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Oryza sativa
cluster # 11491 cluster # 11491       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11491#0 length = 1681 sequences # 2  
consensus_11491#1 length = 1447 sequences # 7  

consensusID : consensus_11491#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1681
fasta sequence
                              [AGGTGATAGGGTTTAGGATTACCCCCAACGTTTTATTTTTGTAAAGAAAATAGGGGATTGCTCGATGTTGTCTGTCTATGTAGCAGTATGATTTCTGGTCTGGAATGCATGCCATAGTTGTTCTAGATTTATTTTAGATAATGAGTAGTTGACTCTAGTAGTTTAGTTAGCCTTGCAACGATCTCTGATTGATTCAGAGTTCTGTGCCTGAAATTCCTTGTTGGCTATTTATCCTTTTCTGGGTGTTTGTTGTTTCAAATAGTTTCCAAGTATTTCTTTTGAGAGAAGAACTTGAGATTTTGTGGGAAGCAAATGCTTTTGATTAGTGCCTACAAATTGACGCTAATGTTTCCTTTGTTTTGCAAAGGAAAGCGCATGTACAATCCTCATGTATTTTTATTAATTTTTCCCTTACAGAGGTCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGAATGGGACTTCGAAGGAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTTCGTCCTGGATGCTCTGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTTGGCTTCTGGACTAAAGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCTCCAGAGTTACACTGGGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAGTACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGGAGGTGAAGCTGCAAATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACTTATTACCCGTCATTTTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAGCTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCGAGTTCCACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGCTTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTGTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAATTGCTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTCCAGGTTAAAAAAAAA]

[+] EMBL AK070635             [AGGTGATAGGGTTTAGGATTACCCCCAACGTTTTATTTTTGTAAAGAAAATAGGGGATTGCTCGATGTTGTCTGTCTATGTAGCAGTATGATTTCTGGTCTGGAATGCATGCCATAGTTGTTCTAGATTTATTTTAGATAATGAGTAGTTGACTCTAGTAGTTTAGTTAGCCTTGCAACGATCTCTGATTGATTCAGAGTTCTGTGCCTGAAATTCCTTGTTGGCTATTTATCCTTTTCTGGGTGTTTGTTGTTTCAAATAGTTTCCAAGTATTTCTTTTGAGAGAAGAACTTGAGATTTTGTGGGAAGCAAATGCTTTTGATTAGTGCCTACAAATTGACGCTAATGTTTCCTTTGTTTTGCAAAGGAAAGCGCATGTACAATCCTCATGTATTTTTATTAATTTTTCCCTTACAGAGGTCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGAATGGGACTTCGAAGGAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTTCGTCCTGGATGCTCTGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTTGGCTTCTGGACTAAAGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCTCCAGAGTTACACTGGGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAGTACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGGAGGTGAAGCTGCAAATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACTTATTACCCGTCATTTTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAGCTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCGAGTTCCACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGCTTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTGTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAA                                                                             ]
[+] EMBL CB000209             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TATCTTGCTCAATTGATTCGAGCAGTGAGATTCTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTGTGAGCATTGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAATTGCTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTCCAGGTTAAAAAAAAA]


>consensus_11491#0 AGGTGATAGGGTTTAGGATTACCCCCAACGTTTTATTTTTGTAAAGAAAATAGGGGATTG CTCGATGTTGTCTGTCTATGTAGCAGTATGATTTCTGGTCTGGAATGCATGCCATAGTTG TTCTAGATTTATTTTAGATAATGAGTAGTTGACTCTAGTAGTTTAGTTAGCCTTGCAACG ATCTCTGATTGATTCAGAGTTCTGTGCCTGAAATTCCTTGTTGGCTATTTATCCTTTTCT GGGTGTTTGTTGTTTCAAATAGTTTCCAAGTATTTCTTTTGAGAGAAGAACTTGAGATTT TGTGGGAAGCAAATGCTTTTGATTAGTGCCTACAAATTGACGCTAATGTTTCCTTTGTTT TGCAAAGGAAAGCGCATGTACAATCCTCATGTATTTTTATTAATTTTTCCCTTACAGAGG TCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGAATGGGACTTCGAAG GAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTTCGTCCTGGATGCTC TGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTTGGCTTCTGGACTAA AGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCTCCAGAGTTACACTG GGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAG TACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGGAGGTGAAGCTGCAA ATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACTTATTACCCGTCATT TTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAG CTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCGAGTTCC ACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGC TTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTG TGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAA TGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTAT GGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATAT ATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCA ACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACA AAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAG AACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACT TGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACC ATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAATTG CTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTCCAGGTTAAAAAAAA A



