Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11528 cluster # 11528       Sequences # 9       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11528#0 length = 3001 sequences # 4  
consensus_11528#1 length = 1349 sequences # 3  
 consensus_11528#2 length = 827 sequences # 1  
consensus_11528#3 length = 208 sequences # 1  
consensusID : consensus_11528#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3001
fasta sequence 
                              [GAACTAGCGCCGCTTCGTCGTCCTGCCGCTGCGGCTTGCAGGGAGAGACAGCGAGAGCTGTGCTGATGAAGTGATGAAACTTGTGGGCTTGCGGCTTCCAGGACCAAACTGCAGGGAGATGGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGATGGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTGTAAGTTGTGCTCTAAATTGGTAGGGAATATCTGAAAATGGAGATAGGGAGGTCCTGATTTTGTGTTATATTCATAGAAGTTATTGTTAGGATGTAGCTTTTAGTTATTTTCATTTGACATTGTGTTTTGATTTTGAAATAAAATATATTACCCATTACTTCGTCTTTCAAAGTATATTATGGTGTCCTTTGTGGATAAATGATGTTAGGTTTCAGCCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAATGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGTTCTGGTTTGCTACCTTTATATCTTTCTTTTGGCAATCGCATATTTCAATGAGAAGTTCCTTTAGGGATATTTATCTGGAATGCAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGGTTTGAAAGATCGTAACAAATTTTATGCATTTTGATATCTACGTCTGACACATTGATTCACCAACTAGTCATATTTTCAGACATTGTCTTCATGGTCATCTTGTAGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAGCACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATGGCGGCCGCCAGCTAGACTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATATGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCAGCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGACTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATCGACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAATACAAGTAAGAGTAGATTTATCTCTAGGATTCTATCTTTAGGACTCTATCTTATCTCTAGGAGTCAATCTCTAGGATATATCTTATCTCTAT-ATTTGTATTTGACTCTTATCTCTAACTAACACATTATATTTCTAACAAAAACCCTCAGTCGTAACGGGAGCGAAGCGAACGATTGCGACTGGATTTGAAATCTTCTATTTCTTCATCTTTCTTTGACTCACCATCATCGACTGCATCTCTGATGGACGGTCCTCCACCTGGTGCCTGCGTCCCCTTCTGTGTCGTCCCTTGACTCTCCTCTATTCCCTCCCGCAGTCATAGCGGGAGTGTCATGGACGATAGCGATGACACGGACGCTTGGACTGGAGTTTTCGTCAATGATTTTTGTTGTAGACGTTCGTCAATGTAGCCGATCATGAAGTAACTGTGGTTGTCGGTGTAGCCGCATATAGCCAAAGGCGAAAAAAAAAAAAATTTACGCCATGGTGTGAAGACAAAAACTGTAATTGTTAGCATCTTGCACCTTGTAGATGTCAGAGGATGCCATTAGGGACCTCTTGCATATGTCAGAGGACGTCGTTGGCAATGAGGCCACCACTTTGGTTGGTCCTTCTGCGCCGTATAGCGGTCACCACAATAGTGATGCCGGGTTGATGCAGTCGTTGTAGTCGTACATGACGTGATCGATGCCGTTGTCGGTGACGCGGTCGTTGCCGTCGTAGAGGACACGGTCGATGTCGTCGATGAAGCGTCTTGCAGATTAATCTGTCAGAGGACGCGAGGTGTCCATCTATGTAGACGAGTCGGCAGCGGCGATGCAGATCGATCCATGGATGAGGCCGGATGGTATGATGCTTGTTGACGTTGTCTGCTCCTGTAACACCTGCCGCATTGCTCCTGACGATCATATGGTTTTCTGTGGCTAGCTAATAGATCTAAAACTAATTATTAGAAAACGCATCTAATGATATGCGGTAAACTAATCTGTAAATGATTGGAGAGGCTAGCTAGCTAATGCGGTGCGGTGCCCCAGGGAGAAATTGATCTCATCTCCCTGGGGCAGCGCGGATGGAACCTAGCTGGAACCGAGGATCGATCGACGTTTGTCTACGGCTCTGATACCATGTAGAAAATCTAATACGCTGTATTTTGGTATT]

