cluster # 11557

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Oryza sativa
cluster # 11557 cluster # 11557 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11557#0 length = 2534 sequences # 8

consensus_11557#1 length = 499 sequences # 1

consensusID : consensus_11557#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2534
fasta sequence

                              [GAGAATTAGAATTTTCCTCCTCCCTTCCCTTCCCTTCCTCTCGCCGAACCAACGCGGAAGAAGGAGCTCGCCCGCCGGCTAGGGTTTGCCGCACACCCGCCGCCGAGCAGCTAGCACCGGAGTGTTGGGAGGGGAGGCTCGCCCGCCGCCGCCGCCATGCCGCAGTCGGTGCTCGTCGACCGCGCGACGAGCGAGTCGCTCATCGGGCCCGACTGGTCCCTCAACCTCGAGATCTGCGACATCCTCAACCACGACCCCTCCCAAGCCAAAGATGTAGTGAAGTCTATCAAGAAACGCATTGGGCACAAGAACTCAAAGATCCAGCTTCTCGCACTAACATTGCTGGAGACACTGATTAAAAATTGTGGAGACTTTGTTCATATGCACGTTGCTGAGAGGGATATACTCCATGAAATGGTGAAGATAGCTAAGAAAAAGCCTGATTATCATGTAAAAGAGAAGATACTAATTCTGATAGACACTTGGCAAGAAGCTTTTGGTGGTTCCCGTGCAAGATATCCGCAATATTATGTAGCATATCAAGAGCTCCTGCGCGCTGGAGCTGTATTTCCTCAAAGACCAGACAGCTCTGTGCCAATCTATACTCCTCCACAGACTCAACCTCTACGGAATCTTCCTCCAGCTCTGCGTAATACTGAGCGTCAACAAGAAGCACCTGAATCTTCTTCAACACCAGAAGTACCTACACTGAGTTTGACAGAAATCCAGAATGCACGTGGTGTCATGGATGTTCTTTCAGAGATGTTGAATGCTATTGATCCTGGCAACAGAGAGGGTCTAAGACAGGAGGTTATTGTGGACCTTGTGGATCAATGTCGTTCTTACAAGCAGAGGGTGGTACAGCTTGTCAACTCAACCACGGACGAGGAGCTGCTAAGCCAGGGTCTTTCATTGAATGATGATTTACAGCGTGTTCTTGCAAAACACGATGCAATTGCTGCAGGCATAGCAGTTCGTGTAGAAAAACCAAAATCAGTCCAGGCCCGAGGGGACAAGTCTCCATCAATCAAACCAGAAGGGGCAAAACAGCCAGATCAGAGGTCTTCTGAAGCTGCCAGTACCGTGACTCCATTTGAGCAATTAGCGCTTCCAGCACCTGCATCATCCAGCAGTTCCAAACCTCCTGTAGAACCAGCTGTTGGCCCTAGTATTGACCTACTTAGTGGTGATGACTACTTCAAGCCAGAACCTGTTAATTCCCAGGCCCTTGTTTCTGTAGGCAATCCACCTGCTGCTTCAGCCAACAATACCTTGGACCTGGTAGACATGTTTGCACAAAGCAATGTTGGCAACAACCCGAACCCTGCTGTCACCTCTTCTATGTTGAATTCAAATCCTAGTCTCTCTGAGCCACAGCTGTATCCCTCACAGCAGACTGTGCCACCACAACAGCCTTCTCCATACTCTAATGGGTTAACTTCAAATACAATGGCACCGTATGATCAACCCTCTGACATAAACGCCACAGGTTCATGGAATAGTCAATTTGCTCATGGAATGCTTCCTCCACAGCTTCCTCCACAACTTCCTCCACAGCAACCACCAAATTACGGTCAAGGTCAAGATCAGAGTGGTGATCTCCCACCACCACCCTGGGAAACTCAACCTGCAGAAAGTGATCAATTCCAGCCTGGGCAACCTCGTGGGCTAGCAATGCCATCAGGGCAAATTGGAGGCATTCAATCCCAACCTGTTCAAGTTCAGCCCGGGCAAGTTGCACCATTACAACCAATGCTGACCGGGCAACCCACAGGAATGCAGTTTCAGCAAGGGTTTGGGGATCAGCTTGGGGCTCAACAAACACAACCCTTGCACACACAATATGGTGGAATGTATCCTACAATGCA-AGGTAACCAATCAGCTGGCATGTATCCCCA-GCAGATGGCTGGAGATTTCTACCA-GCAACAGATGTATGGTGGTC-AGATGGCTGGTTATGGATACGGTCAGCAGTCTGGAGGATACTATGCTCCAAACGCTGCGTATGGGTATGGCGGT-GCAAACGAGCTTTCTCAGGGAATGAATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACACTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAGTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCAATTATAGTGTGTTTGCTTCTTGCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAG-AAAAACCATTGAACATTCTTTAATGTTTCCTGTAAAGAATTGATATCGTCAAGTATTATACTGGTAGCTACAATCT]

