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Oryza sativa
cluster # 11495 cluster # 11495       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11495#0 length = 1328 sequences # 2  
consensus_11495#1 length = 1235 sequences # 7  

consensusID : consensus_11495#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1328
fasta sequence
                              [TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGAGCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGTTAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAGAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTACGGTTATGGGATGTCAAAGAAAATTGCCCTGTAAGGACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCCAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGCTTGTTTGGTTGCATATATTGGATTGGATTTTGGGAACTGGGAAGACAAGCTGTACTGGGCTGATTTCAGCAACACAAGCCAGTTTGTCACACATCTGCTACCTAACAGAAATAGTTAAAAA]

[+] EMBL AK112098             [TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGAGCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGTTAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAGAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTACGGTTATGGGATGTCAAAGAAAATTGCCCTGTAAGGACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCCAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGCTTGTTTGGTTGCATATATTGGATTGGATTTTGGGAACTGGGAAGACAAGCTGTACTGGGCTGATT                                                        ]
[+] EMBL AU100713             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGCTTGTTTGGTTGCATATATTGGATTGGATTTTGGGAACTGGGAAGACAAGCTGTACTGGGCTGATTTCAGCAACACAAGCCAGTTTGTCACACATCTGCTACCTAACAGAAATAGTTAAAAA]


>consensus_11495#0 TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGA GCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGT TAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAG CTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTAT AGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAGA GAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGA TGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATAT GAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGG TTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGT TTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGC GTCTGCATCAACTGATAGCACATTACGGTTATGGGATGTCAAAGAAAATTGCCCTGTAAG GACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTA CATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACC TGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTC TTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAG TCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGA TCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCC CAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATC AGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGT TTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCA AATAAGCTTGTTTGGTTGCATATATTGGATTGGATTTTGGGAACTGGGAAGACAAGCTGT ACTGGGCTGATTTCAGCAACACAAGCCAGTTTGTCACACATCTGCTACCTAACAGAAATA GTTAAAAA



consensusID : consensus_11495#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1235
fasta sequence
                              [TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGAGCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGTTAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAAAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTAC-GGTTATGGGATGTCAAAGAAAATTGCCCTGTAAGGACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCCAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGCTTGTTTGGTTGCAAAAAAAAAAAAAAAA]

[+] EMBL AF261992             [TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGAGCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGTTAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAAAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTAC GGTTATGGGATGTCAAAGAAAATTGCCCTGTAAGGACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCCAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGCTTGTTTGGTTGCAAAAAAAAAAAAAAAA]
[+] EMBL AB040053             [TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGAGCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGTTAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAAAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTAC GGTTATGGGATGTCAAAGAAAATTGCCCTGTAAGGACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCCAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGCTTGTTTGGTTGCATAAAAAA        ]
[+] EMBL AK111614             [TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGAGCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGTTAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAAAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTAC GGTTATGGGATGTCAAAGAAAATTGCCCTGTAAGGACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCCAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGC                            ]
[+] EMBL CF304244             [TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGAGCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGTTAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAAAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C26374               [                                                                                                                                                                                                                                                                         CGCCAGAGTGTGATGGAGTATGAAGAACATGAAAAGAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGATGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTACGGGTTATGGGATGTCAAAGNAAATTGCCCTGTAAGGGCATTCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB621404             [                                                                                                                                                                                                                                                                                                                                                                                       AGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATATGAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGGTTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGTTTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGCGTCTGCATCAACTGATAGCACATTAC GGTTATGGGATGTCAAAGAAAATTGCCCTGTAAGGACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCCAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGGAATGAACATCAAATAAGCTTGTTTGGTTGCAAAAAAAAAga     ]
[+] EMBL BI808928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTGTTGGGCTGTCTGTAAATAACGAGTACATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTC AAACCTGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTCTTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAGTCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGATCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCCC AATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGC AAGTTTTGAAGGTAATCAGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGTTTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCAAATAAGCTTGTTTGGTTGCATAAAAAAAAAAAAA ]


>consensus_11495#1 TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGA GCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGT TAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAG CTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTAT AGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAAA GAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGA TGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATAT GAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGG TTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGT TTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGC GTCTGCATCAACTGATAGCACATTACGGTTATGGGATGTCAAAGAAAATTGCCCTGTAAG GACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTA CATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACC TGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTC TTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAG TCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGA TCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCC CAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATC AGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGT TTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCA AATAAGCTTGTTTGGTTGCAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11495#0      TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGA 60
consensus_11495#1      TGGAGATCTGTTTCACTCTGCAAATATCGTATCAAGTATCGAATTTGACCGTGATGATGA 60
                       ************************************************************

consensus_11495#0      GCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGT 120
consensus_11495#1      GCTATTTGCTACTGCTGGAGTCTCAAAGCGCATCAAAGTCTTCGAGTTTTCTACAGTTGT 120
                       ************************************************************

