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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11510#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1931 fasta sequence
[GCGACGATGAGTAATATATCATCAAAGGATATAATGGAGACATTAATTTCCTCGATCAGCTACTGCTGATCCTCCTTCTTCGAGAAATAGCTGGCACAGCCACGCCGAAGCCATGATTCATCGCCATGTTCCTCTTTTAGTGCTTGATCCTGACGCTGCGGCTTCTTAGGTGTAAGAACAGGTTTATTTTTATGTGCTCTGATGTCTTTCTTCACCTGCTTAGGGACATTGTCACAGTCCAGATCAAGCTCCTTCAATTTCTCAACATTGCCAATGCCAGGGAGAGGCTCCAACTCAGCGAAGGACGGCCGTGACCAGATGATCTTCTCAAGGTACGGCGGAATCGGTGGCTCGACGCAAAGCATCTCGCCCCCCCCCCTCCCCCCCACGCATCACCACGATTTCTGCTTCTCCTCCCGGCAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGC-AGAGTTTTCCACTGATACT-GAACAATGGCACTGC-ATAAATTGTTTCTTTA-TGTTATTTCGAAAGTTTGC-AAGTTATTTCCTCGTTAATTTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTCAATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAACAACTGCCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGACAGGGTGCTTGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTGCATTTTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAATGCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTTATTGATTATCAAATGATTATCAAACTGAGAAAAAATAATTCTACCATCAAACTAGACCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTGTTAGTACCTCTTTCCACCTTCCTTCTATTACATCAAACTCACGGTAATCTCCGCATTATTCTGAAATTTCTTCATGCCATATAATCCATGCAGCTTAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGTTATTGTGGCTCACAAACTTTGTATCTTTTGTATTAATGGCATTGTTTTTTTATTGGATTAATGGCAGCAATAGCTATTATATATAGTGTGCAAACAGGAGG]
[+] EMBL AK101779 [GCGACGATGAGTAATATATCATCAAAGGATATAATGGAGACATTAATTTCCTCGATCAGCTACTGCTGATCCTCCTTCTTCGAGAAATAGCTGGCACAGCCACGCCGAAGCCATGATTCATCGCCATGTTCCTCTTTTAGTGCTTGATCCTGACGCTGCGGCTTCTTAGGTGTAAGAACAGGTTTATTTTTATGTGCTCTGATGTCTTTCTTCACCTGCTTAGGGACATTGTCACAGTCCAGATCAAGCTCCTTCAATTTCTCAACATTGCCAATGCCAGGGAGAGGCTCCAACTCAGCGAAGGACGGCCGTGACCAGATGATCTTCTCAAGGTACGGCGGAATCGGTGGCTCGACGCAAAGCATCTCGCCCCCCCCCCTCCCCCCCACGCATCACCACGATTTCTGCTTCTCCTCCCGGCAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGC AGAGTTTTCCACTGATACT GAACAATGGCACTGC ATAAATTGTTTCTTTA TGTTATTTCGAAAGTTTGC AAGTTATTTCCTCGTTAATTTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTCAATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAACAACTGCCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGACAGGGTGCTTGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTGCATTTTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAATGCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTTATTGATTATCAAATGATTATCAAACTGAGAAAAAATAATTCTACCATCAAACTAGACCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTGTTAGTACCTCTTTCCACCTTCCTTCTATTACATCAAACTCACGGTAATCTCCGCATTATTCTGAAATTTCTTCATGCCATATAATCCATGCAGCTTAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGTTATTGTGGCTCACAAACTTTGTATCTTTTGTATTAATGGCATTGTTTTTTTATTGGATTAATGGCAGCAATAGCTATTATATATAGTGTGCAAACAGGAGG]
[+] EMBL CB673640 [ ACGCATCACCTCGATTTCTGCTTCTCCTCCCGGCAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGGTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGC AGAGTTTTCCACTGATACT GAACAATGGCACTGC ATAAATTGTTTCTTTA TGTTATTTCGAAAGTTTGC AAGTTATTTCCTCGTTAATTTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTCAATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAACAACTGCCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGACAGGGTGCTTGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTGCATTTTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAATGCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTT ]
[+] EMBL C71717 [ CTCCCGGCAGGCGGCGGCGCTGCCCCCNACCCCCCGACGCAGGCACCGCATCACCGCATCTTTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCNAGCCCCCGGCGCGGTATTTNTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGCAAGAGTTTTCCACTGATACTGGACCANTNGCACTGCAATAAATNGTTTCTTTANGGTAATTTGGAAGGTTTGCAAAGTTATTTCCNCGgt ]
consensusID : consensus_11510#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1411 fasta sequence
[TCTCAGCTCAGCTCAGGCTCAGCTAGACGCTACTCGCATCGGAGCATCACATTGCCGTGTGCCGTTGCTCGCATTGCAGCTGCAGCTACTACTACCATTCCCACACCTTTTCTAGCTCTCTGTTCCACACCTCTCCCTCTTGCATTGCAGCCAAGACAGCAACCAGCAGCAGCAGCAGCTCAGCTAGCTAGTTTCTGCTTTCTTGATTTGTTCTTGGATTTGGGCGAGCTGTACATCTAGAGAGCGGGTGATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGCCGTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAGGAGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGGCGTGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTG-CTGATGATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCACTCGCAAGGCAAGGCAAACAAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCACCAGCTACAGGGAATAATGCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCTCCTAGTACTCCTGTTGTTGGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACATCCAGCAAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGAGACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGATGTGGCAATATCTGGCTTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGACAAGGTGCTTGTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTGACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGATCTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGGGGTTTTCCTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTGTGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTAAATGCTCTACATTTATGCAGTTTATTCTCTGGCAAAAAAAA]
