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Oryza sativa
cluster # 11493 cluster # 11493       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11493#0 length = 1323 sequences # 4  
consensus_11493#1 length = 1144 sequences # 1  
consensus_11493#2 length = 323 sequences # 4  

consensusID : consensus_11493#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1323
fasta sequence
                              [ATCACTTGTCATGGAGCTTCTGACTCATCTTTACTAGGAAGGGTCTTTTCAAGCCCTTGTTGTGTCTGTCCCTTCCTTACATCACATCCATCCCCATGCTTGCTTTCCTGATTTCTTAATTCGCATCATTTCGGCATTTCCATTGCTAGGGTTTCTTGGAGATCCAACCCGGGAAGCAACTGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTGCTGATGGCGTCGCGCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTCGCGCGCTCCGGCCTCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCCAAGATCGAGGAGATCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCGTTCCTGACGCACCACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCT-CCCCGG-ACATGGTGT-CCGTGCT-CCTCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACGCCGCTCGACGTGCTCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGT-GCCGGGGCTGACGCACATCGAGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTGATGGTGACCACGCGTGACGACGGCGCGCCTGT-CACCGGCGG-CGCCGAGGCCGGCGGAAGCGACGGCGGCAACTTCCCGAGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCT-CATGTACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAATAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGTTGACAAGATGAGCAGCAAATGGTGTAGCTAGCTACTATATAGCTAGGAT-AATGGGCAACAATTTAGTGGTATTTGATGTGGATTGTTCGATCTTTCGCATGATTGA-TTCGCTTGCGCGCGCAGCAAAAA]

[+] EMBL AK060933             [ATCACTTGTCATGGAGCTTCTGACTCATCTTTACTAGGAAGGGTCTTTTCAAGCCCTTGTTGTGTCTGTCCCTTCCTTACATCACATCCATCCCCATGCTTGCTTTCCTGATTTCTTAATTCGCATCATTTCGGCATTTCCATTGCTAGGGTTTCTTGGAGATCCAACCCGGGAAGCAACTGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTGCTGATGGCGTCGCGCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTCGCGCGCTCCGGCCTCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCCAAGATCGAGGAGATCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCGTTCCTGACGCACCACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCT CCCCGG ACATGGTGT CCGTGCT CCTCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACGCCGCTCGACGTGCTCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGT GCCGGGGCTGACGCACATCGAGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTGATGGTGACCACGCGCGACGACGGTGCGCCTGT CACCGGAGG    CGAGGCCGGCGGAAGCGACGGCGGCAACTTCCCGCGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCT AATGTACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAACAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGTTGACAAGATGAGCAGCAAATGGTGTAGCTAGCTACTATATAGCTAGGATAAATGGGCAACA                                                                      ]
[+] EMBL AU033076             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gcCGCCGGAGATGGTCTCCCCCGGAACATGGTNTCCCGTGCTGCTTCGACCACCACGCCGACCCGAACTCCAGGACGCTCGAC GCGTCACGCCGCTCGACGTGCTCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGT GCCCGGGGTGACGCACATCGAGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCANTCGGCGGTGATGGTGACCACGCGTGACGACGGCGCGCCTGT CACCGGCGG CGCCGAGGCCGGCGGAAGCGACGGCGGCAACTTCCCGAGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCT CATGTACCAGGGCCAGGAAATGGNCGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAATAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGG TTCGCATAAGTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGTTGACAAGATGAGCAGCAAATGGTGTAGCTAGCTACTATATAGCTAGGAT AATGGGCAACAATTTAGTGGTATTTGATGTGGATTGTTCGATCTTTCGCATGATTGA NTTGCTTGCGCGCGCAGCAAAAA]
[+] EMBL AU033095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cgtntcCCGCACCTTCACCTCCGA TTCCTCTTCAAGGGCCCCTTNCCCGGGGCTNACGCACATCGAGCCCAACAAGCTCAGCCTCTGCCTCGAGCTCGTGCAGTCNGCGGTGATGGTGACCACGCGTNACGACGGCGCGCCTGTCCACCGGCGGCCGCCGAGGCCGGCGGAAGCGACGGCGGCAACTTCCCGAGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCTNCATGTACCAGGGCCAGGAAATGGCCGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAATAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGG TTCGCATAAGTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGTTGACAAGATGAGCAGCAAATGGTGTAGCTAGCTACTATATAGCTAGGAT AATGGGCAACAATTTAGTGGTATTTGATGTGGATTGTTCGATCTTTCGCATGATTGANTTCG TTGCGCGCGCAGCAAAAA]
[+] EMBL AU223036             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGTGACCACGCGTGACGACGGCGCGCCTGT CACCGGCGG CGCCGAGGCCGGCGGAAGCGACGGCGGCAACTTCCCGAGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCT CATGTACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAATAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGTTGACAAGATGAGCAGCAAATGGTGTAGCTAGCTACTATATAGCTAGGAT AATGGGCAACAATTTAGTGGTATTTGATGTGGATTGTTCGATCTTTCGCATGATTGA TTCGCTTGCGCGCGCAGCAAAAA]