[+] EMBL AK058294             [GAGAATTAGAATTTTCCTCCTCCCTTCCCTTCCCTTCCTCTCGCCGAACCAACGCGGAAGAAGGAGCTCGCCCGCCGGCTAGGGTTTGCCGCACACCCGCCGCCGAGCAGCTAGCACCGGAGTGTTGGGAGGGGAGGCTCGCCCGCCGCCGCCGCCATGCCGCAGTCGGTGCTCGTCGACCGCGCGACGAGCGAGTCGCTCATCGGGCCCGACTGGTCCCTCAACCTCGAGATCTGCGACATCCTCAACCACGACCCCTCCCAAGCCAAAGATGTAGTGAAGTCTATCAAGAAACGCATTGGGCACAAGAACTCAAAGATCCAGCTTCTCGCACTAACATTGCTGGAGACACTGATTAAAAATTGTGGAGACTTTGTTCATATGCACGTTGCTGAGAGGGATATACTCCATGAAATGGTGAAGATAGCTAAGAAAAAGCCTGATTATCATGTAAAAGAGAAGATACTAATTCTGATAGACACTTGGCAAGAAGCTTTTGGTGGTTCCCGTGCAAGATATCCGCAATATTATGTAGCATATCAAGAGCTCCTGCGCGCTGGAGCTGTATTTCCTCAAAGACCAGACAGCTCTGTGCCAATCTATACTCCTCCACAGACTCAACCTCTACGGAATCTTCCTCCAGCTCTGCGTAATACTGAGCGTCAACAAGAAGCACCTGAATCTTCTTCAACACCAGAAGTACCTACACTGAGTTTGACAGAAATCCAGAATGCACGTGGTGTCATGGATGTTCTTTCAGAGATGTTGAATGCTATTGATCCTGGCAACAGAGAGGGTCTAAGACAGGAGGTTATTGTGGACCTTGTGGATCAATGTCGTTCTTACAAGCAGAGGGTGGTACAGCTTGTCAACTCAACCACGGACGAGGAGCTGCTAAGCCAGGGTCTTTCATTGAATGATGATTTACAGCGTGTTCTTGCAAAACACGATGCAATTGCTGCAGGCATAGCAGTTCGTGTAGAAAAACCAAAATCAGTCCAGGCCCGAGGGGACAAGTCTCCATCAATCAAACCAGAAGGGGCAAAACAGCCAGATCAGAGGTCTTCTGAAGCTGCCAGTACCGTGACTCCATTTGAGCAATTAGCGCTTCCAGCACCTGCATCATCCAGCAGTTCCAAACCTCCTGTAGAACCAGCTGTTGGCCCTAGTATTGACCTACTTAGTGGTGATGACTACTTCAAGCCAGAACCTGTTAATTCCCAGGCCCTTGTTTCTGTAGGCAATCCACCTGCTGCTTCAGCCAACAATACCTTGGACCTGGTAGACATGTTTGCACAAAGCAATGTTGGCAACAACCCGAACCCTGCTGTCACCTCTTCTATGTTGAATTCAAATCCTAGTCTCTCTGAGCCACAGCTGTATCCCTCACAGCAGACTGTGCCACCACAACAGCCTTCTCCATACTCTAATGGGTTAACTTCAAATACAATGGCACCGTATGATCAACCCTCTGACATAAACGCCACAGGTTCATGGAATAGTCAATTTGCTCATGGAATGCTTCCTCCACAGCTTCCTCCACAACTTCCTCCACAGCAACCACCAAATTACGGTCAAGGTCAAGATCAGAGTGGTGATCTCCCACCACCACCCTGGGAAACTCAACCTGCAGAAAGTGATCAATTCCAGCCTGGGCAACCTCGTGGGCTAGCAATGCCATCAGGGCAAATTGGAGGCACTCAATCCCAACCTGTTCAAGTTCAGCCCGGGCAAGTTGCACCATTACAACCAATGCTGACCGGGCAACCCACAGGAATGCAGTTTCAGCAAGGGTTTGGGGATCAGCTTGGGGCTCAACAAACACAACCCTTGCACACACAATATGGTGGAATGTATCCTACAATGCA AGGTAACCAATCAGCTGGCATGTATCCCCA GCAGATGGCTGGAGATTTCTACCA GCAACAGATGTATGGTGGTC AGATGGCTGGTTATGGATACGGTCAGCAGTCTGGAGGATACTATGCTCCAAACGCTGCGTATGGGTATGGCGGT GCAAACGAGCTTTCTCAGGGAATGAATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACACTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTACATAAGT                                                                                                                                                                                                                                                                       ]
