cluster # 11530

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Oryza sativa
cluster # 11530 cluster # 11530 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11530#0 length = 876 sequences # 9
consensusID : consensus_11530#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 876
fasta sequence
                              [TTTTGAAGGGAAGATTTCAGGCCACACAACTTGAGCAGAGGAAGGATGGAAGCGGCGGCGGCTGCCTCCACCGGCGAACTTTTGACAGGCAAAAGTTCAGCGCCTCTACCCCACAAGAGGCGATCGCGAGACACTACGCTCTGCTGCTGCGCGCATCGCCAGCAGAAAATCGCAGCATTTGCAGGCTCTCGCATCATTTTCAGTCGCCACGTGATCCAGGT-GGTGGT-CGTCTGCGCGGCTCGGCGGAGGAGGGCGGACATCCAGTCGGAGACGT-ACGTGCTGATGGAGCCAGGGGAGGAGGAGGAGTTCGTGAG-C-AAGGAGGAGCTGGAGGGCAGGCTGAGGGGGTGGCTGGAGCGGTGGCCCGGCGGCGAGCTGCCGCCGGACCTCGCGAGGTTCGACACCGTCGACGACGCCGTGTCGTACCTCGTCCGGTCCGTCTGCGAGCTGGAGATCGACGGCGAGGTCGGCTCCGTGCAGTGGTACCAGGTTCAGCTGGAGTAGAGTGGTTCTTGTGTGGAATGGAATGAACGCGCGATCGACGTGGAGTGATAGTTTATACACGTACGTAGTAATCTTCAACGCGACACCATTTATCTTTTTCAGATTTAGAATTCTACGGAACCGATACTCTACTCTGAAAAGTAAGAATTTTACAGAGACTAAAATTCAACCCGTGCGAAATTCCTGTAGAATTCATTCGTCCAGAAAAAAAAAGGGGCACATTGTGTCATTGTCCCTCGTAGCGTAAATGATGTCCCTCGTCGTTCTCTCGTGTCACAATTCTTTTCTGTTTACTTCAAAAAAAAAAATCTACGTTTCTAGAAAAAAAAATTCTTATACTCCCTCTATTACTATATAATTATCACCATCGATTAA]

[+] EMBL AK063070             [TTTTGAAGGGAAGATTTCAGGCCACACAACTTGAGCAGAGGAAGGATGGAAGCGGCGGCGGCTGCCTCCACCGGCGAACTTTTGACAGGCAAAAGTTCAGCGCCTCTACCCCACAAGAGGCGATCGCGAGACACTACGCTCTGCTGCTGCGCGCATCGCCAGCAGAAAATCGCAGCATTTGCAGGCTCTCGCATCATTTTCAGTCGCCACGTGATCCAGGT GGTGGT CGTCTGCGCGGCTCGGCGGAGGAGGGCGGACATCCAGTCGGAGACGT ACGTGCTGATGGAGCCAGGGGAGGAGGAGGAGTTCGTGAG C AAGGAGGAGCTGGAGGGCAGGCTGAGGGGGTGGCTGGAGCGGTGGCCCGGCGGCGAGCTGCCGCCGGACCTCGCGAGGTTCGACACCGTCGACGACGCCGTGTCGTACCTCGTCCGGTCCGTCTGCGAGCTGGAGATCGACGGCGAGGTCGGCTCCGTGCAGTGGTACCAGGTTCAGCTGGAGTAGAGTGGTTCTTGTGTGGAATGGAATGAACGCGCGATCGACGTGGAGTGATAGTTTATACACGTACGTAGTAATCTTCAACGCGACACCATTTATCTTTTTCAGATTTAGAATTCTACGGAACCGATACTCTACTCTGAAAAGTAAGAATTTTACAGAGACTA                                                                                                                                                                                                                      ]
[+] EMBL CF333934             [ gagtagaaaAAGATTTCAGGCCACACAACTTGAGCAGAGGAAGGGTGGAAGCGGCGGCGGCTGCCTCCACCGGCGAACTTTTGACAGGCAAAAGTTCAGCGCCTCTACCCCACAAGAGGCGATCGCGAGACACTACGCTCTGCTGCTGCGCGCATCGCCAGCAGAAAATCGCAGCATTTGCAGGCTCTCGCATCATTTTCAGTCGCCACGTGATCCAGGTGGGTGGT CGTCTGCGCGGCTCGGCGGAGGAGGGCGGACATCCAGTCGGAGACGT ACGTGCTGATGGAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS15783A            [                     