[+] EMBL AK121870 [TCTCAGCTCAGCTCAGGCTCAGCTAGACGCTACTCGCATCGGAGCATCACATTGCCGTGTGCCGTTGCTCGCATTGCAGCTGCAGCTACTACTACCATTCCCACACCTTTTCTAGCTCTCTGTTCCACACCTCTCCCTCTTGCATTGCAGCCAAGACAGCAACCAGCAGCAGCAGCAGCTCAGCTAGCTAGTTTCTGCTTTCTTGATTTGTTCTTGGATTTGGGCGAGCTGTACATCTAGAGAGCGGGTGATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGCCGTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAGGAGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGGCGTGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTG CTGATGATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCACTCGCAAGGCAAGGCAAACAAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCACCAGCTACAGGGAATAATGCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCTCCTAGTACTCCTGTTGTTGGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACATCCAGCAAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGAGACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGATGTGGCAATATCTGGCTTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGACAAGGTGCTTGTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTGACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGATCTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGGGGTTTTCCTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTGTGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTAAATGCTCTACATTTATGCA ]
[+] EMBL C27285 [ CGGAGAGCATGAAGAAGATCAGCAGAGGCCGTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCAATCACCATCGCCATGGCGATGAACAGGAGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGGCGTGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCT CTGTTTNATGATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTTTCCCACTCGCAAGGCAAGGCAAACAAANAC ]
[+] EMBL AU100805 [ AAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGAGACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGATGTGGCAATATCTGGCTTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGACAAGGTGCTTGTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTGACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGATCTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGGGGTTTTCCTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTGTGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTAAATGCTCTACATTTATGCAGTTTATTCTCTGGCAAAAAAAA]
[+] EMBL OSS13974A [ TGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATNAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGGGA CCCCTCACTGCTGGAGCAAAGNNCTNCCANCAGGAAGATGTGGCAATATCTGGCTTNCTAGATGGACCTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGCCAAGGTGCTTTTTGGAGATGTNCCATGGGGGATGTTTGTTTnt ]
consensusID : consensus_11510#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence
[CCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTCTTATAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGGTCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCTCCAGTAGCATGTTTTGGTTCTTGAAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTAGGGTTACTTACCANAAGTGATAC]
[-] EMBL CB673641 [CCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTCTTATAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGGTCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCTCCAGTAGCATGTTTTGGTTCTTGAAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTAGGGTTACTTACCANAAGTGATAC]
consensusID : consensus_11510#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 666 fasta sequence
[GATGTCCCCTTGGGGGATGGTTNGTTTCCTCCAGTTAAGAGACTGAGAGTACTGAAGACATCTGCCCTATCTTCCTCTCTTATAACTTCTGGACGGAAAAGACCAGCAGCTGAGTGTTGACCCTCTTTTTTCGATCTGCTTTAACCTTTCCANTGNCCTGCTGTTCAGAAGATATGACCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCATGTCTTGCTGTGCTGAGCTTGTAACCAGCCTTAGAGAAGACAGTCCGAGATTAGGGCAAAGGATAGCTCCATCCAAGAGACGAAGGCCTTCCAGTGAGACATTGCACACAATAACCATAAGGGTCCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCCCCAGTAGCATGTTTTGGTTCTTGAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTATAGTTACTTACCAAAGTGATACATGTTTGAGAGATTCTTTCCATATGTTGGGTTCAAGATATAGAAAAATATTGTTCTTATGTGGCTTAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C98414 [GATGTCCCCTTGGGGGATGGTTNGTTTCCTCCAGTTAAGAGACTGAGAGTACTGAAGACATCTGCCCTATCTTCCTCTCTTATAACTTCTGGACGGAAAAGACCAGCAGCTGAGTGTTGACCCTCTTTTTTCGATCTGCTTTAACCTTTCCANTGNCCTGCTGTTCAGAAGATATGACCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCATGTCTTGCTGTGCTGAGCTTGTAACCAGCCTTAGAGAAGACAGTCCGAGATTAGGGCAAAGGATAGCTCCATCCAAGAGACGAAGGCCTTCCAGTGAGACATTGCACACAATAACCATAAGGGTCCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCCCCAGTAGCATGTTTTGGTTCTTGAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTATAGTTACTTACCAAAGTGATACATGTTTGAGAGATTCTTTCCATATGTTGGGTTCAAGATATAGAAAAATATTGTTCTTATGTGGCTTAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11510#0 GCGACGATGAGTAATATATCATCAAAGGATATAATGGAGACATTAATTTCCTCGATCAGC 60
