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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11538#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2121 fasta sequence
[GAGGCTGCTCGCCGCGCCGCGCCGCGCCGCCGCGCTTGGTCATCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAGCTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGCCGCGTCGTCGCCATAGACACCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGGAAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATGTTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGTGAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCTTCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGCAAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTGATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGTGAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATATGGACTCTCTAACTTTTGGTGCTAGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTCGAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGTATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGTTTTATCACGTTTTTTCTTTTTTCACACACTTAATATTAGATTCTACCAATGATATCATATTACCATGCTGTATTCAGAATTTAGAGGTTGCTTCATTACTTTCTCATGTCATGGGTGCTTTAGACATAGCATTCTCCATTGCTAATGTATCTATAATAGAAAT-GTGGAAGTGTGATATCCTATTCTTGAGTTAAAAACTTCAAATTATATTTTCTGCAATTGCTTTTATAGCTCAACGCTTTGTGCTTCTGTTGGCTAAATCTTGAATAAATGCCACTCAAAGTTCTAAGAAGATTGTAGAGATATCATAATGCTGGAGAATTGAATGTTGTGTATGCTGCATCCTTCCTTGACTATCTTTATCATAAATTTATACAAGTCCTTGCATTTTATTATTACTTCTTGTCTTGTTTTGAATAGGT-ATTGGGGGACAGAGAGCTTTGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAAGGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTAACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAAACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGATAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGAACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAGGGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGATCAAGCTTGAACTTCATACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTACATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTG-AAGCTTTGACTGACA-CCATCTACAGCTTCATGAAGAATTAGTGATTTCTTGAAATGCGTTGAGCCTATGCTATTATTGTAGTTCAGCCTTTTGCCTTGTAAAATCAAGCTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACCTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGGCTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACTTGAATTGTGATAGCCTTAGCATGANCTGTATTAATCTTTAAAAAAAAAAAA]
[+] EMBL AK069540 [GAGGCTGCTCGCCGCGCCGCGCCGCGCCGCCGCGCTTGGTCATCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAGCTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGCCGCGTCGTCGCCATAGACACCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGGAAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATGTTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGTGAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCTTCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGCAAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTGATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGTGAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATATGGACTCTCTAACTTTTGGTGCTAGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTCGAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGTATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGTTTTATCACGTTTTTTCTTTTTTCACACACTTAATATTAGATTCTACCAATGATATCATATTACCATGCTGTATTCAGAATTTAGAGGTTGCTTCATTACTTTCTCATGTCATGGGTGCTTTAGACATAGCATTCTCCATTGCTAATGTATCTATAATAGAAAT GTGGAAGTGTGATATCCTATTCTTGAGTTAAAAACTTCAAATTATATTTTCTGCAATTGCTTTTATAGCTCAACGCTTTGTGCTTCTGTTGGCTAAATCTTGAATAAATGCCACTCAAAGTTCTAAGAAGATTGTAGAGATATCATAATGCTGGAGAATTGAATGTTGTGTATGCTGCATCCTTCCTTGACTATCTTTATCATAAATTTATACAAGTCCTTGCATTTTATTATTACTTCTTGTCTTGTTTTGAATAGGT ATTGGGGGACAGAGAGCTTTGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAAGGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTAACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAAACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGATAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGAACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAGGGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGATCAAGCTTGAACTTCATACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTACATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTG AAGCTTTGACTGACA CCATCTACAGCTTCATGAAGAATTAGTGATTTCTTGAAATGCGTTGAGCCTATGCTATTATTGTAGTTCAGCCTTTTGCCTTGTAAAATCAAGCTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACCTTTTGGCTATAATCTGAAATTTTG ]
[+] EMBL CF324120 [ GGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGTATCCTTAGTGGCTGTGACTACTGCGAGAAT TTAGAGGTTTTATCACGTTTTTTCTTTTTT ACACACTTAATATTAGATTCTACCAATGATATCATATTACCATGCTGTATTCAGAATTTAGAGGTTGCTTCATTACTTTCTCATGTCATGGGTGCTTTAGACATAGCATTCTCCATTGCTAATGTATCTATAATAGAAATGGTGGAAGTGTGATATCCTATTCTTGAGTTAAAAACTTCAAATTATATTTTCTGCAATTGCTTTTATAGCTCAACGCTTTGTGCTTCTGTTGGCTAAATCTTGAATAAATGCCACTCAAAGTTCTAAGAAGATTGTAGAGATATCATAATGCTGGAGAATTGAATGTTGTGTATGCTGCATCCTTCCTTGACTATCTTTATCATAAATTTATACAAGTCCTTGCATTTTATTATTACTTCTTGTCTTGTTTTGAATAGGTAATTGGGGGACAGAGAGCTTTGAAACTTATT ]
[+] EMBL AU033159 [ tgaAATC GGNACTGCCCTATCCCCATGANTTGGTTGGCTGAAANCTTTGACTGACACCCATCTACAGCTCCATGAAGAATTAGTGATTCCTTGAAATNCGTTGAGCCTATGCTATTATTGTAGTTCAGCCTTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGANCACCTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGGCTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACTTGAATTGTGATAGCCTTAGCATGANCTGTATTAATCTTTAAAAAAAAAAAA]
consensusID : consensus_11538#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1727 fasta sequence