consensusID : consensus_11491#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1447
fasta sequence
                              [CCCCCAACCCCGCGCTCCCCTCATTGCCTTATCCGAATCGCCTCGCCGTCTCCGTCTCGCCATGGAGGCCGTGCGCGCGTCGGCGGCGTGGGTGGCCAGCCGCTCCTCCCACGTCAAGGTCGACATGTTAGAGGTCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGAATGGGACTTCGAAGGAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTTCGTCCTGGATGCTCTGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTTGGCTTCTGGACTAAAGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCTCCAGAGTTACACTGGGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAGTACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGGAGGTGAAGCTGCAAATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACTTATTACCCGTCATTTTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAGCTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCGAGTTCCACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGCTTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTGTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAATTGCTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTCCAGGTTAGATGAATTCTGCAGATCGATGANCATTCACATACTCCTGGNGNCTGCTCCCCTGGTAAAG]

[+] EMBL AK103183             [CCCCCAACCCCGCGCTCCCCTCATTGCCTTATCCGAATCGCCTCGCCGTCTCCGTCTCGCCATGGAGGCCGTGCGCGCGTCGGCGGCGTGGGTGGCCAGCCGCTCCTCCCACGTCAAGGTCGACATGTTAGAGGTCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGAATGGGACTTCGAAGGAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTTCGTCCTGGATGCTCTGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTTGGCTTCTGGACTAAAGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCTCCAGAGTTACACTGGGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAGTACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGGAGGTGAAGCTGCAAATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACTTATTACCCGTCATTTTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAGCTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCGAGTTCCACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGCTTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTGTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAATTGCTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTCCAGGTTAGATGAATTCTGCAGATCG                                          ]
[+] EMBL CF332227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TACTCTAATCGAACTTATTACCCGTCATTTTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAGCTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCAAGTCCCACGACATCGAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGCTTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTGTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTTTGGGGAGTGCACAAAAGTGC                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA765948             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTGTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAA  CTCTACCACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCAGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGTGCGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCANGAAATTGCTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTT                                                                       ]
[+] EMBL CB096730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGNGAGANTGNGCNNGGNAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCGGTATATGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTATGGCTCTGGNCATGTGGCGTTCAGAACATGGCGTNGNGNCATCACCGCACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCAA  CTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCAGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGCGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGNGTTTTTCATTGATCTTGNCAAACCATTCTGTAGAGTACTGNGGTATTCTCAAACTCAACAACTGCAACGGTCATCAGGAAATTGCTACTGTNGCAAGAAGAGGTACTAGCTGNAACAGGNGAGCTTTGTCCANGGTAGATGAATTCTGCAGATCGATGANCATTCACATACTCCTGGNGNCTGCTCCCCTGGTAAAG]
[-] EMBL CF332228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCTTCTGAGCATTGACATCGATCTATGGCTTTGGTCATGTGGCGTTCAGAACATGGAGTTGTCACATCACCGCACCCTATCAATATATTACTGAGAGCCAGCAGCTGGTGGTGGGCGCCCCCTCGGTCCAGTGTATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF332466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGTTCGTCCAGATTCTGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTCTGCAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAAaa                                                                                                                  ]
[-] EMBL CF332465             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTCGTCCAGATTTTGAGACAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACCATTTTGCAGAGTACTGTGTTATTTTCAAACTCAACAACTGCAAAGTTCATCAGGAAAaaa                                                                                                                 ]