[+] EMBL AK101738             [                        TTCCCTTCCCTTCCTCTCGCCGAACCAACGCGGAAGAAGGAGCTCGCCCGCCGGCTAGGGTTTGCCGCACACCCGCCGCCGAGCAGCTAGCACCGGAGTGTTGGGAGGGGAGGCTCGCCCGCCGCCGCCGCCATGCCGCAGTCGGTGCTCGTCGACCGCGCGACGAGCGAGTCGCTCATCGGGCCCGACTGGTCCCTCAACCTCGAGATCTGCGACATCCTCAACCACGACCCCTCCCAAGCCAAAGATGTAGTGAAGTCTATCAAGAAACGCATTGGGCACAAGAACTCAAAGATCCAGCTTCTCGCACTAACATTGCTGGAGACACTGATTAAAAATTGTGGAGACTTTGTTCATATGCACGTTGCTGAGAGGGATATACTCCATGAAATGGTGAAGATAGCTAAGAAAAAGCCTGATTATCATGTAAAAGAGAAGATACTAATTCTGATAGACACTTGGCAAGAAGCTTTTGGTGGTTCCCGTGCAAGATATCCGCAATATTATGTAGCATATCAAGAGCTCCTGCGCGCTGGAGCTGTATTTCCTCAAAGACCAGACAGCTCTGTGCCAATCTATACTCCTCCACAGACTCAACCTCTACGGAATCTTCCTCCAGCTCTGCGTAATACTGAGCGTCAACAAGAAGCACCTGAATCTTCTTCAACACCAGAAGTACCTACACTGAGTTTGACAGAAATCCAGAATGCACGTGGTGTCATGGATGTTCTTTCAGAGATGTTGAATGCTATTGATCCTGGCAACAGAGAGGGTCTAAGACAGGAGGTTATTGTGGACCTTGTGGATCAATGTCGTTCTTACAAGCAGAGGGTGGTACAGCTTGTCAACTCAACCACGGACGAGGAGCTGCTAAGCCAGGGTCTTTCATTGAATGATGATTTACAGCGTGTTCTTGCAAAACACGATGCAATTGCTGCAGGCATAGCAGTTCGTGTAGAAAAACCAAAATCAGTCCAGGCCCGAGGGGACAAGTCTCCATCAATCAAACCAGAAGGGGCAAAACAGCCAGATCAGAGGTCTTCTGAAGCTGCCAGTACCGTGACTCCATTTGAGCAATTAGCGCTTCCAGCACCTGCATCATCCAGCAGTTCCAAACCTCCTGTAGAACCAGCTGTTGGCCCTAGTATTGACCTACTTAGTGGTGATGACTACTTCAAGCCAGAACCTGTTAATTCCCAGGCCCTTGTTTCTGTAGGCAATCCACCTGCTGCTTCAGCCAACAATACCTTGGACCTGGTAGACATGTTTGCACAAAGCAATGTTGGCAACAACCCGAACCCTGCTGTCACCTCTTCTATGTTGAATTCAAATCCTAGTCTCTCTGAGCCACAGCTGTATCCCTCACAGCAGACTGTGCCACCACAACAGCCTTCTCCATACTCTAATGGGTTAACTTCAAATACAATGGCACCGTATGATCAACCCTCTGACATAAACGCCACAGGTTCATGGAATAGTCAATTTGCTCATGGAATGCTTCCTCCACAGCTTCCTCCACAACTTCCTCCACAGCAACCACCAAATTACGGTCAAGGTCAAGATCAGAGTGGTGATCTCCCACCACCACCCTGGGAAACTCAACCTGCAGAAAGTGATCAATTCCAGCCTGGGCAACCTCGTGGGCTAGCAATGCCATCAGGGCAAATTGGAGGCATTCAATCCCAACCTGTTCAAGTTCAGCCCGGGCAAGTTGCACCATTACAACCAATGCTGACCGGGCAACCCACAGGAATGCAGTTTCAGCAAGGGTTTGGGGATCAGCTTGGGGCTCAACAAACACAACCCTTG  CACACAATATGGTGGAATGTATCCTACAATGCA AGGTAACCAATCAGCTGGCATGTATCCCCA GCAGATGGCTGGAGATTTCTACCA GCAACAGATGTATGGTGGTC AGATGGCTGGTTATGGATACGGTCAGCAGTCTGGAGGATACTATGCTCCAAACGCTGCGTATGGGTATGGCGGT GCAAACGAGCTTTCTCAGGGAATGAATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACACTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAGTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCAATTATAGTGTGTTTGCTTCTTGCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAGAAAAAACCATTGAACATTCTTTAATGTTTCCTGTAAAGAATTGATATCGTCAAGTATTATACTGGTAGCTACAATCT]