[CCGCGTCGCGTGGCCCGAAGCGAGGGAGCGGAGGCTGCTCGCCGCGCCGCGCCGCGCCGCCGCGCTTGGTCATCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAGCTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGCCGCGTCGTCGCCATAGACGCCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGGAAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATGTTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGTGAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCTTCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGCAAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTGATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGTGAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATA-TGGACTCTCTAACTTTTGGTGCTAGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTCGAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGTATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGTATTGGGGGACAGAGAGCTTTGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAAGGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTAACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAAACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGATAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGAACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAGGGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGCTCAAGCTTGAACTTCATACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTACATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTGAAGCTTTGACTGACACCATCTACAGCTTCATGAAGAA-TTAGTGATTTCTTGAAATGCGTTGAGCCTATGCTATTATTGTAGTTCAGCC-TTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACCTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGGCTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACTTGAATTGTGATAGCCTTAGCATGATCTGTATTAATCTTAAAAAAAAAAA]
[+] EMBL AK062149 [CCGCGTCGCGTGGCCCGAAGCGAGGGAGCGGAGGCTGCTCGCCGCGCCGCGCCGCGCCGCCGCGCTTGGTCATCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAGCTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGCCGCGTCGTCGCCATAGACACCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGGAAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATGTTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGTGAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCTTCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGCAAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTGATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGTGAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATA TGGACTCTCTAACTTTTGGTGCTAGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTCGAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGTATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGTATTGGGGGACAGAGAGCTTTGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAAGGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTAACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAAACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGATAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGAACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAGGGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGCTCAAGCTTGAACTTCATACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTACATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTGAAGCTTTGACTGACACCATCTACAGCTTCATGAAGAA TTAGTGATTTCTTGAAATGCGTTGAGCCTATGCTATTATTGTAGTTCAGCC TTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACC ]
[+] EMBL AB088391 [ TCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAGCTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGCCGCGTCGTCGCCATAGACGCCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGGAAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATGTTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGTGAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCTTCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGCAAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTGATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGTGAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATA TGGACTCTCTAACTTTTGGTGCTAGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTCGAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGTATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGTATTGGGGGACAGAGAGCTTTGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAAGGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTAACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAAACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGATAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGAACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAGGGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGCTCAAGCTTGAACTTCATACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTACATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTGAAGCTTTGACTGACACCATCTACAGCTTCATGAAGAA TTAGTGATTTCTTGAAATGCGTTGAGCCTATGCTATTATTGTAGTTCAGCC TTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACCTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGGCTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACTTGAATTGTGATAGCCTTAGCATGATCTGTATTAATCTTAAAAAAAAAAA]