>consensus_11491#1 CCCCCAACCCCGCGCTCCCCTCATTGCCTTATCCGAATCGCCTCGCCGTCTCCGTCTCGC CATGGAGGCCGTGCGCGCGTCGGCGGCGTGGGTGGCCAGCCGCTCCTCCCACGTCAAGGT CGACATGTTAGAGGTCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGA ATGGGACTTCGAAGGAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTT CGTCCTGGATGCTCTGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTT GGCTTCTGGACTAAAGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCT CCAGAGTTACACTGGGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAAT TGAGGAGGAAAGAGTACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGG AGGTGAAGCTGCAAATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACT TATTACCCGTCATTTTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTT CTTGTATAAGAGAGCTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAA CTATGGCGAGTTCCACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGC TGTCTTGAGGGAGCTTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTC GAGCAGTGAGATTGTGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATA TGCCGTGGAAAAAATGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCAT TGACATCGATCTATGGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCG CACCCTCTCAATATATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGT GTATTGTTCCAGCAACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCT CTTGGGAGTGCACAAAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGA CAAGAAATCTTTAGAACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTG CAATTGGATGCACTTGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATT GATCTTGCCAAACCATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGT TCATCAGGAAATTGCTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTC CAGGTTAGATGAATTCTGCAGATCGATGANCATTCACATACTCCTGGNGNCTGCTCCCCT GGTAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11491#0      AGGTGATAGGGTTTAGGATTACCCCCAACGTTTTATTTTTGTAAAGAAAATAGGGGATTG 60
consensus_11491#1      ------------------------------------------------------------
                                                                                   

consensus_11491#0      CTCGATGTTGTCTGTCTATGTAGCAGTATGATTTCTGGTCTGGAATGCATGCCATAGTTG 120
consensus_11491#1      ------------------------------------------------------------
                                                                                   

consensus_11491#0      TTCTAGATTTATTTTAGATAATGAGTAGTTGACTCTAGTAGTTTAGTTAGCCTTGCAACG 180
consensus_11491#1      ------------------------------------------------------------
                                                                                   

consensus_11491#0      ATCTCTGATTGATTCAGAGTTCTGTGCCTGAAATTCCTTGTTGGCTATTTATCCTTTTCT 240
consensus_11491#1      ------------------------------------------------------------
                                                                                   

consensus_11491#0      GGGTGTTTGTTGTTTCAAATAGTTTCCAAGTATTTCTTTTGAGAGAAGAACTTGAGATTT 300
consensus_11491#1      ------------------------------------CCCCCAACCCCGCGCTCCCCTCAT 24
                                                                *     *  **       *

consensus_11491#0      TGTGGGAAGCAAATGCTTTTGATTAGTGCCTACAAATTGACGCTAATGTTTCCTTTGTTT 360
consensus_11491#1      TGCCTTATCCGAATCGCCTCGCC----GTCTCCGTCTCGCCATGGAGGCCGTGCGCGCGT 80
                       **    *  * ***    * *      * ** *   * * *    * *        *  *

consensus_11491#0      TGCAAAGGAAAGCGCATGTACAATCCTCATGTATTTTTATTAATTTTTCCCTTACAGAGG 420
consensus_11491#1      CGGCGGCGTGGGTGGCCAGCCGCTCCTCCCACGTCAAGGTCGACATGTT------AGAGG 134
                        *     *   * *      *  *****     *     *  *  * *       *****

consensus_11491#0      TCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGAATGGGACTTCGAAG 480
consensus_11491#1      TCGAGAAGGTGGTGGACAAAATCCAAGGAAATGTTCCAAAAGTTGAATGGGACTTCGAAG 194
                       ************************************************************

consensus_11491#0      GAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTTCGTCCTGGATGCTC 540
consensus_11491#1      GAATTCACTATTTTGACGATGGCCCCCTCACTGTCCAGTACCTCTTCGTCCTGGATGCTC 254
                       ************************************************************

consensus_11491#0      TGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTTGGCTTCTGGACTAA 600
consensus_11491#1      TGAACTTCTGCTTCTGGCCAGATAAGGATCTGAGCTATGACCATTTGGCTTCTGGACTAA 314
                       ************************************************************

consensus_11491#0      AGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCTCCAGAGTTACACTG 660
consensus_11491#1      AGTTAGCCTTAGAGAAAGATAAGACAGCCCTTGATGCAGATCGTCTCCAGAGTTACACTG 374
                       ************************************************************