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 TACTGCTGATCCTCCTTCTTCGAGAAATAGCTGGCACAGCCACGCCGAAGCCATGATTCA 120
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 TCGCCATGTTCCTCTTTTAGTGCTTGATCCTGACGCTGCGGCTTCTTAGGTGTAAGAACA 180
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 GGTTTATTTTTATGTGCTCTGATGTCTTTCTTCACCTGCTTAGGGACATTGTCACAGTCC 240
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 AGATCAAGCTCCTTCAATTTCTCAACATTGCCAATGCCAGGGAGAGGCTCCAACTCAGCG 300
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 AAGGACGGCCGTGACCAGATGATCTTCTCAAGGTACGGCGGAATCGGTGGCTCGACGCAA 360
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 AGCATCTCGCCCCCCCCCCTCCCCCCCACGCATCACCACGATTTCTGCTTCTCCTCCCGG 420
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ---TCTCAGCTCAGCTCAGGCTCAGCTAGACGCTACTCGCATCGGAGCATCACATTGCCG 57
consensus_11510#0 CAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCG 480
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 TGTGCCGTTGC-TCGCATTGCAGCTGCAGCTACTACTACC--ATTCCCACACCTTTTCTA 114
consensus_11510#0 AGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGC 540
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 GCTCTCTGTTCCACACCTCTCCCTCTTGCATTGCAGCCAAGACAGCAACCAG-CAGCAGC 173
consensus_11510#0 GCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTA 600
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 AGCAGCTCAGCTAGCTAGTTTCTGCTTTCTTGATTTGTTCTTGGATTTGGGCGAGCTGTA 233
consensus_11510#0 ATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCC 660
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 CATCTAGAGAGCGGGTGATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGCC 293
consensus_11510#0 TTCTTGCAGGTATATGAACCTCA-ACTCTATTGTTTTGTAACAAAAACAAATCATTCAAT 719
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 GTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAGG 353
consensus_11510#0 TGCGACTGTAGTTTATGATAGAGT--ATCTGCAGAGTTTTCCACTGATACTGAACAATGG 777
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 AGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGG 413
consensus_11510#0 CACTGCATAAATTGTTTCTTTATGTTATTTCGAAAGTTTGCAAGTTATTTCCTCGTTAAT 837
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 CG-TGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTGCTGAT 472
consensus_11510#0 TTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTC 897
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 GATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCAC 532
consensus_11510#0 AATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAA-CAACTG 956
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 TCGCAAGGCAAGGCAAACAAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCA 592
consensus_11510#0 CCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGA 1016
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 CCAGCTACAGGGAATAATGCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCT 652
consensus_11510#0 CAGGGTGCT--TGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTG--CATT 1072
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 CCTAGTACTCCTGTTGTTGGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACA 712
consensus_11510#0 TTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAAT 1132
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 TCCAGCAAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATC 772
consensus_11510#0 GCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTTATTGATTATCAA 1192
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 AAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGAT 832
consensus_11510#0 ATGATTATCAAACTGAGAAAAAATAATTCTACCATCAAACTAGACCATGCCTCCTATTTG 1252
consensus_11510#2 --------------------------------------------CCATGCCTCCTATTTG 16
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 CTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGC 892
consensus_11510#0 ATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAA 1312
consensus_11510#2 ATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAA 76
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 CTTCTTGCAGCCCAAAGAGACCCCCTCAC-TGCTGGAGCAAAGGACTGCCAGCAG-GAAG 950
consensus_11510#0 ATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGAT 1372
consensus_11510#2 ATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGAT 136
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ATGTGGCAATATCTGGC-TTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGAT 1009