[+] EMBL AB080084 [ TCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAGCTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGCCGCGTCGTCGCCATAGACGCCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGGAAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATGTTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGTGAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCTTCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGCAAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTGATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGTGAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATA TGGACTCTCTAACTTTTGGTGCTAGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTCGAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGTATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGTATTGGGGGACAGAGAGCTTTGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAAGGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTAACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAAACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGATAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGAACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAGGGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGCTCAAGCTTGAACTTCATACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTACATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTGAAGCTTTGACTGACACCATCTACAGCTTCATGAAGAA TTAGTGATTTCTTGAAATGCGTTGAGCCTATGCTATTATTGTAGTTCAGCC TTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACCTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGGCTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACTTGAATTGTGATAGCCTTAGCATGATCTGTATTAATCTTAAAAAAAAAAA]
[+] EMBL AU108651 [ GTTTGATGGTGAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCTTCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGCAAAAGGNCTGTAAAGGTCACAAAAAAGCACAATGNAGACTGTAAGAGGCTGTTAAGCTTGATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTNCGCA CTCCTTGTGAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATATTGGACTCTCTAANTTTTGGTGCTAGA ]
[-] EMBL CB633748 [ AAAATCTTAGCCAGACAAGGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTAACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAAACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGATAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGAACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAGGGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGCTCAAGCTTGAACTTCATACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTACATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTGAAGCTTTGACTGACACCATCTACAGCTTCATGAAGAA TTAGTGATTTCTTGAAATGCGTTGAGCCTATGCTATTATTGTAGTTCAGCC TTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACCTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGGCTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACTTGAATTGTGATAGCCTTAGCATGATCTGTA ]
[+] EMBL AU108650 [ aAAGAATTTAGTGATTTCNTGAAATCCGNTGAGCCTATGCTANTATTGTAGTTCAGCCTTTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTCTCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCACCTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGNACGAGCAGGAAACTGGTTGAGGCTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACTTGAATTGTGATAGCCTTAGCATGATCTGTATTAATCTTAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11538#0 ------------------------------GAGGCTGCTCGCCGCGCCGCGCCGCGCCGC 30
consensus_11538#1 CCGCGTCGCGTGGCCCGAAGCGAGGGAGCGGAGGCTGCTCGCCGCGCCGCGCCGCGCCGC 60
******************************
consensus_11538#0 CGCGCTTGGTCATCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAG 90
consensus_11538#1 CGCGCTTGGTCATCTCCGCCGCCGCCGGCCGTCGCCATGGGCATCAAGGGTTTGACGAAG 120
************************************************************
consensus_11538#0 CTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGC 150
consensus_11538#1 CTGCTGGCGGAGCACGCGCCGGGGGCGGCGGTGAGGAGGCGGGTGGAGGATTACCGCGGC 180
************************************************************
consensus_11538#0 CGCGTCGTCGCCATAGACACCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGG 210
consensus_11538#1 CGCGTCGTCGCCATAGACGCCAGCCTCAGCATCTACCAGTTCCTCATTGTGGTAGGAAGG 240
****************** *****************************************
consensus_11538#0 AAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATG 270
consensus_11538#1 AAAGGAACAGAAGTTCTGACCAATGAGGCTGGTGAAGTCACAAGTCATCTGCAGGGCATG 300
************************************************************
consensus_11538#0 TTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGT 330
consensus_11538#1 TTGAACCGAACTGTTAGGATTCTAGAAGCAGGAATAAAACCTGTTTTTGTGTTTGATGGT 360
************************************************************
consensus_11538#0 GAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCT 390
consensus_11538#1 GAGCCACCTGACATGAAGAAAAAGGAACTGGCAAAAAGGTCTTTGAAGAGAGATGGTTCT 420
************************************************************
consensus_11538#0 TCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGC 450
consensus_11538#1 TCCGAAGATCTAAATAGAGCTATTGAGGTTGGAGATGAGGATTTAATTGAAAAATTTAGC 480
************************************************************
consensus_11538#0 AAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTG 510
consensus_11538#1 AAAAGGACTGTAAAGGTCACAAAAAAGCACAATGAAGACTGTAAGAGGCTGTTAAGCTTG 540
************************************************************
consensus_11538#0 ATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGT 570
consensus_11538#1 ATGGGTGTCCCTGTAGTTCAGGCACCAGGGGAGGCAGAAGCACAGTGCGCAGCACTCTGT 600
************************************************************
consensus_11538#0 GAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATATGGACTCTCTAACTTTTGGTGCT 630
consensus_11538#1 GAAAATCACAAGGTCTTTGCTATAGCTTCGGAGGATATGGACTCTCTAACTTTTGGTGCT 660