>consensus_11493#0 ATCACTTGTCATGGAGCTTCTGACTCATCTTTACTAGGAAGGGTCTTTTCAAGCCCTTGT TGTGTCTGTCCCTTCCTTACATCACATCCATCCCCATGCTTGCTTTCCTGATTTCTTAAT TCGCATCATTTCGGCATTTCCATTGCTAGGGTTTCTTGGAGATCCAACCCGGGAAGCAAC TGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTGCTGATGGCGTCGC GCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTCGCGCGCTCCGGCC TCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCCAAGATCGAGGAGA TCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCGTTCCTGACGCACC ACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAACAAGATCCGGCGCA TGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATGGTCATGGGCGAGG GCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCACTGCAACCGCGACG TCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGCGCCGGCCCGACAG GCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGCTCC TCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACGCCGCTCGACGTGC TCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGTGCCGGGGCTGACGCACATCG AGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTGATGGTGACCACGC GTGACGACGGCGCGCCTGTCACCGGCGGCGCCGAGGCCGGCGGAAGCGACGGCGGCAACT TCCCGAGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCTCATGT ACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAATAACG GCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTAT TCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGTTGACAA GATGAGCAGCAAATGGTGTAGCTAGCTACTATATAGCTAGGATAATGGGCAACAATTTAG TGGTATTTGATGTGGATTGTTCGATCTTTCGCATGATTGATTCGCTTGCGCGCGCAGCAA AAA



consensusID : consensus_11493#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1144
fasta sequence
                              [GAAGAAAGTACTACATGCTAAGAACAACATTTCATGCTGCTAATTAGCTGCCGTGCATTTGGGGTGATTAATTAAGCATCTTAATTGAACTAACGGCGAGTTGCACAATGCAATGTGTTGATGCAGAAGCAACTGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTGCTGATGGCGTCGCGCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTCGCGCGCTCCGGCCTCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCCAAGATCGAGGAGATCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCGTTCCTGACGCACCACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGCTCCTCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACGCCGCTCGACGTGCTCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGTGCCGGGGCTGACGCACATCGAGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTGATGGTGACCACGCGCGACGACGGTGCGCCTGTCACCGGAGGCGAGGCCGGCGGGAGCGACGGCGGCAACTTCCCGCGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCTAATGTACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAACAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGT]

[-] EMBL AK107475             [GAAGAAAGTACTACATGCTAAGAACAACATTTCATGCTGCTAATTAGCTGCCGTGCATTTGGGGTGATTAATTAAGCATCTTAATTGAACTAACGGCGAGTTGCACAATGCAATGTGTTGATGCAGAAGCAACTGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTGCTGATGGCGTCGCGCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTCGCGCGCTCCGGCCTCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCCAAGATCGAGGAGATCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCGTTCCTGACGCACCACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGCTCCTCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACGCCGCTCGACGTGCTCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGTGCCGGGGCTGACGCACATCGAGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTGATGGTGACCACGCGCGACGACGGTGCGCCTGTCACCGGAGGCGAGGCCGGCGGGAGCGACGGCGGCAACTTCCCGCGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCTAATGTACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAACAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGT]


>consensus_11493#1 GAAGAAAGTACTACATGCTAAGAACAACATTTCATGCTGCTAATTAGCTGCCGTGCATTT GGGGTGATTAATTAAGCATCTTAATTGAACTAACGGCGAGTTGCACAATGCAATGTGTTG ATGCAGAAGCAACTGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTG CTGATGGCGTCGCGCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTC GCGCGCTCCGGCCTCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCC AAGATCGAGGAGATCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCG TTCCTGACGCACCACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAAC AAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATG GTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCAC TGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGC GCCGGCCCGACAGGCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCTCCCCGGACATG GTGTCCGTGCTCCTCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACG CCGCTCGACGTGCTCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGTGCCGGGG CTGACGCACATCGAGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTG ATGGTGACCACGCGCGACGACGGTGCGCCTGTCACCGGAGGCGAGGCCGGCGGGAGCGAC GGCGGCAACTTCCCGCGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCG ACGCTAATGTACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAA AGCAACAACGGCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAA GTAATATTATTCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCA TGGT



consensusID : consensus_11493#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 323
fasta sequence
                              [TTTCTTTTTCCTCTTGCAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAACTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTCCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTGGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGC-TGCTCGACCACCACGCCGACCNGAACTTCAGGACGNTCGACGGCGTAACGCGNT]