consensus_11510#0 TGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTG--TTTCTT 1430
consensus_11510#2 TGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTG--TTTCTT 194
consensus_11510#3 -------------------------GATGTCCC----CTTGGGGGATGGTTNGTTTCCTC 31
consensus_11510#1 TATGAAGGCGACAAGGTGCTTGTTGGAGATGTG---CCATGGGGGATGTTTG--TTTCTT 1064
** * ** ***** ** ** **
consensus_11510#0 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTGTTAGTACCTCTT 1490
consensus_11510#2 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTCTTA--------- 245
consensus_11510#3 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGCCCTATCTTCCTCTCTTA--------- 82
consensus_11510#1 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAA--------- 1115
********************************* *** ***** *** * *
consensus_11510#0 TCCACCTTCCTTCTATTACATCAAACTCACGGTAATCTCCGCATTATTCTGAAATTTCTT 1550
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 ------------------------------------------------------------
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 CATGCCATATAATCCATGCAGCTTAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTG 1610
consensus_11510#2 -----------------------TAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTG 282
consensus_11510#3 -----------------------TAACTTCTGGACGGAAAAGACCAGCAGCTGAGTGTTG 119
consensus_11510#1 -----------------------TAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTG 1152
**** *************** **** ***********
consensus_11510#0 ACCTTCTTTTTTCGATCTGCTT-AACACTTTCAGTGACCTGCTGTTCAGAAGAATATGAT 1669
consensus_11510#2 ACCTTCTTTTTTCGATCTGCTTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGAT 342
consensus_11510#3 ACCCTCTTTTTTCGATCTGCTTTAACCTTTCCANTGNCCTGCTGTTCAGAAGA-TATGAC 178
consensus_11510#1 ACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGAT 1212
*** ******** ** ****** ** * ** ** ******** ****** *****
consensus_11510#0 CCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACC 1729
consensus_11510#2 CCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACC 402
consensus_11510#3 CCTCTGAGCTTGTATCATCGTCTCTTTCTCTCA-TGTCTTGCTGTGCTGAGCTTGTAACC 237
consensus_11510#1 CTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGG-- 1270
* ******************************* **************** *** *
consensus_11510#0 AGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGAC--- 1786
consensus_11510#2 AGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGAC--- 459
consensus_11510#3 AGCC-TTAGAGAAGACAGTCCGAGATTAGGGCAAA-GGATAGCTCCATCCAAGAGAC--- 292
consensus_11510#1 GGTTTTC--------CTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTG 1322
* * * ** * *** * * * ** * **** **
consensus_11510#0 ---GAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGTT------------ 1831
consensus_11510#2 ---GAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGGTCAGGTTCTTAGT 516
consensus_11510#3 ---GAAGGCCTTCCAGTGAGACATTGCACACAA-TAACCATAAGGGTCCAGGTTCTTAGT 348
consensus_11510#1 TGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTA------------ 1370
**** * ** * ***** * ** *** *
consensus_11510#0 -----ATTGTGGCTCACAAA----CTTT----GTATCTTTTG-TATTAATGGCATTGTT- 1876
consensus_11510#2 GAGAGATGGTGAAACAGAAGGGAGCTCCAGTAGCATGTTTTGGTTCTTGAAGCCTTGCAC 576
consensus_11510#3 GAGAGATGGTGAAACAGAAGGGAGCCCCAGTAGCATGTTTTGGTTCTTG-AGCCTTGCAC 407
consensus_11510#1 -----AATGCTCTACATTTATGCAGTTT------ATTCTCTGGCAAAAAAAA-------- 1411
* * ** ** * **
consensus_11510#0 -TTTTTATTGGATTAATGGCAG------CAATAGCTATTA-----TATATAGTGTGCAAA 1924
consensus_11510#2 ATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGT 636
consensus_11510#3 ATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGT 467
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 CAGGAGG----------------------------------------------------- 1931
consensus_11510#2 CAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTT 696
consensus_11510#3 CAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTT 527
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 ------------------------------------------------------------
consensus_11510#2 TTGTCAGGAAATAAACAGCAAGCAATGTAGGGTTACTTACCANAAGTGATAC-------- 748
consensus_11510#3 TTGTCAGGAAATAAACAGCAAGCAATGTATAGTTACTTACCAAAGTGATACATGTTTGAG 587
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 ------------------------------------------------------------
consensus_11510#2 ------------------------------------------------------------
consensus_11510#3 AGATTCTTTCCATATGTTGGGTTCAAGATATAGAAAAATATTGTTCTTATGTGGCTTAAA 647
consensus_11510#1 ------------------------------------------------------------
consensus_11510#0 -------------------
consensus_11510#2 -------------------
consensus_11510#3 AAAAAAAAAAAAAAAAAAA 666
consensus_11510#1 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||