[+] EMBL CB627902             [                                                    CGCGGAAGAAGGAGCTCGCCCGCCGGCTAGGGTTTGCCGCACACCCGCCGCCGAGCAGCTAGCACCGGAGTGTTGGGAGGGGAGGCTCGCCCGCCGCCGCCGCCATGCCGCAGTCGGTGCTCGTCGACCGCGCGACGAGCGAGTCGCTCATCGGGCCCGACTGGTCCCTCAACCTCGAGATCTGCGACATCCTCAACCACGACCCCTCCCAAGCCAAAGATGTAGTGAAGTCTATCAAGAAACGCATTGGGCACAAGAACTCAAAGATCCAGCTTCTCGCACTAACATTGCTGGAGACACTGATTAAAAATTGTGGAGACTTTGTTCATATGCACGTTGCTGAGAGGGATATACTCCATGAAATGGTGAAGATAGCTAAGAAAAAGCCTGATTATCATGTAAAAGAGAAGATACTAATTCTGATAGACACTTGGCAAGAAGCTTTTGGTGGTTCCCGTGCAAGATATCCGCAATATTATGTAGCATATCAAGAGCTCCTGCGCGCTGGAGCTGTATTTCCTCAAAGACCAGACAGCTCTGTGCCAATCTATACTCCTCCACAGACTCAACCTCTACGGAATCTTCCTCCAGCTCTGCGTAATACTGAGCGTCAACAAGAAGCACCTGAATCTTCTTCAACACCAGAAGTACCTACACTGAGTTTGACAGAAATCCAGAATGCACGTGGTGTCATGGATGTTCTTTCAGAGATGTTGAATGCTATTGATCCTGGCAACAGAGAGGGTCTAAGACAGGAGGTTATTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB635568             [                                                                                                                                                            ATGCCGCAGTCGGTGCTCGTCGACCGCGCGACGAGCGAGTCGCTCATCGGGCCCGACTGGTCCCTCAACCTCGAGATCTGCGACATCCTCAACCACGACCCCTCCCAAGCCAAAGATGTAGTGAAGTCTATCAAGAAACGCATTGGGCACAAGAACTCAAAGATCCAGCTTCTCGCACTAACATTGCTGGAGACACTGATTAAAAATTGTGGAGACTTTGTTCATATGCACGTTGCTGAGAGGGATATACTCCATGAAATGGTGAAGATAGCTAAGAAAAAGCCTGATTATCATGTAAAAGAGAAGATACTAATTCTGATAGACACTTGGCAAGAAGCTTTTGGTGGTTCCCGTGCAAGATATCCGCAATATTATGTAGCATATCAAGAGCTCCTGCGCGCTGGAGCTGTATTTCCTCAAAGACCAGACAGCTCTGTGCCAATCTATACTCCTCCACAGACTCAACCTCTACGGAATCTTCCTCCAGCTCTGCGTAATACTGAGCGTCAACAAGAAGCACCTGAATCTTCTTCAACACCAGAAGTACCTACACTGAGTTTGACAGAAATCCAGAATGCACGTGGTGTCATGGATGTTCTTTCAGAGATGTTGAATGCTATTGATCCTGGCAACAGAGAGGGTCTAAGACAGGAGGTTATTGTGGACCTTGTGGATCAATGTCGTTCTTACAAGCAGAGGGTGGTACAGCTTGTCAACTCAACCACGGACGAGGAGCTGCTAAGCCAGGGTCTTTCATTGAATGATGATTTACAGCGTGTTCTTGCAACACACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB627903             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AACCTGCAGAAAGTGATCAATTCCAGCCTGGGCAACCTCGTGGGCTAGCAATGCCATCAGGGCAAATTGGAGGCATTCAATCCCAACCTGTTCAAGTTCAGCCCGGGCAAGTTGCACCATCACAACCAATGCTGACCGGGCAACCCACAGGAATGCAGTTTCAGCAAGGGTTTGGGGATCAGCTTGGGGCTCAACAAACACAACCCTTGCACACACAATATGGTGGAATGTATCCTACAATGCA AGGTAACCAATCAGCTGGCATGTATCCCCA GCAGATGGCTGGAGATTTCTACCA GCAACAGATGTATGGTGGTC AGATGGCTGGTTATGGATACGGTCAGCAGTCTGGAGGATACTATGCTCCAAACGCTGCGTATGGGTATGGCGGT GCAAACGAGCTTTCTCAGGGAATGAATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACGCTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTACATAAGTT                                                                                                                                                                                                                                                                      ]