[+] EMBL AK068129             [GAACTAGCGCCGCTTCGTCGTCCTGCCGCTGCGGCTTGCAGGGAGAGACAGCGAGAGCTGTGCTGATGAAGTGATGAAACTTGTGGGCTTGCGGCTTCCAGGACCAAACTGCAGGGAGATGGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGATGGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTGTAAGTTGTGCTCTAAATTGGTAGGGAATATCTGAAAATGGAGATAGGGAGGTCCTGATTTTGTGTTATATTCATAGAAGTTATTGTTAGGATGTAGCTTTTAGTTATTTTCATTTGACATTGTGTTTTGATTTTGAAATAAAATATATTACCCATTACTTCGTCTTTCAAAGTATATTATGGTGTCCTTTGTGGATAAATGATGTTAGGTTTCAGCCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAATGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGTTCTGGTTTGCTACCTTTATATCTTTCTTTTGGCAATCGCATATTTCAATGAGAAGTTCCTTTAGGGATATTTATCTGGAATGCAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGGTTTGAAAGATCGTAACAAATTTTATGCATTTTGATATCTACGTCTGACACATTGATTCACCAACTAGTCATATTTTCAGACATTGTCTTCATGGTCATCTTGTAGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAGCACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATGGCGGCCGCCAGCTAGACTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATATGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCAGCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGACTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATCGACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAATACAAGTAAGAGTAGATTTATCTCTAGGATTCTATCTTTAGGACTCTATCTTATCTCTAGGAGTCAATCTCTAGGATATATCTTATCTCTAT ATTTGTATTTGACTCTTATCTCTAACTAACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB655800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAGCACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATGGCGGCCGCCAGCTAGACTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATATGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCAGCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGACTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTcaaaaagga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF312313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCAGCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTNTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCCCCGAGA CGACAGGATCCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGACTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATCGACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAATACAAGTAAGAGTAGATTTATCTCTAGGATTCTATCTTTAGGACTCTATCTTATCTCTAGGAGTCAATCTCTAGGATATATCTTATCTCTAT ATTTGTATTTGACTCTTATCTCTAACTAACACATTATATTTCTAACAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AK110679             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aTTTTCTGATATATTGGATCGACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTACAATACAAATAAGAGTAGATTTATCTTTAGGATTCTATCTCTAGGACTCTATCTTATCTCTAGGATTCTATCTCTAGGATATATCTTATCTCTATAATTTGTATTTGACTCTTATCTCTAACTACCATATTATACTTCTAACATTCCCCCTCAGTCGTAACGGGAGCGAAGCGAACGATTGCGACTGGATTTGAAATCTTCTATTTCTTCATCTTTCTTTGACTCACCATCATCGACTGCATCTCTGATGGACGGTCCTCCACCTGGTGCCTGCGTCCCCTTCTGTGTCGTCCCTTGACTCTCCTCTATTCCCTCCCGCAGTCATAGCGGGAGTGTCATGGACGATAGCGATGACACGGACGCTTGGACTGGAGTTTTCGTCAATGATTTTTGTTGTAGACGTTCGTCAATGTAGCCGATCATGAAGTAACTGTGGTTGTCGGTGTAGCCGCATATAGCCAAAGGCGAAAAAAAAAAAAATTTACGCCATGGTGTGAAGACAAAAACTGTAATTGTTAGCATCTTGCACCTTGTAGATGTCAGAGGATGCCATTAGGGACCTCTTGCATATGTCAGAGGACGTCGTTGGCAATGAGGCCACCACTTTGGTTGGTCCTTCTGCGCCGTATAGCGGTCACCACAATAGTGATGCCGGGTTGATGCAGTCGTTGTAGTCGTACATGACGTGATCGATGCCGTTGTCGGTGACGCGGTCGTTGCCGTCGTAGAGGACACGGTCGATGTCGTCGATGAAGCGTCTTGCAGATTAATCTGTCAGAGGACGCGAGGTGTCCATCTATGTAGACGAGTCGGCAGCGGCGATGCAGATCGATCCATGGATGAGGCCGGATGGTATGATGCTTGTTGACGTTGTCTGCTCCTGTAACACCTGCCGCATTGCTCCTGACGATCATATGGTTTTCTGTGGCTAGCTAATAGATCTAAAACTAATTATTAGAAAACGCATCTAATGATATGCGGTAAACTAATCTGTAAATGATTGGAGAGGCTAGCTAGCTAATGCGGTGCGGTGCCCCAGGGAGAAATTGATCTCATCTCCCTGGGGCAGCGCGGATGGAACCTAGCTGGAACCGAGGATCGATCGACGTTTGTCTACGGCTCTGATACCATGTAGAAAATCTAATACGCTGTATTTTGGTATT]