************************************************************
consensus_11538#0 AGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTC 690
consensus_11538#1 AGAAGGTTTCTTCGCCATTTAACCGACCTGAGTTTTAAGAGATCTCCTGTAACAGAATTC 720
************************************************************
consensus_11538#0 GAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGT 750
consensus_11538#1 GAAGTGTCAAAGGTTTTGGAGGAACTTGGACTCACAATGGATCAGTTCATTGATTTGTGT 780
************************************************************
consensus_11538#0 ATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGTTTTATCACGTTTTTTCTTTTT 810
consensus_11538#1 ATCCTTAGTGGCTGTGACTACTGCGAGAATATTAGAGGT--------------------- 819
***************************************
consensus_11538#0 TCACACACTTAATATTAGATTCTACCAATGATATCATATTACCATGCTGTATTCAGAATT 870
consensus_11538#1 ------------------------------------------------------------
consensus_11538#0 TAGAGGTTGCTTCATTACTTTCTCATGTCATGGGTGCTTTAGACATAGCATTCTCCATTG 930
consensus_11538#1 ------------------------------------------------------------
consensus_11538#0 CTAATGTATCTATAATAGAAATGTGGAAGTGTGATATCCTATTCTTGAGTTAAAAACTTC 990
consensus_11538#1 ------------------------------------------------------------
consensus_11538#0 AAATTATATTTTCTGCAATTGCTTTTATAGCTCAACGCTTTGTGCTTCTGTTGGCTAAAT 1050
consensus_11538#1 ------------------------------------------------------------
consensus_11538#0 CTTGAATAAATGCCACTCAAAGTTCTAAGAAGATTGTAGAGATATCATAATGCTGGAGAA 1110
consensus_11538#1 ------------------------------------------------------------
consensus_11538#0 TTGAATGTTGTGTATGCTGCATCCTTCCTTGACTATCTTTATCATAAATTTATACAAGTC 1170
consensus_11538#1 ------------------------------------------------------------
consensus_11538#0 CTTGCATTTTATTATTACTTCTTGTCTTGTTTTGAATAGGTATTGGGGGACAGAGAGCTT 1230
consensus_11538#1 -----------------------------------------ATTGGGGGACAGAGAGCTT 838
*******************
consensus_11538#0 TGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAA 1290
consensus_11538#1 TGAAACTTATTCGTCAGCATGGTTATATAGAAGAAGTAGTGCAAAATCTTAGCCAGACAA 898
************************************************************
consensus_11538#0 GGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTA 1350
consensus_11538#1 GGTATAGTGTCCCAGAAGACTGGCCTTACCAGGAAGTTCGGGCATTGTTTAAGGAACCTA 958
************************************************************
consensus_11538#0 ACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAA 1410
consensus_11538#1 ACGTTTGTACAGATATTCCAGACTTCCTGTGGACCCCACCAGATGAGGAGGGCCTTATAA 1018
************************************************************
consensus_11538#0 ACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGA 1470
consensus_11538#1 ACTTTTTGGCAGCCGAAAATAATTTCAGTCCTGATCGAGTAGTAAAGTCTGTAGAAAAGA 1078
************************************************************
consensus_11538#0 TAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGA 1530
consensus_11538#1 TAAAGGCTGCTAATGATAAATTTTCCCTTGGGCGAGGGAAGCTTTTGGCACCAGTAGCGA 1138
************************************************************
consensus_11538#0 ACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAG 1590
consensus_11538#1 ACTTAACAGGATCTACATCAACTGCAGGGAAGGAACCCAAATGTATCCTGGGTGGTCCAG 1198
************************************************************
consensus_11538#0 GGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGATCAAGCTTGAACTTCA 1650
consensus_11538#1 GGCAAGTCATGAAGGCTAGGTCACCTCTACAAGTGTGCAAGAGCTCAAGCTTGAACTTCA 1258
******************************************* ****************
consensus_11538#0 TACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTA 1710
consensus_11538#1 TACATGACAATTCAAAAGCGTTCATGCTGGGCAGGCGATCAGGATTTCTCAGAATATCTA 1318
************************************************************
consensus_11538#0 CATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTGAAGCTT 1770
consensus_11538#1 CATATGCTTCCATCTGAATCTGGAGCTGCTCTATTTCCATGAGTTGGTTGGCTGAAGCTT 1378
************************************************************
consensus_11538#0 TGACTGACACCATCTACAGCTTCATGAAGAATTAGTGATTTCTTGAAATGCGTTGAGCCT 1830
consensus_11538#1 TGACTGACACCATCTACAGCTTCATGAAGAATTAGTGATTTCTTGAAATGCGTTGAGCCT 1438
************************************************************
consensus_11538#0 ATGCTATTATTGTAGTTCAGCCTTTTGCCTTGTAAAATCAAGCTGAATGCTTGAGCTTTC 1890
consensus_11538#1 ATGCTATTATTGTAGTTCAGCCTTTTGCCTTGTAAAATCAAGTTGAATGCTTGAGCTTTC 1498
****************************************** *****************
consensus_11538#0 TCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCAC 1950
consensus_11538#1 TCACATTTAGCACTGGTTCTCGCTTGAGTGTTGAACGGTGACCATGAAGAATTTGATCAC 1558
************************************************************
consensus_11538#0 CTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGG 2010
consensus_11538#1 CTTTTGGCTATAATCTGAAATTTTGTCAAGGTGCCAGAACGAGCAGGAAACTGGTTGAGG 1618
************************************************************
consensus_11538#0 CTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACT 2070
consensus_11538#1 CTGCTTAACTTTCCTGGTGTCTTCTCTAGGATGTGCATGTACCCCTCTCCATCACATACT 1678
************************************************************
consensus_11538#0 TGAATTGTGATAGCCTTAGCATGANCTGTATTAATCTTTAAAAAAAAAAAA 2121
consensus_11538#1 TGAATTGTGATAGCCTTAGCATGATCTGTATTAATCTTAAAAAAAAAAA-- 1727
************************ ************* **********
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||