[-] EMBL CB635569             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAGGGCAAATTGGAGGCATTCAATCCCAACCTGTTCAAGTTCAGCCCGGGCAAGTTGCACCATCACAACCAATGCTGACCGGGCAACCCACAGGAATGCAGTTTCAGCAAGGGTTTGGGGATCAGCTTGGGGCTCAACAAACACAACCCTTGCACACACAATATGGTGGAATGTATCCTACAATGCA AGGTAACCAATCAGCTGGCATGTATCCCCA GCAGATGGCTGGAGATTTCTACCA GCAACAGATGTATGGTGGTC AGATGGCTGGTTATGGATACGGTCAGCAGTCTGGAGGATACTATGCTCCAAACGCTGCGTATGGGTATGGCGGT GCAAACGAGCTTTCTCAGGGAATGAATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACGCTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAGTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCAATTATAGTGTGTTTGCTTCTTGCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAG AAAAACCATTGA                                                                ]
[+] EMBL BI805069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCAA GGTTTGGGGATCAGCTTGGGGCTCAAC AACACAACCCTTGCACACACAATATGGTGGAATGTATCCTACAATGCACAGGTAACCAATCAGCTGGCATGTATCCCCACGCAGATGGCTGGAGATTTCTACCACGCAACAGATGTATGGTGGTC AGATGGCTGGTTATGGATACGGTCA CAGTCTGGAGGATACTATGCTCC AACGCTGCGTATGGGTAT GCGGTCGCAAACGAGCTTTCTCAGGGAATGAATGGCCTT CAGTGCAAGATAACCGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCC ATGAGGCCATCCAGACCCGAGGATGCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAAC AAGCCTAGC AAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACACTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTAAAAAAaaa                                                                                                                                                                                                                                                                      ]
[+] EMBL BI804137             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCA CCAACAGATGTAT GT GTCAAGATGCCTGGTTATGGATACGGTCAGCAGTCTGGAGGATACTATGCTCCAAACGCTGCGTATGGGTAT GCGGT GCAAACGAGCTTTCTCAGGGAATGAATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCC ATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAAC AAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACGCTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAGTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGC ATTATAGTGTGTTTGCTTCTTGCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAG AAAAACCATTGAACATTCTTTAAaaaaaa                                               ]