[+] EMBL OSS3481A             [TTTCTTTTTCCTCTTGCAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAACTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTCCACTACGCCGTGCAGCACTGCAACCGCNACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTGGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTNC TGCTCGACCACCACGCCGACCNGAACTTCAGGACGNTCGACGGCGTAACGCGNT]
[+] EMBL OSS2861A             [TTTCTTTTTCCTCTTGCAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAACTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTCCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTGGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGCTTGCTCGACCACCACGTCGACCCGAACTTCAGGACGc                  ]
[+] EMBL OSS3060A             [TTTCTTTTTCCTCTTGCAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAACTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTCCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCGACGTCAACTCCCGCGCCGGCCCGACA GCAAAACCGCCCTGCACCTGGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGC TGCTC                                                 ]
[+] EMBL OSS2556A             [TTTCTTTTTCCTCTTGCAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAACTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCGTCCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCNACGTCAACTCCCGCGCCGGCCCGACA GCAAAACCGCCCTGCACCTGGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGC TGCTC                                                 ]


>consensus_11493#2 TTTCTTTTTCCTCTTGCAACAAGATCCGGCGCATGCGGCGCGCCCTCGACGCCGCCGACA TCGAGCTCGTCAAACTGATGGTCATGGGCGAGGGCCTGGACCTCGACGACGCGCTCGCCG TCCACTACGCCGTGCAGCACTGCAACCGCGACGTCGTCAAGGCGCTGCTCGAGCTCGGCG CCGCGACGTCAACTCCCGCGCCGGCCCGACAGGCAAAACCGCCCTGCACCTGGCGGCGGA GATGGTCTCCCCGGACATGGTGTCCGTGCTGCTCGACCACCACGCCGACCNGAACTTCAG GACGNTCGACGGCGTAACGCGNT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11493#1      -----------------------------------------------GAAGAAAGTACTA 13
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      ATCACTTGTCATGGAGCTTCTGACTCATCTTTACTAGGAAGGGTCTTTTCAAGCCCTTGT 60
                                                                                   

consensus_11493#1      CATGCTAAGAACAACATTTCATGCTGCTAATTAGCTGCCGTGCATTTGGGGTGATTAATT 73
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TGTGTCTGTCCCTTCCTTACATCACATCCATCCCCATGCTTGCTTTCCTGATTTCTTAAT 120
                                                                                   

consensus_11493#1      AAGCATCTTAATTGAACTAACGGCGAGTTGCACAATGCAATGTGTTGATGCAGAAGCAAC 133
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TCGCATCATTTCGGCATTTCCATTGCTAGGGTTTCTTGGAGATCCAACCCGGGAAGCAAC 180
                                                                                   

consensus_11493#1      TGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTGCTGATGGCGTCGC 193
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TGGAGAGCATGGTGAAGGAGGCGTCGGTGGACGACGTGATGAAGGTGCTGATGGCGTCGC 240
                                                                                   

consensus_11493#1      GCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTCGCGCGCTCCGGCC 253
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      GCAAGTTCGAGATGCAGGAGCTGTGGGCGACTTGCTCCCACCTCGTCGCGCGCTCCGGCC 300
                                                                                   

consensus_11493#1      TCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCCAAGATCGAGGAGA 313
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TCTCCGCCGATCTCCTCGCCAAGCACCTCCCCATCGATGTGGTGGCCAAGATCGAGGAGA 360
                                                                                   

consensus_11493#1      TCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCGTTCCTGACGCACC 373
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TCCGCGCCAAGTCGCCGCTCGCCGCGGCGGCCGCGCCGCGCTCGCCGTTCCTGACGCACC 420
                                                                                   

consensus_11493#1      ACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAACAAGATCCGGCGCA 433
consensus_11493#2      ---------------------------TTTCTTTTTCCTCTTGCAACAAGATCCGGCGCA 33
consensus_11493#0      ACTACCTCCCCATGAACCCGGCGTCCTCCGCGGCGGACCGCGACAACAAGATCCGGCGCA 480
                                                     *      *     *****************

