cluster # 11544

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Oryza sativa
cluster # 11544 cluster # 11544 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11544#0 length = 2014 sequences # 9
consensusID : consensus_11544#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2014
fasta sequence
                              [CATTTGTTTATATCTCCCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTACGACTCCCACCTCCACCTCCGCCATCCCAATCCGATCTCCCGCGAGCTCCAGATCCACCTCCCGGGTCGCCGCCGAGCTCGCCGCGGCCACCTCCTCGCCGGAATCGGCCGCTCGCGAGCTCCAGCCCGGTGCCCGTTTTCGCGCCATTCGTGCGTGCGAGCTAGCGAGCTAAGCTCCAAGAGCTGCGCCTCCTGCGCTGCGGTGAGGTGCGGCGCTGTGTGAGTCCTCTCGCATTGGGCTTCTGGTTGCTCGGATAGCTTGGGAAGGTGTCACCTTGTTAGTTCCCTCAAATTTCATTGGGCCCTGGTGTAGTAACTTCACATCATAATTACCAGAGTTTGATTACTTTGATGGTGGTAACTTCTAGATGATCTGAACATATGGAGAGGAGATAGAAGTGTCTTGAGTGTTGCAGTAGGACAGCAAGGACATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGTTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCTTATGTTCCTGACACCTGGTACACTGCCCTTTGAGAAATTATGGGAAAAGTTTTTACAGGGTCAGGAGGGAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGTTTGTTGGTCGTGATATTCACAGTGACGCGGTAGTATGGGGAAAGATTTCAATGGTTGATGCAGAGAAGAGACTATTGGCCAATGCACTGGCAGATGTTGATAACCAGTTCTTTGTGTTGCTTTCTGACAGCTGTGTTCCACTGCATACATTTGATTATGTCTATAATTATCTGATGGGAACAAATATCAGCTTCATTGATTGTTTCCGTGATCCTGGCCCTCATGGAAACGGGAGGTATTCTCCTGAGATGCTCCCTGAAATTGAGGAGAAAGACTTCAGGAAGGGTGCCCAGTGGTTTGCAATTACACGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCATCCAAATAAAAAG]

[+] EMBL AK065329             [CATTTGTTTATATCTCCCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTACGACTCCCACCTCCACCTCCGCCATCCCAATCCGATCTCCCGCGAGCTCCAGATCCACCTCCCGGGTCGCCGCCGAGCTCGCCGCGGCCACCTCCTCGCCGGAATCGGCCGCTCGCGAGCTCCAGCCCGGTGCCCGTTTTCGCGCCATTCGTGCGTGCGAGCTAGCGAGCTAAGCTCCAAGAGCTGCGCCTCCTGCGCTGCGGTGAGGTGCGGCGCTGTGTGAGTCCTCTCGCATTGGGCTTCTGGTTGCTCGGATAGCTTGGGAAGGTGTCACCTTGTTAGTTCCCTCAAATTTCATTGGGCCCTGGTGTAGTAACTTCACATCATAATTACCAGAGTTTGATTACTTTGATGGTGGTAACTTCTAGATGATCTGAACATATGGAGAGGAGATAGAAGTGTCTTGAGTGTTGCAGTAGGACAGCAAGGACATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGTTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCTTATGTTCCTGACACCTGGTACACTGCCCTTTGAGAAATTATGGGAAAAGTTTTTACAGGGTCAGGAGGGAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGTTTGTTGGTCGTGATATTCACAGTGACGCGGTAGTATGGGGAAAGATTTCAATGGTTGATGCAGAGAAGAGACTATTGGCCAATGCACTGGCAGATGTTGATAACCAGTTCTTTGTGTTGCTTTCTGACAGCTGTGTTCCACTGCATACATTTGATTATGTCTATAATTATCTGATGGGAACAAATATCAGCTTCATTGATTGTTTCCGTGATCCTGGCCCTCATGGAAACGGGAGGTATTCTCCTGAGATGCTCCCTGAAATTGAGGAGAAAGACTTCAGGAAGGGTGCCCAGTGGTTTGCAATTACACGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCATCC          ]
[+] EMBL CB643787             [                                                                     CCTCCGCCACCCTTAAACGATCTCCCGCGAGCTCCAGATCCACCTCCCGGGTCGCCGCCGAGCTCGCCGCGGCCACCTCCTCGCCGGAATCGGCCGCTCGCGAGCTCCATCCCGGAGCCCGTTTTCGCGCCATTCGTGCGTGCGAGCTATCGAGCTAAGCTCCAAGAGCTGCGCCTCCTGCGCTGCGGTGAGGTGCGGCGCTGTGTGAGTCCTCTCGCATTGGGCTTCTGGTTGCTCGGATAGCTTGGGAAGGAGTCACCTTGTTAATTCCCTCAAATTTCATTGGGCCCTGGTGTAGTAACTTCACATCATAATTACCATAGTTTGATTACTTTGATGGGGGTAACTTCTAGATGATCTGAACATATGGAGAGGAGATAGAATTGTCTTGAGTGTTGCAGTAGGACAGCAAGGACATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGCTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB643788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATTACACGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCACATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCATCCAAATAAAAAG]
[+] EMBL CA999063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACC                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU225410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gccgctAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTATTTTATTGTGCT                                                                                                                                                    ]
[-] EMBL CB651413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCTTATGGAATGGATGGAAGAGACCATGCTATGTTTTTATTAGGAAGTTATACCCTGAAACTGTTGACAGCCTACTGAAGTTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTTTCAAAATCCCATGGGCTTTTTTTTGGGTTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGGCTACAAGACTACACAGGCAGATGGTCATCGCAGCAACTGTGACGGCTTGGAGTTGTTAGTCACTGGGAAGGGTTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATATATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTAAGGCCATTATTATATGAT                                                    ]
[+] EMBL BM418852             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgCCTTGGCATATGGTCTC AAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGC ACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAA GGCTGTGGCGAAATTTGTAGC ATGAC CTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCNTTGATGGTTCTTAGTCC TTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCAaaa                                                                  ]
[+] EMBL OSR3227A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCA             ]
[+] EMBL OSR06041A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAa                                                                                                                      ]