>consensus_11557#0
GAGAATTAGAATTTTCCTCCTCCCTTCCCTTCCCTTCCTCTCGCCGAACCAACGCGGAAG
AAGGAGCTCGCCCGCCGGCTAGGGTTTGCCGCACACCCGCCGCCGAGCAGCTAGCACCGG
AGTGTTGGGAGGGGAGGCTCGCCCGCCGCCGCCGCCATGCCGCAGTCGGTGCTCGTCGAC
CGCGCGACGAGCGAGTCGCTCATCGGGCCCGACTGGTCCCTCAACCTCGAGATCTGCGAC
ATCCTCAACCACGACCCCTCCCAAGCCAAAGATGTAGTGAAGTCTATCAAGAAACGCATT
GGGCACAAGAACTCAAAGATCCAGCTTCTCGCACTAACATTGCTGGAGACACTGATTAAA
AATTGTGGAGACTTTGTTCATATGCACGTTGCTGAGAGGGATATACTCCATGAAATGGTG
AAGATAGCTAAGAAAAAGCCTGATTATCATGTAAAAGAGAAGATACTAATTCTGATAGAC
ACTTGGCAAGAAGCTTTTGGTGGTTCCCGTGCAAGATATCCGCAATATTATGTAGCATAT
CAAGAGCTCCTGCGCGCTGGAGCTGTATTTCCTCAAAGACCAGACAGCTCTGTGCCAATC
TATACTCCTCCACAGACTCAACCTCTACGGAATCTTCCTCCAGCTCTGCGTAATACTGAG
CGTCAACAAGAAGCACCTGAATCTTCTTCAACACCAGAAGTACCTACACTGAGTTTGACA
GAAATCCAGAATGCACGTGGTGTCATGGATGTTCTTTCAGAGATGTTGAATGCTATTGAT
CCTGGCAACAGAGAGGGTCTAAGACAGGAGGTTATTGTGGACCTTGTGGATCAATGTCGT
TCTTACAAGCAGAGGGTGGTACAGCTTGTCAACTCAACCACGGACGAGGAGCTGCTAAGC
CAGGGTCTTTCATTGAATGATGATTTACAGCGTGTTCTTGCAAAACACGATGCAATTGCT
GCAGGCATAGCAGTTCGTGTAGAAAAACCAAAATCAGTCCAGGCCCGAGGGGACAAGTCT
CCATCAATCAAACCAGAAGGGGCAAAACAGCCAGATCAGAGGTCTTCTGAAGCTGCCAGT
ACCGTGACTCCATTTGAGCAATTAGCGCTTCCAGCACCTGCATCATCCAGCAGTTCCAAA
CCTCCTGTAGAACCAGCTGTTGGCCCTAGTATTGACCTACTTAGTGGTGATGACTACTTC
AAGCCAGAACCTGTTAATTCCCAGGCCCTTGTTTCTGTAGGCAATCCACCTGCTGCTTCA
GCCAACAATACCTTGGACCTGGTAGACATGTTTGCACAAAGCAATGTTGGCAACAACCCG
AACCCTGCTGTCACCTCTTCTATGTTGAATTCAAATCCTAGTCTCTCTGAGCCACAGCTG
TATCCCTCACAGCAGACTGTGCCACCACAACAGCCTTCTCCATACTCTAATGGGTTAACT
TCAAATACAATGGCACCGTATGATCAACCCTCTGACATAAACGCCACAGGTTCATGGAAT
AGTCAATTTGCTCATGGAATGCTTCCTCCACAGCTTCCTCCACAACTTCCTCCACAGCAA
CCACCAAATTACGGTCAAGGTCAAGATCAGAGTGGTGATCTCCCACCACCACCCTGGGAA
ACTCAACCTGCAGAAAGTGATCAATTCCAGCCTGGGCAACCTCGTGGGCTAGCAATGCCA
TCAGGGCAAATTGGAGGCATTCAATCCCAACCTGTTCAAGTTCAGCCCGGGCAAGTTGCA
CCATTACAACCAATGCTGACCGGGCAACCCACAGGAATGCAGTTTCAGCAAGGGTTTGGG
GATCAGCTTGGGGCTCAACAAACACAACCCTTGCACACACAATATGGTGGAATGTATCCT
ACAATGCAAGGTAACCAATCAGCTGGCATGTATCCCCAGCAGATGGCTGGAGATTTCTAC
CAGCAACAGATGTATGGTGGTCAGATGGCTGGTTATGGATACGGTCAGCAGTCTGGAGGA
TACTATGCTCCAAACGCTGCGTATGGGTATGGCGGTGCAAACGAGCTTTCTCAGGGAATG
AATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAG
CAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCT
AAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGAT
GCTTATTAACACTTGTGGCCGCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAA
TTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAG
TGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCAATTATAGTGTGTTTGCTTCTTG
CAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAGAA
AAACCATTGAACATTCTTTAATGTTTCCTGTAAAGAATTGATATCGTCAAGTATTATACT
GGTAGCTACAATCT

