cluster # 11514

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Oryza sativa
cluster # 11514 cluster # 11514 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11514#0 length = 952 sequences # 9
consensusID : consensus_11514#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 952
fasta sequence
                              [GATCAAGAGCTGGTAGTAGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTGCCGGTGGACGGCGAGCGGTGGCAGGTGGCGGAGAACAAAGATGAAGTGAGCCTGTGGTTCGACGTGCCGGGGC-TTTCTCCGGCAGATCTGAT-CGTCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG-CCATTGCAGATCATCAGGAGGCCACCG-CCGACGAGTTCAGCGGCGGCGGGATCTACGCGCGGCTGCTCCTCCCGG-CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA-AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA-AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC--ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT-CCAAATAAATAAAATGATCATCTTTGTTGTGCTTTCAAAAAAAAAAAAAAA]

[+] EMBL CF333533             [GATCAAGAGCTGGTAGTAGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTGCCGGTGGACGGCGAGCGGTGGCAGGTGGCGGAGAACAAAGATGAAGTGAGCCTGTGGTTCGACGTGCCGGGGC TTTCTCCGGCAGATCTGAT CGTCGAGATCGACGAAGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK107162             [  TCAAGAGCTGGTAGTAGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTGCCGGTGGACGGCGAGCGGTGGCAGGTGGCGGAGAACAAAGATGAAGTGAGCCTGTGGTTCGACGTGCCGGGGC TTTCTCCGGCAGATCTGAT CGTCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGGAGGCCACCG CCGACGAGTTCAGCGGCGGCGGGATCTACGCGCGGCTGCTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC  ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCAAATAAATAAAATGATCATCTTT                          ]
[+] EMBL AU065634             [                 AGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTNAACCGGTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU065726             [                  GTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCNCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTG CGGTGGACGGCGA CGGTGG AAGTGGCGGAGA  NAAGATGAAGT AGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU030171             [                                                                                                                                                                                                                                                                                                                                                                   AACAAAGATGAAGTGACCCTGTGGTTCGACGTGCCGGGGC TTTCTCCGGCAGATCTGAT CGTCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGGAGGCCACCN CCGACGANTTCAGCGGCGGCGGGATCTACGCGCGGCTGNTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC  ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCTAATAAATAAAATGATCATCTTTGTTGTGNTTTCAAAAAAAAAAAA   ]
[+] EMBL AU030507             [                                                                                                                                                                                                                                                                                                                                                                                               ACTTCCCGGGGC TTTCTCCGGCAGATCTGATCCGNCGAGATCGACGAGGACGTGCTCGTCATCAAGANGAAGAAGAAGNCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGGAGGCCACCG CCGACGNGTTCAGCGGCGGCGGGATCTACGCGCGGCTGCTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC  ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCTAATAAATAAAATGATCATCTTTGTTGTGCTTTCAAAAAAAAAAAA   ]
[+] EMBL BI804873             [                                                                                                                                                                                                                                                                                                                                                                                                   cCCGGGGCTTTTCTCC GCAAATCTGAT C TCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAATAAGAA GCGAGCCCAAAGAGCAACT CCATACTCCTACTTCCGGTGCCCATTGCAGATCATCAGGAGCCCCCCG CCGACGAGTTCAGC GC GCGGGATCTACGCGCGGCTGCTCCTCCCGGCCGGGGTACCGTAGAGAGGGTGTCCA GC AAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCACAGGTCAAGGAGAGTGTCCGCCAGCAGATCAAGGTCGATATCTCTGACACAGTAGAATTCAGTGAGCTTCCCTGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCCAGTTATATCTTGCCTAAGATTCTAGCTCATATATATATCCATAACTGGTCCCTGATCTGA  TCTCTCTCTCTATATATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCCAGCTTTATTCCGGCTGCATCCCAAATAAATAAAATGATCATCTTTGTTGTGCT   AAAAAAAAAA     ]
[-] EMBL CF333534             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     G CCATTGCAGATCATCAGGAGGCCACCGCCCGACGAGTTCAGCGGCGGCGGGATTTACGCGCGGCCGCTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC  ACATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCAAATAAATAAAATGATCATCTTTGTTGTGCTTTCAAAAAAAAAAAAAAA]
[+] EMBL CA764491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACAGTGCAAGT  TATCTTGCCTAAGATTCTAGCTC  ATACATATCAATAACTGGTCCATGATCTG   T TCTCTATATATATACACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCTGGCTGCAT CCAAATAAATAAAATGATCATCTTTGTT                       ]




>consensus_11514#0
GATCAAGAGCTGGTAGTAGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACA
ATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTG
CACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACC
GGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGC
AATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACC
CGTTGTTCTGGTGAACCCGGTGCCGGTGGACGGCGAGCGGTGGCAGGTGGCGGAGAACAA
AGATGAAGTGAGCCTGTGGTTCGACGTGCCGGGGCTTTCTCCGGCAGATCTGATCGTCGA
GATCGACGAGGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTA
CAATACTCCTACTTCCGGTGCCATTGCAGATCATCAGGAGGCCACCGCCGACGAGTTCAG
CGGCGGCGGGATCTACGCGCGGCTGCTCCTCCCGGCGGGGTACAGTAGAGAGGGTGTCCA
GGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCAAGGTCAAGGAGAGTGTCCG
CAGGAAGATCAATGTCGATATCTCTGTCAAGTAGAATTCAGTGAGCTTCCATGGAATTCA
TATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGAT
TCTAGCTCATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACA
TCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCA
TCCAAATAAATAAAATGATCATCTTTGTTGTGCTTTCAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case