG
TTTCTTTTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTC
CCTGTAAGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGG
ACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_11485#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 256
fasta sequence

                              [GTGTGTTTGTTCCCGTGTTGTTGCCGTGGCCACTGCGNTCNCTTANTATTANCCATGTCTACTGTCNCATTGTATTAGCTACTACTGTTGNCCANTTGTTTCTTTTGATTAATTAANTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGNCCCTGTAAGGTTTTGTTTGTTTAANCCCTTCTACAANNGGATCGAGGGGGATTTGGANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU164396             [GTGTGTTTGTTCCCGTGTTGTTGCCGTGGCCACTGCGNTCNCTTANTATTANCCATGTCTACTGTCNCATTGTATTAGCTACTACTGTTGNCCANTTGTTTCTTTTGATTAATTAANTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGNCCCTGTAAGGTTTTGTTTGTTTAANCCCTTCTACAANNGGATCGAGGGGGATTTGGANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11485#2
GTGTGTTTGTTCCCGTGTTGTTGCCGTGGCCACTGCGNTCNCTTANTATTANCCATGTCT
ACTGTCNCATTGTATTAGCTACTACTGTTGNCCANTTGTTTCTTTTGATTAATTAANTTG
CTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGNCCCTGTAAGGTTTTGTTTGTTTA
ANCCCTTCTACAANNGGATCGAGGGGGATTTGGANAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      ACAAAGTCAAACGGTTTCNACCGATCACTAGAGGATATCCTGGTCGCGCGGACCCCCACA 60
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      AATAACGTAGGGACATCACCTAATGCTTCTTTCCCCCACCCGTTTTTNCTTCCCCCTCTC 120
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      CTCACCTCTCCTCTCGATCGCNTCCGCTGCCACCCTCCACCATTCTCATTCCCCCACCCC 180
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      TCCCCCCTCGCGAGCCATGGCTGCCGCCGCCGCTGTAAGGTCCGTGGCGATCTCGCTCTT 240
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      CGTCGTCGCCCTCGCCGTGGCAGCGTTCGCCTGGTCCCCGTCGTCGCTGGCGGGCGGCGC 300
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      CAGCCACCACCTGCGGCTGGAGGAGGTGGCCAGCGCCGCCGGCGCCGGCGCGGCGGGGCA 360
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      TGGCAGCATGTCGGCGGCCGCCGGGAAGGACGGTGGCGCCAGCGCGGCGGCGCATGGTAG 420
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      CGCGCCGGCGGCCGCCGGGATAGAAAGAACGGGTACCTCAGCTTCTTCGCCGCCATGCGC 480
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      CGCGACAGCGTGCCGTGCACCCGCAAAGGCGCCAGCTACTACAACTGCGTCCCCGGCGCG 540
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      CCGCCCAGCCCGTACAACCGCAGCTGCGAGCACATCACCCGCTGCCACGGCTGATCGATC 600
                                                                                   

consensus_11485#1      ------------------------------------------------------------
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      ACACCATCGCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCTGCCGGTGCCGGCGC 660
                                                                                   

consensus_11485#1      -----------------------------------------------------ATGCATA 7
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      CGGCGATGATGATTCGCTTTGTTTCTTTGACGACGACGACGATGTGCACGCATATGCATA 720
                                                                                   

consensus_11485#1      TGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGAC 67
consensus_11485#2      ------------------------------------------------------------
consensus_11485#0      TGCGTGCTAGCGTTTTGTCGATGGATCGATCGATCACCAGGTTAATTAAATAAAAATGAC 780
                                                                                   

consensus_11485#1      ATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTG-CCACTGCGTTCTCTT 126
consensus_11485#2      ----------------GTGTGTTTGTTCCCGTGTTGTTGCCGTGGCCACTGCGNTCNCTT 44
consensus_11485#0      ATGAAATAAGGTGTGTGTGTGTTTGTTCTCGTGTTGTTGCCGTG-CCACTGCGTTCTCTT 839
                                       ************ *************** ******** ** ***

consensus_11485#1      ATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGTTTCTT 186
consensus_11485#2      ANTATTANCCATGTCTACTGTCNCATTGTATTAGCTACTACTGTTGNCCANTTGTTTCTT 104
consensus_11485#0      ATTATTATCCATGTCTACTGTCTCATTGTATTAGCTACTACTGTTGTCCATTTGGTTCTT 899
                       * ***** ************** *********************** *** *** *****

consensus_11485#1      TTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTA 246
consensus_11485#2      TTGATTAATTAANTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGNCCCTGTA 164
consensus_11485#0      TTGATTAATTAATTTGCTGCTAATGATGCAGCTATTGTATTTGGGATTTTTGTCCCTGTA 959
                       ************ *************************************** *******

consensus_11485#1      AGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTAA 306
consensus_11485#2      AGGTTTTGTTTGTTTAANCCCTTCTACAANNGGATCGAGGGGGATTTGGANAAAAAAAAA 224
consensus_11485#0      AGGTTTTGTTTGTTTAATCCCTTCTACAAGAGGATCGAGGGGGATTTGGACAGGACTTAT 1019
                       ***************** ***********  ******************* *  *   * 

consensus_11485#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------------- 337
consensus_11485#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------- 256
consensus_11485#0      TTCACAACTATTGTATGGTGTGGAATTATTCTCCTTCAATCCCCTCCATTCTCCTTTTCT 1079
                          * **  *    *        **  *                                

consensus_11485#1      -----------------------------------------
consensus_11485#2      -----------------------------------------
consensus_11485#0      TGAGGATTAAATGAACAAGGTCTAAATTAAGCCGATTTCAT 1120