consensus_11495#0      TAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAG 180
consensus_11495#1      TAATGAACCATCAGATGTGCATTGTCCAGTTGTTGAAATGGCTACTAGATCTAAACTCAG 180
                       ************************************************************

consensus_11495#0      CTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTAT 240
consensus_11495#1      CTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTAT 240
                       ************************************************************

consensus_11495#0      AGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAGA 300
consensus_11495#1      AGTAACTGTTTGGGATGTCCAAACCCGCCAGAGTGTGATGGAGTATGAAGAACATGAAAA 300
                       ********************************************************** *

consensus_11495#0      GAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGA 360
consensus_11495#1      GAGAGCATGGAGTGTTGATTTTTCTCGAACAGAACCCTCGATGCTAGTATCTGGGAGTGA 360
                       ************************************************************

consensus_11495#0      TGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATAT 420
consensus_11495#1      TGATTGCAAGGTCAAAGTGTGGTGCACAAAGCAAGAAGCAAGTGCCATCAATATTGATAT 420
                       ************************************************************

consensus_11495#0      GAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGG 480
consensus_11495#1      GAAGGCCAATATTTGCTCTGTCAAATATAATCCTGGGTCGAGCCACTATGTTGCAGTGGG 480
                       ************************************************************

consensus_11495#0      TTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGT 540
consensus_11495#1      TTCTGCTGATCACCATATTCATTATTTTGATTTGCGAAATCCAAGTGCGCCTGTCCATGT 540
                       ************************************************************

consensus_11495#0      TTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGC 600
consensus_11495#1      TTTTGGTGGGCACAAGAAAGCTGTTTCTTATGTGAAGTTCCTGTCCACCAATGAGCTTGC 600
                       ************************************************************

consensus_11495#0      GTCTGCATCAACTGATAGCACATTACGGTTATGGGATGTCAAAGAAAATTGCCCTGTAAG 660
consensus_11495#1      GTCTGCATCAACTGATAGCACATTACGGTTATGGGATGTCAAAGAAAATTGCCCTGTAAG 660
                       ************************************************************

consensus_11495#0      GACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTA 720
consensus_11495#1      GACATTCAGAGGGCACAAGAATGAAAAGAACTTTGTTGGGCTGTCTGTAAATAACGAGTA 720
                       ************************************************************

consensus_11495#0      CATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACC 780
consensus_11495#1      CATTGCCTGCGGGAGTGAAACGAATGAGGTTTTTGTTTACCACAAGGCTATCTCAAAACC 780
                       ************************************************************

consensus_11495#0      TGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTC 840
consensus_11495#1      TGCTGCCAACCACAGATTTGTATCATCTGATCTCGATGATGCAGATGATGATCCTGGCTC 840
                       ************************************************************

consensus_11495#0      TTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAG 900
consensus_11495#1      TTATTTTATTAGCGCAGTCTGCTGGAAGAGCGATAGCCCTACCATGTTAACTGCTAACAG 900
                       ************************************************************

consensus_11495#0      TCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGA 960
consensus_11495#1      TCAGGGCACCATTAAAGTTCTTGTACTTGCTCCTTGATGAAATCAGTGGTTTTCATGAGA 960
                       ************************************************************

consensus_11495#0      TCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCC 1020
consensus_11495#1      TCCCTAGATAGCTTGTATATTTGATGTATACAGTTGTTTCCTTTTCGTGCCATTATACCC 1020
                       ************************************************************

consensus_11495#0      CAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATC 1080
consensus_11495#1      CAAATGGGAGTGGAGGTATTACTGATCTCCAACATAGGGCGCAAAGTTTTGAAGGTAATC 1080
                       ************************************************************

consensus_11495#0      AGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGT 1140
consensus_11495#1      AGCTGACATAGGGTTTCGAGGGCTCGAAATGTGCATAGTCCAGAATTCTCATGTATAGGT 1140
                       ************************************************************

consensus_11495#0      TTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCA 1200
consensus_11495#1      TTAAAGCAGTCAAGTAATTGATTATACATATGTAACGTGAGAATTGAGAAATGAACATCA 1200
                       ************************************************************

consensus_11495#0      AATAAGCTTGTTTGGTTGCATATATTGGATTGGATTTTGGGAACTGGGAAGACAAGCTGT 1260
consensus_11495#1      AATAAGCTTGTTTGGTTGCAAAAAAAAAAAAAAAA------------------------- 1235
                       ******************** * *    *    *                          

consensus_11495#0      ACTGGGCTGATTTCAGCAACACAAGCCAGTTTGTCACACATCTGCTACCTAACAGAAATA 1320
consensus_11495#1      ------------------------------------------------------------
                                                                                   

consensus_11495#0      GTTAAAAA 1328
consensus_11495#1      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)