>consensus_11544#0
CATTTGTTTATATCTCCCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTACGACTC
CCACCTCCACCTCCGCCATCCCAATCCGATCTCCCGCGAGCTCCAGATCCACCTCCCGGG
TCGCCGCCGAGCTCGCCGCGGCCACCTCCTCGCCGGAATCGGCCGCTCGCGAGCTCCAGC
CCGGTGCCCGTTTTCGCGCCATTCGTGCGTGCGAGCTAGCGAGCTAAGCTCCAAGAGCTG
CGCCTCCTGCGCTGCGGTGAGGTGCGGCGCTGTGTGAGTCCTCTCGCATTGGGCTTCTGG
TTGCTCGGATAGCTTGGGAAGGTGTCACCTTGTTAGTTCCCTCAAATTTCATTGGGCCCT
GGTGTAGTAACTTCACATCATAATTACCAGAGTTTGATTACTTTGATGGTGGTAACTTCT
AGATGATCTGAACATATGGAGAGGAGATAGAAGTGTCTTGAGTGTTGCAGTAGGACAGCA
AGGACATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGA
TAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCAC
GGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGC
TCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGTTCTTA
GGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCTTATGTTCC
TGACACCTGGTACACTGCCCTTTGAGAAATTATGGGAAAAGTTTTTACAGGGTCAGGAGG
GAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGT
TTGTTGGTCGTGATATTCACAGTGACGCGGTAGTATGGGGAAAGATTTCAATGGTTGATG
CAGAGAAGAGACTATTGGCCAATGCACTGGCAGATGTTGATAACCAGTTCTTTGTGTTGC
TTTCTGACAGCTGTGTTCCACTGCATACATTTGATTATGTCTATAATTATCTGATGGGAA
CAAATATCAGCTTCATTGATTGTTTCCGTGATCCTGGCCCTCATGGAAACGGGAGGTATT
CTCCTGAGATGCTCCCTGAAATTGAGGAGAAAGACTTCAGGAAGGGTGCCCAGTGGTTTG
CAATTACACGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCA
AGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAA
CCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATT
GGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCT
TAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTA
TGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGA
AGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTT
GAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTT
GCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGA
GACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTA
GTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTAT
TGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAA
GAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCA
GATAACAAGAGAAGTACCTCATCCAAATAAAAAG
clustalw multiple alignements is not computed in this case