consensusID : consensus_11557#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 499
fasta sequence

                              [TCCCAAAACGCTGCGTATGGTTATGCCGGTGCAAACGAGCTTTCTCAGGGAATGAATGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACGCTTGTGGCCGCCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAGTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCATTATAGTGTGTTTGCTTCTTGCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAGNAAAACCNTTGAACATTCAAAAAAAAAA]

[+] EMBL BM421166             [TCCCAAAACGCTGCGTATGGTTATGCCGGTGCAAACGAGCTTTCTCAGGGAATGAATGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATTAACGCTTGTGGCCGCCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAGTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCATTATAGTGTGTTTGCTTCTTGCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAGNAAAACCNTTGAACATTCAAAAAAAAAA]




>consensus_11557#1
TCCCAAAACGCTGCGTATGGTTATGCCGGTGCAAACGAGCTTTCTCAGGGAATGAATGCC
TTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAGCAGCCAA
TGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCTAAAACAA
AGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGATGCTTATT
AACGCTTGTGGCCGCCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGAATTATTT
TTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGAGTGCGGT
TCAGTAAATTTTTCTCTGTCAACTTGCAAGCATTATAGTGTGTTTGCTTCTTGCAAGCTC
TTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAGNAAAACCNT
TGAACATTCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11557#0      GAGAATTAGAATTTTCCTCCTCCCTTCCCTTCCCTTCCTCTCGCCGAACCAACGCGGAAG 60
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      AAGGAGCTCGCCCGCCGGCTAGGGTTTGCCGCACACCCGCCGCCGAGCAGCTAGCACCGG 120
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      AGTGTTGGGAGGGGAGGCTCGCCCGCCGCCGCCGCCATGCCGCAGTCGGTGCTCGTCGAC 180
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CGCGCGACGAGCGAGTCGCTCATCGGGCCCGACTGGTCCCTCAACCTCGAGATCTGCGAC 240
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      ATCCTCAACCACGACCCCTCCCAAGCCAAAGATGTAGTGAAGTCTATCAAGAAACGCATT 300
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      GGGCACAAGAACTCAAAGATCCAGCTTCTCGCACTAACATTGCTGGAGACACTGATTAAA 360
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      AATTGTGGAGACTTTGTTCATATGCACGTTGCTGAGAGGGATATACTCCATGAAATGGTG 420
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      AAGATAGCTAAGAAAAAGCCTGATTATCATGTAAAAGAGAAGATACTAATTCTGATAGAC 480
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      ACTTGGCAAGAAGCTTTTGGTGGTTCCCGTGCAAGATATCCGCAATATTATGTAGCATAT 540
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CAAGAGCTCCTGCGCGCTGGAGCTGTATTTCCTCAAAGACCAGACAGCTCTGTGCCAATC 600
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      TATACTCCTCCACAGACTCAACCTCTACGGAATCTTCCTCCAGCTCTGCGTAATACTGAG 660
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CGTCAACAAGAAGCACCTGAATCTTCTTCAACACCAGAAGTACCTACACTGAGTTTGACA 720
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      GAAATCCAGAATGCACGTGGTGTCATGGATGTTCTTTCAGAGATGTTGAATGCTATTGAT 780
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CCTGGCAACAGAGAGGGTCTAAGACAGGAGGTTATTGTGGACCTTGTGGATCAATGTCGT 840
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      TCTTACAAGCAGAGGGTGGTACAGCTTGTCAACTCAACCACGGACGAGGAGCTGCTAAGC 900
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CAGGGTCTTTCATTGAATGATGATTTACAGCGTGTTCTTGCAAAACACGATGCAATTGCT 960
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      GCAGGCATAGCAGTTCGTGTAGAAAAACCAAAATCAGTCCAGGCCCGAGGGGACAAGTCT 1020
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CCATCAATCAAACCAGAAGGGGCAAAACAGCCAGATCAGAGGTCTTCTGAAGCTGCCAGT 1080
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      ACCGTGACTCCATTTGAGCAATTAGCGCTTCCAGCACCTGCATCATCCAGCAGTTCCAAA 1140
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CCTCCTGTAGAACCAGCTGTTGGCCCTAGTATTGACCTACTTAGTGGTGATGACTACTTC 1200
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      AAGCCAGAACCTGTTAATTCCCAGGCCCTTGTTTCTGTAGGCAATCCACCTGCTGCTTCA 1260
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      GCCAACAATACCTTGGACCTGGTAGACATGTTTGCACAAAGCAATGTTGGCAACAACCCG 1320
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      AACCCTGCTGTCACCTCTTCTATGTTGAATTCAAATCCTAGTCTCTCTGAGCCACAGCTG 1380
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      TATCCCTCACAGCAGACTGTGCCACCACAACAGCCTTCTCCATACTCTAATGGGTTAACT 1440
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      TCAAATACAATGGCACCGTATGATCAACCCTCTGACATAAACGCCACAGGTTCATGGAAT 1500
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      AGTCAATTTGCTCATGGAATGCTTCCTCCACAGCTTCCTCCACAACTTCCTCCACAGCAA 1560
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CCACCAAATTACGGTCAAGGTCAAGATCAGAGTGGTGATCTCCCACCACCACCCTGGGAA 1620
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      ACTCAACCTGCAGAAAGTGATCAATTCCAGCCTGGGCAACCTCGTGGGCTAGCAATGCCA 1680
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      TCAGGGCAAATTGGAGGCATTCAATCCCAACCTGTTCAAGTTCAGCCCGGGCAAGTTGCA 1740
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CCATTACAACCAATGCTGACCGGGCAACCCACAGGAATGCAGTTTCAGCAAGGGTTTGGG 1800
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      GATCAGCTTGGGGCTCAACAAACACAACCCTTGCACACACAATATGGTGGAATGTATCCT 1860
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      ACAATGCAAGGTAACCAATCAGCTGGCATGTATCCCCAGCAGATGGCTGGAGATTTCTAC 1920
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      CAGCAACAGATGTATGGTGGTCAGATGGCTGGTTATGGATACGGTCAGCAGTCTGGAGGA 1980
consensus_11557#1      ------------------------------------------------------------
                                                                                   