CCACACAACTTGAGCAGAGGAAGGATGGAAGCGGCGGCGGCTGCCTCCACCGGCGAACTTTTGACAGGCAAAAGTTCAGCGCCTCTACCCCACAAGAGGCGATCGCGAGACACTACGCTCTGCTGCTGCGCGCATCGCCAGCAGAAAATCGCAGCATTTGCAGGCTCTCGCATCATTTTCAGTCGCCACGTGATCCAGGT GGTGGT CGTCTGCGCGGCTCGGCGGAGGAGGGCGGACATCCAGTCGNAGACGTAACGTGCTGATGGAGCCAGGGGAGGAGGAGGAGTTCGTGAG C AAGGAGGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU162115             [                             CTTGAGCAGAGGAAGGATGGAAGCGGCGGCGGCTGCCTCCACCGGCGAACTTTTGACAGGCAAAAGTTCAGCGCCTCTACCCCACAAGAGGCGATCGCGAGACACTACGCTCTGCTGCTGCGCGCATCGCCAGCAGAAAATCGCAGCATTTGCAGGCTCTCGCATCATTTTCAGTCGCCACGTGATCCAGGT GGTGGT CGTCTGCGCGGCTCGGCGGAGGAGGGCGGACATCCAGTCGGAGACGTAACGTNCTGATGGAGCCAGGGGAGGAGGAGGAGTTCGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU032894             [                             CTTGAGCAGAGGAAGGATGGAAGCGGCGGCGGCTGCCTCCACCGGCGAACTTTTGACAGGCAAAAGTTCAGCGCCTCTACCCCACAAGAGGCGATCGCNAGACACTACGCTCTGCTGCTGCGCGCATCGCCAGCAGAAAATCGCAGCATTTGCAGGCTCTCGCATCATTTTCAGTCGCCACGTGATCCAGGT GGTGGT CGTCTGCGCGGCTCGGCGGAGGAGGGCGGACATCCAGTCGGAGA GT ACGTGCTGATGGAGCCAGGGGAGGAGGAGGAGTTCGTGAG CAAAGGAGGAGCTGGAGGGCAGGCTGAGGGGGTGGCTGGAGCGGTGGCCCGGCGGCGActn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU162103             [                                                                                                                                                            CGCCAGCAG AAATCGCAGCATTTGCAGG TCTCGCATCATTTTCAGTCGCCACGTGATCCAGGT GGTGGT CGTCTGCGCGGCTCGGCGGNGGAGGGCGGACATCCAGTCGGAGACGT ACGTGCTGATGGAGCCAGGGGAGGAGGAGGAGTTCGTGAG C AAGGAGGAGCTGGAGGGCAGGCTGAGGGGGTGGCTGGAGCGGTGGCCCGGCGGCGAGCTGCCGCCGGACCTCGCGAGGTTCGACACCGTCGACGACGCCGTGTCGTACCTNNTCCGGTCCGTCTGCGAGCTGGAGATCGACGGCGAGGTCGGCTCCGTGCAGTGGTACCAGGTTCAGCTGGAGTAGAGTGGTTCTTGTGTGGAATGGAATGAACGCGCGATCGACGTGGAGTGATAGTTTATACACGTACGTAGTAATCTTCAACGCGACACCATTTATCTTTTTCAGATTTAGAATTCTACGGAACCGATACTCTACTCTGAAAAGTAAGAATTTTACAGAGACTAAAATTCAACCCGTGCGAAATTCCTGTAGAATTCATTCGTCCAGAAAAAAAAAGGGGCACATTGTGTCATTGTCCCTCGTAGCGTAAATGATGTCCCTCGTCGTTCTCTCGTGTCACAATTCTTTTCTGTTTACTTCAAAAAAAAAAA                                                                   ]
[+] EMBL AU162116             [                                                                                                                                                                                                   ATTTTCAGTCGCCNCGTGATCCAGGT GGTGGTNCGTCTGCGCGGCTCGGCGGAGGNGGGCGGACATCCAGTCGGAGACGT ACGTGCTGATGGAGCCAGGGGAGGAGGAGGAGTTCGTGAGCC AAGGAGGAGCTGGAGGGCAGGCTGAGGGGGTGGCTGGANCGGTGGCCCGGCGGCGAGCTGCCGCCGGACCTCGCGAGGTTCGACACCGTCGACGACGCCGTGTCGTNCCTCNTCCGGTCCGTCTGCGAGCTGGAGATCGACGGCGAGGTCGGCTCCGTGCAGTGGTACCAGGTTCAGCTGGAGTAGAGTGGTTCTTGTGTGGAATGGAATGAACGCGCGATCGACGTGGAGTGATAGTTTATACACGTACGTAGTAATCTTCAACGCGACACCATTTATCTTTTTCAGATTTAGAATTCTACGGAACCGATACTCTACTCTGAAAAGTAAGAATTTTACAGAGACTAAAATTCAACCCGTGCGAAATTCCTGTAGAATTCATTCGTCCAGAAAAAAAAAGGGGCACATTGTGTCATTGTCCCTCGTAGCGTAAATGATGTCCCTCGTCGTTCTCTCGTGTCACAATTCTTTTCTGTTTACTTCAAAAAAAAAAA                                                                   ]
