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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11487#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2873 fasta sequence
[TCGTCTCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATACAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGCGACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGGCCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAGGCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGGGGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACGTCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGGAACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTCGTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCGCTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGACGAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTGGAGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATGGTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTTGAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATACTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTGTTGCTTTAGCAACTTGGTAACTTGTCTAAAATGGCA]
[+] EMBL AK111629 [TCGTCTCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATACAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGCGACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGGCCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAGGCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGGGGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACGTCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGGAACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTCGTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCGCTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGACGAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTGGAGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATGGTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTTGAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATACTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTGTTGCTTTAGCAACTTGGTAACTTGTCTAAAATGGCA]
[+] EMBL AK098897 [ TCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATACAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGCGACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGGCCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAGGCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGGGGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACGTCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGGAACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTCGTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCGCTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGACGAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTGGGGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATGGTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTTGAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATACTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTT ]
[+] EMBL CB640667 [ ATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTAC ]
[+] EMBL CB650728 [ ATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTC ]
[+] EMBL AK112036 [ ACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTG ]
[+] EMBL CB631488 [ AAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTANGAC ]
[-] EMBL CB631489 [ ACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTTTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACTAGCAAATGATAGCATTTTTGTTGCTTTAG ]
[-] EMBL CB650729 [ AGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTGTTGCTTTAG ]
consensusID : consensus_11487#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 325 fasta sequence
[TCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATC]
[+] EMBL BU572314 [TCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11487#0 TCGTCTCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATA 60
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGC 120
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGG 180
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAG 240
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGG 300
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACG 360
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 TCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGG 420
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 AACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTC 480
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCG 540
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGAC 600
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTG 660
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GAGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATG 720
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTT 780
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATA 840
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCC 900
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCAC 960
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 TGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAG 1020
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 ACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAA 1080
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCT 1140
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACAC 1200
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGA 1260
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 TGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACT 1320
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATT 1380
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTG 1440
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 ATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCA 1500
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATT 1560
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACA 1620
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 ATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCA 1680
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 ATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAG 1740
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 AAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCT 1800
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 TCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGA 1860
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 ATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTT 1920
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 TTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTG 1980
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGT 2040
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 GATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTC 2100
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 ATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAG 2160
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 AAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCT 2220
consensus_11487#1 --------------------------TCCATTGTGGATGGAGGATGGAGAGGTCGATGCT 34
**********************************
consensus_11487#0 TCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCA 2280
consensus_11487#1 TCAGCATCCCCTCATAAGGAGACAGATACACAGATCAT---------------------- 72
**************************************
consensus_11487#0 AGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAG 2340
consensus_11487#1 -----------GCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAG 121
*************************************************
consensus_11487#0 CTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCG 2400
consensus_11487#1 CTC---------------------------------TTAGGACACTCCTACATGAAGGCG 148
*** ************************
consensus_11487#0 AAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGG 2460
consensus_11487#1 AAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGG 208
************************************************************
consensus_11487#0 AGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTG 2520
consensus_11487#1 AGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTG 268
************************************************************
consensus_11487#0 GGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCC 2580
consensus_11487#1 GGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATC--- 325
*********************************************************
consensus_11487#0 ATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAG 2640
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 CACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTT 2700
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 TTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCT 2760
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 TTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGC 2820
consensus_11487#1 ------------------------------------------------------------
consensus_11487#0 AAATGATAGCATTTTTGTTGCTTTAGCAACTTGGTAACTTGTCTAAAATGGCA 2873
consensus_11487#1 -----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||