consensus_11557#0      TACTATGCTCCAAACGCTGCGTATGGGTATGGCGGTGCAAACGAGCTTTCTCAGGGAATG 2040
consensus_11557#1      ------TCCCAAAACGCTGCGTATGGTTATGCCGGTGCAAACGAGCTTTCTCAGGGAATG 54
                              * * *************** **** ****************************

consensus_11557#0      AATGGCCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAG 2100
consensus_11557#1      AATG-CCTTGCAGTGCAAGATAACAGTTTGTATGGAACTTCTGCATCCTCTTCCTTCCAG 113
                       **** *******************************************************

consensus_11557#0      CAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCT 2160
consensus_11557#1      CAGCCAATGAGGCCATCCAGACCCGAGGATTCCCTCTTTGGTGATCTTGTTAGCATTGCT 173
                       ************************************************************

consensus_11557#0      AAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGAT 2220
consensus_11557#1      AAAACAAAGCCTAGCAAAACTGCAGCTAATAAGGCTGGTGGCTTGTAAAGATGAGTGGAT 233
                       ************************************************************

consensus_11557#0      GCTTATTAACACTTGTGGCCGC-GGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGA 2279
consensus_11557#1      GCTTATTAACGCTTGTGGCCGCCGGAGATAGCTTTTCCTCATAGTACATAAGTTCTTTGA 293
                       ********** *********** *************************************

consensus_11557#0      ATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGA 2339
consensus_11557#1      ATTATTTTTCTCTATTGGAAAGTAGTAGGTGAGCGTTATAGATTCTGAAATTCATAGCGA 353
                       ************************************************************

consensus_11557#0      GTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCAATTATAGTGTGTTTGCTTCTT 2399
consensus_11557#1      GTGCGGTTCAGTAAATTTTTCTCTGTCAACTTGCAAGCA-TTATAGTGTGTTTGCTTCTT 412
                       *************************************** ********************

consensus_11557#0      GCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAGA 2459
consensus_11557#1      GCAAGCTCTTAATTTCCTGCGCCATCAGGAGTTTTCTGTAGTCTGTAAACCTTGGTAAGN 472
                       *********************************************************** 

consensus_11557#0      AAAACCATTGAACATTCTTTAATGTTTCCTGTAAAGAATTGATATCGTCAAGTATTATAC 2519
consensus_11557#1      AAAACCNTTGAACATTCAAAAAAAAAA--------------------------------- 499
                       ****** **********   **                                      

consensus_11557#0      TGGTAGCTACAATCT 2534
consensus_11557#1      ---------------