>consensus_11528#0
GAACTAGCGCCGCTTCGTCGTCCTGCCGCTGCGGCTTGCAGGGAGAGACAGCGAGAGCTG
TGCTGATGAAGTGATGAAACTTGTGGGCTTGCGGCTTCCAGGACCAAACTGCAGGGAGAT
GGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGAT
GGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGA
GGCATTCTCCAGAATTTTGTAAGTTGTGCTCTAAATTGGTAGGGAATATCTGAAAATGGA
GATAGGGAGGTCCTGATTTTGTGTTATATTCATAGAAGTTATTGTTAGGATGTAGCTTTT
AGTTATTTTCATTTGACATTGTGTTTTGATTTTGAAATAAAATATATTACCCATTACTTC
GTCTTTCAAAGTATATTATGGTGTCCTTTGTGGATAAATGATGTTAGGTTTCAGCCGGTT
GTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAATGTCTTAGGCTACAATATTTCC
ATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGTTCTGGT
TTGCTACCTTTATATCTTTCTTTTGGCAATCGCATATTTCAATGAGAAGTTCCTTTAGGG
ATATTTATCTGGAATGCAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACT
ATAATGGTTTGAAAGATCGTAACAAATTTTATGCATTTTGATATCTACGTCTGACACATT
GATTCACCAACTAGTCATATTTTCAGACATTGTCTTCATGGTCATCTTGTAGTATTGAAG
AGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGA
ACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGA
CTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGC
CTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGA
ATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGG
ATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAG
CACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATG
GCGGCCGCCAGCTAGACTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATA
TGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCA
GCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCG
GTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTA
TTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGC
TGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGA
AGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGC
TGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGACTGTGG
AAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATCGACCCTCTCATGGG
GTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAATACAAGTAAGAGTAGATT
TATCTCTAGGATTCTATCTTTAGGACTCTATCTTATCTCTAGGAGTCAATCTCTAGGATA
TATCTTATCTCTATATTTGTATTTGACTCTTATCTCTAACTAACACATTATATTTCTAAC
AAAAACCCTCAGTCGTAACGGGAGCGAAGCGAACGATTGCGACTGGATTTGAAATCTTCT
ATTTCTTCATCTTTCTTTGACTCACCATCATCGACTGCATCTCTGATGGACGGTCCTCCA
CCTGGTGCCTGCGTCCCCTTCTGTGTCGTCCCTTGACTCTCCTCTATTCCCTCCCGCAGT
CATAGCGGGAGTGTCATGGACGATAGCGATGACACGGACGCTTGGACTGGAGTTTTCGTC
AATGATTTTTGTTGTAGACGTTCGTCAATGTAGCCGATCATGAAGTAACTGTGGTTGTCG
GTGTAGCCGCATATAGCCAAAGGCGAAAAAAAAAAAAATTTACGCCATGGTGTGAAGACA
AAAACTGTAATTGTTAGCATCTTGCACCTTGTAGATGTCAGAGGATGCCATTAGGGACCT
CTTGCATATGTCAGAGGACGTCGTTGGCAATGAGGCCACCACTTTGGTTGGTCCTTCTGC
GCCGTATAGCGGTCACCACAATAGTGATGCCGGGTTGATGCAGTCGTTGTAGTCGTACAT
GACGTGATCGATGCCGTTGTCGGTGACGCGGTCGTTGCCGTCGTAGAGGACACGGTCGAT
GTCGTCGATGAAGCGTCTTGCAGATTAATCTGTCAGAGGACGCGAGGTGTCCATCTATGT
AGACGAGTCGGCAGCGGCGATGCAGATCGATCCATGGATGAGGCCGGATGGTATGATGCT
TGTTGACGTTGTCTGCTCCTGTAACACCTGCCGCATTGCTCCTGACGATCATATGGTTTT
CTGTGGCTAGCTAATAGATCTAAAACTAATTATTAGAAAACGCATCTAATGATATGCGGT
AAACTAATCTGTAAATGATTGGAGAGGCTAGCTAGCTAATGCGGTGCGGTGCCCCAGGGA
GAAATTGATCTCATCTCCCTGGGGCAGCGCGGATGGAACCTAGCTGGAACCGAGGATCGA
TCGACGTTTGTCTACGGCTCTGATACCATGTAGAAAATCTAATACGCTGTATTTTGGTAT
T

consensusID : consensus_11528#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1349
fasta sequence 
                              [AGCCAACTGCCCAAAGATGGTTTATGATTTCTATGCCTGTTTGACGCCAGAAGACCCATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTTGTTTTCACCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGACATTGTCTTCATGGTCATCTTGTAGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCC-AAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAGCACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATGGCGGCCGCCAGCTAGATTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATATGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCAGCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGCCTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATCGACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAAGGCAAGTAAGAGTAGATTTATCTCTAAAAAAACCCTAAAAGG]