[-] EMBL CF333935             [                                                                                                                                                                                                                                                                                                                                                                                                                                    TGT GTACCTCGTCCGGTCCGTCTGCGAGCTGGAGATCGACGGCGAGGTCGGCTCCGTGCAGTGGTACCAGGTTCAGCTGGAGTAGAGTGGTTCTTGTGTGGAATGGAATGAACGCGCGATCGACGTGGAGTGATAGTTTATACACGTACGTAGTAATCTTCAACGCGACACCATTTATCTTTTTCAGATTTAGAATTCTACGGAACCGATACTCTACTCTGAAAAGTAAGAATTTTACAGAGACTAAAATTCAACCCGTGCGAAATTCCTGTAGAATTCATTCGTCCAGAAAAAAAAAGGGGCACATTGTGTCATTGTCCCTCGTAGCGTAAATGATGTCCCTCGTCGTTCTCTCGTGTCACAATTCTTTTCTGTTTACTTCATATAATCTGCTCTACGTTTCTAGAAAAAAAAA                                             ]
[+] EMBL AU162198             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACGGAACCGATACTCTACTCTGAAAAGTAAGAATTTTACAGAGACTAAAATTCAACCCGTGCGAAATTCCTGTAGAATTCATTCGTCCAGAAAAAAAAAGGGGCACATTGTGTCATTGTCCCTCGTAGCGTAAATGATGTCCCTCGTCGTTCTCTCGTGTCACAATTCTTTTCTGTTTACTTCATATAATCTGCTCTACGTTTCTAGAAATATGTTTTCTTATACTCCCTCTATTACTATATAATTATCACCATCGATTAA]




>consensus_11530#0
TTTTGAAGGGAAGATTTCAGGCCACACAACTTGAGCAGAGGAAGGATGGAAGCGGCGGCG
GCTGCCTCCACCGGCGAACTTTTGACAGGCAAAAGTTCAGCGCCTCTACCCCACAAGAGG
CGATCGCGAGACACTACGCTCTGCTGCTGCGCGCATCGCCAGCAGAAAATCGCAGCATTT
GCAGGCTCTCGCATCATTTTCAGTCGCCACGTGATCCAGGTGGTGGTCGTCTGCGCGGCT
CGGCGGAGGAGGGCGGACATCCAGTCGGAGACGTACGTGCTGATGGAGCCAGGGGAGGAG
GAGGAGTTCGTGAGCAAGGAGGAGCTGGAGGGCAGGCTGAGGGGGTGGCTGGAGCGGTGG
CCCGGCGGCGAGCTGCCGCCGGACCTCGCGAGGTTCGACACCGTCGACGACGCCGTGTCG
TACCTCGTCCGGTCCGTCTGCGAGCTGGAGATCGACGGCGAGGTCGGCTCCGTGCAGTGG
TACCAGGTTCAGCTGGAGTAGAGTGGTTCTTGTGTGGAATGGAATGAACGCGCGATCGAC
GTGGAGTGATAGTTTATACACGTACGTAGTAATCTTCAACGCGACACCATTTATCTTTTT
CAGATTTAGAATTCTACGGAACCGATACTCTACTCTGAAAAGTAAGAATTTTACAGAGAC
TAAAATTCAACCCGTGCGAAATTCCTGTAGAATTCATTCGTCCAGAAAAAAAAAGGGGCA
CATTGTGTCATTGTCCCTCGTAGCGTAAATGATGTCCCTCGTCGTTCTCTCGTGTCACAA
TTCTTTTCTGTTTACTTCAAAAAAAAAAATCTACGTTTCTAGAAAAAAAAATTCTTATAC
TCCCTCTATTACTATATAATTATCACCATCGATTAA
clustalw multiple alignements is not computed in this case