consensus_11493#1      TGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATGGTCATGGGCGAGG 493
consensus_11493#2      TGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAACTGATGGTCATGGGCGAGG 93
consensus_11493#0      TGCGGCGCGCCCTCGACGCCGCCGACATCGAGCTCGTCAAGCTGATGGTCATGGGCGAGG 540
                       **************************************** *******************

consensus_11493#1      GCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCACTGCAACCGCGACG 553
consensus_11493#2      GCCTGGACCTCGACGACGCGCTCGCCGTCCACTACGCCGTGCAGCACTGCAACCGCGACG 153
consensus_11493#0      GCCTGGACCTCGACGACGCGCTCGCCGTGCACTACGCCGTGCAGCACTGCAACCGCGACG 600
                       **************************** *******************************

consensus_11493#1      TCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGCGCCGGCCCGACAG 613
consensus_11493#2      TCGTCAAGGCGCTGCTCGAGCTCGGCGCCGC-GACGTCAACTCCCGCGCCGGCCCGACAG 212
consensus_11493#0      TCGTCAAGGCGCTGCTCGAGCTCGGCGCCGCCGACGTCAACTCCCGCGCCGGCCCGACAG 660
                       ******************************* ****************************

consensus_11493#1      GCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGCTCC 673
consensus_11493#2      GCAAAACCGCCCTGCACCTGGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGCTGC 272
consensus_11493#0      GCAAAACCGCCCTGCACCTTGCGGCGGAGATGGTCTCCCCGGACATGGTGTCCGTGCTCC 720
                       ******************* ************************************** *

consensus_11493#1      TCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACGCCGCTCGACGTGC 733
consensus_11493#2      TCGACCACCACGCCGACCNGAACTTCAGGACGNTCGACGGCGTAACGCGNT--------- 323
consensus_11493#0      TCGACCACCACGCCGACCCGAACTCCAGGACGCTCGACGGCGTCACGCCGCTCGACGTGC 780
                       ****************** ***** ******* ********** ****            

consensus_11493#1      TCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGTGCCGGGGCTGACGCACATCG 793
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TCCGCAGCCTCACCTCCGAGTTCCTCTTCAAGGGCGCCGTGCCGGGGCTGACGCACATCG 840
                                                                                   

consensus_11493#1      AGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTGATGGTGACCACGC 853
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      AGCCCAACAAGCTCAGGCTCTGCCTCGAGCTCGTGCAGTCGGCGGTGATGGTGACCACGC 900
                                                                                   

consensus_11493#1      GCGACGACGGTGCGCCTGTCACCGGAGGCG---AGGCCGGCGGGAGCGACGGCGGCAACT 910
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      GTGACGACGGCGCGCCTGTCACCGGCGGCGCCGAGGCCGGCGGAAGCGACGGCGGCAACT 960
                                                                                   

consensus_11493#1      TCCCGCGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCTAATGT 970
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TCCCGAGGAGCGACGCCGACGACAGCTTGGTGAGCCTGACGATGAACTCGACGCTCATGT 1020
                                                                                   

consensus_11493#1      ACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAACAACG 1030
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      ACCAGGGCCAGGAAATGGCGGCGGCCGTGGCCGCCGGCGAGGGGAGGAAAAGCAATAACG 1080
                                                                                   

consensus_11493#1      GCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTAT 1090
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      GCCGAGGGAGCCCGCCGCCCGCCATGTACTTCCCCAATGGCTTCGCATAAGTAATATTAT 1140
                                                                                   

consensus_11493#1      TCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGT------ 1144
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TCCCTATCCTTCTCTTCTACTAGCCGTGTTGAGATTTGTGGGGTTATGCATGGTTGACAA 1200
                                                                                   

consensus_11493#1      ------------------------------------------------------------
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      GATGAGCAGCAAATGGTGTAGCTAGCTACTATATAGCTAGGATAATGGGCAACAATTTAG 1260
                                                                                   

consensus_11493#1      ------------------------------------------------------------
consensus_11493#2      ------------------------------------------------------------
consensus_11493#0      TGGTATTTGATGTGGATTGTTCGATCTTTCGCATGATTGATTCGCTTGCGCGCGCAGCAA 1320
                                                                                   

consensus_11493#1      ---
consensus_11493#2      ---
consensus_11493#0      AAA 1323
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)