[-] EMBL BU667107             [AGCCAACTGCCCAAAGATGGTTTATGATTTCTATGCCTGTTTGACGCCAGAAGACCCATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTTGTTTTCACCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGACATTGTCTTCATGGTCATCTTGTAGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCC AAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAGCACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF312312             [                                                                                                                                                                                                                                     GCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGACATTGTCTTTATGGTCATCTTGTAGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGCACTGACTGTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB653656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACAGCCCAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATGGCGGCCGCCAGCTAGATTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATATGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCAGCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTCGGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGCCTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATCGACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAAGGCAAGTAAGAGTAGATTTATCTCTAAAAAAACCCTAAAAGG]




>consensus_11528#1
AGCCAACTGCCCAAAGATGGTTTATGATTTCTATGCCTGTTTGACGCCAGAAGACCCATG
GACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTTGTTTTCACCGGTTGTATTGG
TTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCA
TTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTG
CCAGAGCTGCAGCTGCTGCAGAAACTATAATGACATTGTCTTCATGGTCATCTTGTAGTA
TTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGG
ACAGGAACTTAGTGCAACAGCTTATCCAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGT
ACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCAC
CTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGA
GACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTG
GAAGGATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTAT
AACAGCACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAA
CCATGGCGGCCGCCAGCTAGATTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATG
CCATATGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGC
AATCAGCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGA
CAGCGGTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGT
ATTTATTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAA
CGCGCTGCGGATGCTGAGAGACGAGCTGGAGATCACCATGGCGCTCAGCGGCTGCACGTC
GGTGAAGGAGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCCGTTGTTC
TCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGCC
TGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATCGACCCTCTC
ATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAAGGCAAGTAAGAGT
AGATTTATCTCTAAAAAAACCCTAAAAGG

consensusID : consensus_11528#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 827
fasta sequence 
                              [ATCATCCCAATCGTCCGCTACAGCCTACAAATCGCGGTGATGGTCGCGTCAGCGTCGCAAGCTACCGAACTAGCGCCGCTTCGTCGTCCTGCCGCTGCGGCTTGCAGGGAGAGACAGCGAGAGCTGTGCTGATGAAGTGATGAAACTTGTGGGCTTGCGGCTTCCAGGACCAAACTGCAGGGAGATGGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGATGGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTGTTTCAGCCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATNCAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTT]

[+] EMBL CB655799             [ATCATCCCAATCGTCCGCTACAGCCTACAAATCGCGGTGATGGTCGCGTCAGCGTCGCAAGCTACCGAACTAGCGCCGCTTCGTCGTCCTGCCGCTGCGGCTTGCAGGGAGAGACAGCGAGAGCTGTGCTGATGAAGTGATGAAACTTGTGGGCTTGCGGCTTCCAGGACCAAACTGCAGGGAGATGGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGATGGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTGTTTCAGCCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATNCAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTT]




>consensus_11528#2
ATCATCCCAATCGTCCGCTACAGCCTACAAATCGCGGTGATGGTCGCGTCAGCGTCGCAA
GCTACCGAACTAGCGCCGCTTCGTCGTCCTGCCGCTGCGGCTTGCAGGGAGAGACAGCGA
GAGCTGTGCTGATGAAGTGATGAAACTTGTGGGCTTGCGGCTTCCAGGACCAAACTGCAG
GGAGATGGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCC
AAAGATGGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAA
CAGTGAGGCATTCTCCAGAATTTTGTTTCAGCCGGTTGTATTGGTTGATGTGTCCTGTAT
CGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGATTGCTCCTAC
GGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGC
TGCAGAAACTATAATGTATTGAAGAGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCC
AACTTTCAATATACAAGGACAGGAACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGG
CTGGCTATAAGGCAATTGTACTGACTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTG
ATGTCAAGAACAGGTTCACCTTGCCTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGG
ATNCAGGGAAGATAGATGAGACGAATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGA
TTGACCGCTCTTTTTCTTGGAAGGATATCAAGTGGTTACAGACAGTT

consensusID : consensus_11528#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 208
fasta sequence 
                              [GAAGCGTGCGGAATGGCTGAGAGACGAGCTGGAGATTCACCCATTGGGCTCCAGCCGGCCTGGCANCGTCGGTGAAGGAGGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGACTGTGNNAAANTCTAATTT]

[-] EMBL D42469               [GAAGCGTGCGGAATGGCTGAGAGACGAGCTGGAGATTCACCCATTGGGCTCCAGCCGGCCTGGCANCGTCGGTGAAGGAGGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCGCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTTTTGGCTGACTGTGNNAAANTCTAATTT]




>consensus_11528#3
GAAGCGTGCGGAATGGCTGAGAGACGAGCTGGAGATTCACCCATTGGGCTCCAGCCGGCC
TGGCANCGTCGGTGAAGGAGGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATC
GCCGTTGTTCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGT
TTTGGCTGACTGTGNNAAANTCTAATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GAACTAGCGCCGCTTCGTCGTCCTGCCGCTGCGGCTTGCAGGGAGAGACAGCGAGAGCTG 60
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      TGCTGATGAAGTGATGAAACTTGTGGGCTTGCGGCTTCCAGGACCAAACTGCAGGGAGAT 120
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GGCTCTGGTCACAAATGTGTGCGAATATGAAGAACTTGCAAAGCACAAACTGCCAAAGAT 180
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GGTTTATGATTTCTATGCTGTTGACGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGA 240
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GGCATTCTCCAGAATTTTGTAAGTTGTGCTCTAAATTGGTAGGGAATATCTGAAAATGGA 300
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GATAGGGAGGTCCTGATTTTGTGTTATATTCATAGAAGTTATTGTTAGGATGTAGCTTTT 360
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      AGTTATTTTCATTTGACATTGTGTTTTGATTTTGAAATAAAATATATTACCCATTACTTC 420
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GTCTTTCAAAGTATATTATGGTGTCCTTTGTGGATAAATGATGTTAGGTTTCAGCCGGTT 480
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------AGCCAA 6
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAATGTCTTAGGCTACAATATTTCC 540
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      CTGCCCAAAGATGGTTTATGATTTCTATGCCTGTTTGACGCCAGAAGACCCATGGACTCT 66
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGTTCTGGT 600
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      CAGGGAGAACAGTGAGGCATTCTCCAGAATTTTTGTTTTCACCGGTTGTATTGGTTGATG 126
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      TTGCTACCTTTATATCTTTCTTTTGGCAATCGCATATTTCAATGAGAAGTTCCTTTAGGG 660
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      TGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAATATTTCCATGCCCATTATGA 186
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATATTTATCTGGAATGCAGGAGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACT 720
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      TTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGGAGAGCTTGCTACTGCCAGAG 246
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATAATGGTTTGAAAGATCGTAACAAATTTTATGCATTTTGATATCTACGTCTGACACATT 780
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      CTGCAGCTGCTGCAGAAACTATAATGACATTGTCTTCATGGTCATCTTGTAGTATTGAAG 306
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GATTCACCAACTAGTCATATTTTCAGACATTGTCTTCATGGTCATCTTGTAGTATTGAAG 840
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      AGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGA 366
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      AGGTTAATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGA 900
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ACTTAGTGCAACAGCTTATCCAA-GGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGA 425
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ACTTAGTGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGA 960
consensus_11528#2      ------------------------------ATCATCCCAATCGTCCGCTACAGCCTACAA 30
                                                                                   

consensus_11528#1      CTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGC 485
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      CTGTTGATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTCACCTTGC 1020
consensus_11528#2      ATCGCGGTGATGGTCGCGTCAGCGTCGCAAGCTACCGAACTAGCGCCGCTTCGTCGTCCT 90
                                                                                   

consensus_11528#1      CTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGA 545
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      CTCAAAATGTCATGTTGAAGATCTTTGAGGGGCTGGATCAAGGGAAGATAGATGAGACGA 1080
consensus_11528#2      GCCGCTGCGGCTTGCAGGGAGAGACAGCGAGAGCTGTGCTGATGAAGTGATGAAACTTGT 150
                                                                                   