consensus_11491#0      GGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAG 720
consensus_11491#1      GGCCTCAGCTCCGCCAACTGCTGAACTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAG 434
                       ************************************************************

consensus_11491#0      TACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGGAGGTGAAGCTGCAA 780
consensus_11491#1      TACGGCTTCTTCATGAGGTTGGTATGGAACTTGAAAGAAGCTTTGGAGGTGAAGCTGCAA 494
                       ************************************************************

consensus_11491#0      ATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACTTATTACCCGTCATT 840
consensus_11491#1      ATCTAGTGAAGTCTGCTGGAAACTCTGCTGCTACTCTAATCGAACTTATTACCCGTCATT 554
                       ************************************************************

consensus_11491#0      TTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAG 900
consensus_11491#1      TTCCTGGTTTTCGGGATCATTCACTTTACAAAGGACACCAGGTTTTCTTGTATAAGAGAG 614
                       ************************************************************

consensus_11491#0      CTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCGAGTTCC 960
consensus_11491#1      CTCAGATATTTGTTGCTGATCTGTGGGGTGCTTTTAAGGGACAAAACTATGGCGAGTTCC 674
                       ************************************************************

consensus_11491#0      ACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGC 1020
consensus_11491#1      ACGACATCAAGTCCATCACCATATTTGCAGACTATATTGTTCCTGCTGTCTTGAGGGAGC 734
                       ************************************************************

consensus_11491#0      TTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTG 1080
consensus_11491#1      TTGGCATACTGAAATATGGCTCCAACTTATCTTGCTCAATTGATTCGAGCAGTGAGATTG 794
                       ************************************************************

consensus_11491#0      TGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAA 1140
consensus_11491#1      TGCCTGGAAGTGAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTATATGCCGTGGAAAAAA 854
                       ************************************************************

consensus_11491#0      TGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTAT 1200
consensus_11491#1      TGAGAGAGCTCATCAACAAGAAGTTTGGAAAGCAGCTTCTGAGCATTGACATCGATCTAT 914
                       ************************************************************

consensus_11491#0      GGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATAT 1260
consensus_11491#1      GGCTCTGGTCATGTGGCGTTCAGAACATGGCGTTGTCACATCACCGCACCCTCTCAATAT 974
                       ************************************************************

consensus_11491#0      ATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCA 1320
consensus_11491#1      ATTACTGAGAGCCAGCAGCTGCTGCTGGGCGCCCCCTCCGTCCAGTGTATTGTTCCAGCA 1034
                       ************************************************************

consensus_11491#0      ACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACA 1380
consensus_11491#1      ACTCTCTACTACTAGTAGCTGCTATAGCTACTGAATTTTTGTCCCTCTTGGGAGTGCACA 1094
                       ************************************************************

consensus_11491#0      AAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAG 1440
consensus_11491#1      AAAGTGCACGCTATTGTAGACTTGTTGGTTCGTCCAGATTCTGAGACAAGAAATCTTTAG 1154
                       ************************************************************

consensus_11491#0      AACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACT 1500
consensus_11491#1      AACAGCTCAAAGTTTCCAGTTGACCTGTAGGGTGTAGTAGGGTGTGCAATTGGATGCACT 1214
                       ************************************************************

consensus_11491#0      TGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACC 1560
consensus_11491#1      TGGACTAGAATTCAGAACCATTCTGTAGAGTACTGTGTTTTTCATTGATCTTGCCAAACC 1274
                       ************************************************************

consensus_11491#0      ATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAATTG 1620
consensus_11491#1      ATTCTGTAGAGTACTGTGTTATTCTCAAACTCAACAACTGCAAAGTTCATCAGGAAATTG 1334
                       ************************************************************

consensus_11491#0      CTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTCCAGGTTAAAAAAAA 1680
consensus_11491#1      CTACTGTAGCAAGAAGAGGTACTAGCTGTAACAGGTGAGCTTTGTCCAGGTTAGATGAAT 1394
                       ***************************************************** *  ** 

consensus_11491#0      A---------------------------------------------------- 1681
consensus_11491#1      TCTGCAGATCGATGANCATTCACATACTCCTGGNGNCTGCTCCCCTGGTAAAG 1447
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)