consensus_11528#1      ATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGG 605
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATGGTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGG 1140
consensus_11528#2      GGGCTTGCGGCTTCCAGGACCAAACTGCAGGGAGATGGCTCTGGTCACAAATGTGTGCGA 210
                                                                                   

consensus_11528#1      ATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAG 665
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATATCAAGTGGTTACAGACAGTTACATCATTGCCGGTCTTAGTGAAAGGAATTATAACAG 1200
consensus_11528#2      ATATGAAGAACTTGCAAAGCACAAACTGCCAAAGATGGTTTATGATTTCTATGCTGTTGA 270
                                                                                   

consensus_11528#1      CACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATG 725
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      CACAAGACACTAGAATTGCTATAGAATACGGTGCAGCTGGTATCATCATGTCCAACCATG 1260
consensus_11528#2      CGCAGAAGACCAATGGACTCTCAGGGAGAACAGTGAGGCATTCTCCAGAATTTTGTTTCA 330
                                                                                   

consensus_11528#1      GCGGCCGCCAGCTAGATTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATA 785
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GCGGCCGCCAGCTAGACTATCTTCCTGCAACCATCAGCTGTCTAGAAGAGCTATGCCATA 1320
consensus_11528#2      GCCGGTTGTATTGGTTGATGTGTCCTGTATCGACATGTCTATGAGTGTCTTAGGCTACAA 390
                                                                                   

consensus_11528#1      TGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCA 845
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      TGTAACTCTCTTTTCAATCTTAATGAAATTTGGTCGGCTCCTTCACCGACTCAGCAATCA 1380
consensus_11528#2      TATTTCCATGCCCATTATGATTGCTCCTACGGCTTTGCACAAATTGGCACATCCTGAAGG 450
                                                                                   

consensus_11528#1      GCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCG 905
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GCTGTGTAGAAGAGGTTGTCAGGGAAGCAAATGGGCGTGTGCCGGTGTTCATCGACAGCG 1440
consensus_11528#2      AGAGCTTGCTACTGCCAGAGCTGCAGCTGCTGCAGAAACTATAATGTATTGAAGAGGTTA 510
                                                                                   

consensus_11528#1      GTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTA 965
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GTTTTCGCCGCGGCACCGACGTGTTCAAGGCCCTGGCATTGGGAGCTTCAGGGGTATTTA 1500
consensus_11528#2      ATTTGGCAGGGCCTGGAGTTCGTTTCTTCCAACTTTCAATATACAAGGACAGGAACTTAG 570
                                                                                   

consensus_11528#1      TTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGC-- 1023
consensus_11528#3      ---------------------------------------------------GAAGCGT-- 7
consensus_11528#0      TTGGTAGGCCGGTGCTGTTCTCCCTCGCCATCGACGGCGAGGCCGGCGTGAGGAACGC-- 1558
consensus_11528#2      TGCAACAGCTTATCCAAAGGGCTGAAAAGGCTGGCTATAAGGCAATTGTACTGACTGTTG 630
                                                                            *  *   

consensus_11528#1      --GCTGCGGATGCTGAGAGACGAGCTGGAGATC--ACCATGGCGCTC-AGC--GGCTGC- 1075
consensus_11528#3      --GCGGAATG-GCTGAGAGACGAGCTGGAGATTCACCCATTGGGCTCCAGCCGGCCTGGC 64
consensus_11528#0      --GCTGCGGATGCTGAGAGACGAGCTGGAGATC--ACCATGGCGCTC-AGC--GGCTGC- 1610
consensus_11528#2      ATGCTCCATGGCTTGGTCGCAGGGAAGCTGATGTCAAGAACAGGTTC-ACCTTGCCTCAA 689
                         **         **   *  * *  *  ***      *    * ** * *  * **   

consensus_11528#1      -ACGTCGGTGAAGGAG-ATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCC 1133
consensus_11528#3      ANCGTCGGTGAAGGAGGATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATC-GCC 123
consensus_11528#0      -ACGTCGGTGAAGGAG-ATCACGCGCGGCCACGTCGTCACCGAGAGCGACAGGATCCGCC 1668
consensus_11528#2      AATGTCA-TGTTGAAG-ATCTTTGAGGGGCTGGATNCAGGGAAGATAGATGAGACGAATG 747
                          ***  **  * ** ***      ** *  *         ***  **   **      

consensus_11528#1      GTTGT--TCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTT 1191
consensus_11528#3      GTTGT--TCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTT 181
consensus_11528#0      GTTGT--TCTCGGCTGTAGTGTACCCAGGTTTCCTTTGCGTTTGCGTTCTTGGGAGTGTT 1726
consensus_11528#2      GTTCTGGTCTTGCTGCCTATGTCGCTAGCCAGATTGACCGCTCTTTTTCTTGGAAGGATA 807
                       *** *  *** *       ***  * **      *   ** *    ******* **  * 

consensus_11528#1      TTGGCTGCCTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATC 1251
consensus_11528#3      TTGGCTGACTGTGNNAAANTCTAATTT--------------------------------- 208
consensus_11528#0      TTGGCTGACTGTGGAAAATTCTAATTTGTTTTATTGTGATGTTTTCTGATCTATTATATC 1786
consensus_11528#2      TCAAGTGGTTACAGACAGTT---------------------------------------- 827
                       *    **  *      *  *                                        

consensus_11528#1      GACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAAGGCA 1311
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GACCCTCTCATGGGGTATATATAGGAGTACATAGGGGATAGAGACTTGGAGTATAATACA 1846
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      AGTAAGAGTAGATTTATCTCTAAAAAAACCCTAAAAGG---------------------- 1349
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      AGTAAGAGTAGATTTATCTCTAGGATTCTATCTTTAGGACTCTATCTTATCTCTAGGAGT 1906
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      CAATCTCTAGGATATATCTTATCTCTATATTTGTATTTGACTCTTATCTCTAACTAACAC 1966
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATTATATTTCTAACAAAAACCCTCAGTCGTAACGGGAGCGAAGCGAACGATTGCGACTGG 2026
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATTTGAAATCTTCTATTTCTTCATCTTTCTTTGACTCACCATCATCGACTGCATCTCTGA 2086
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      TGGACGGTCCTCCACCTGGTGCCTGCGTCCCCTTCTGTGTCGTCCCTTGACTCTCCTCTA 2146
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      TTCCCTCCCGCAGTCATAGCGGGAGTGTCATGGACGATAGCGATGACACGGACGCTTGGA 2206
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      CTGGAGTTTTCGTCAATGATTTTTGTTGTAGACGTTCGTCAATGTAGCCGATCATGAAGT 2266
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      AACTGTGGTTGTCGGTGTAGCCGCATATAGCCAAAGGCGAAAAAAAAAAAAATTTACGCC 2326
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      ATGGTGTGAAGACAAAAACTGTAATTGTTAGCATCTTGCACCTTGTAGATGTCAGAGGAT 2386
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GCCATTAGGGACCTCTTGCATATGTCAGAGGACGTCGTTGGCAATGAGGCCACCACTTTG 2446
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GTTGGTCCTTCTGCGCCGTATAGCGGTCACCACAATAGTGATGCCGGGTTGATGCAGTCG 2506
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      TTGTAGTCGTACATGACGTGATCGATGCCGTTGTCGGTGACGCGGTCGTTGCCGTCGTAG 2566
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      AGGACACGGTCGATGTCGTCGATGAAGCGTCTTGCAGATTAATCTGTCAGAGGACGCGAG 2626
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GTGTCCATCTATGTAGACGAGTCGGCAGCGGCGATGCAGATCGATCCATGGATGAGGCCG 2686
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GATGGTATGATGCTTGTTGACGTTGTCTGCTCCTGTAACACCTGCCGCATTGCTCCTGAC 2746
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GATCATATGGTTTTCTGTGGCTAGCTAATAGATCTAAAACTAATTATTAGAAAACGCATC 2806
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      TAATGATATGCGGTAAACTAATCTGTAAATGATTGGAGAGGCTAGCTAGCTAATGCGGTG 2866
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      CGGTGCCCCAGGGAGAAATTGATCTCATCTCCCTGGGGCAGCGCGGATGGAACCTAGCTG 2926
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ------------------------------------------------------------
consensus_11528#3      ------------------------------------------------------------
consensus_11528#0      GAACCGAGGATCGATCGACGTTTGTCTACGGCTCTGATACCATGTAGAAAATCTAATACG 2986
consensus_11528#2      ------------------------------------------------------------
                                                                                   

consensus_11528#1      ---------------
consensus_11528#3      ---------------
consensus_11528#0      CTGTATTTTGGTATT 3001
consensus_11528#2      ---------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)