These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11561#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3569 fasta sequence [GGTGGTTCTCTTCTCTTCTCTTATCCCCCGGAGACGCCGCTGCGGCGCCACCCCCTCCTCGCCGTGGACCTCGGGGTGGGAGCGTGGCGGCCTGCACAGCCGGAGCTCAGCTCGCCCGCCGCGTCGGATGGACGCCGCCTCCTGCTGCCGCGTCTTCTCGACGCAGAGATGCCGCTTCCCGCTGCGGAGGCTGGCGCCGCCGATTTCGCGGCGGCCGTTCGGCACGGAGTCGACGAGTGAGCTGTTCGCCGCGTCGACCTCGAAGCGGCGCTCCCGGGGGCCCGTCATGGCGGCGAAGAAGGCCGCCGAGGGTGCTAAACAAGAAGAGGGGAAATACAAACACACGGTGGATCTACCAAAGACAACTTTTGGCTTGAGAGCTAATTCTGTTGTGCGGGAGCCGGAGCTCCAGAAGTTGTGGGAGGAGAACCAGGTGCTCAAGAGGGTATCAGAAAGGAACACTGGGGCTACATTTGTTCTCCATGATGGTCCTCCTTATGCTAATGGTGATCTTCATATGGGCCATGCACTGAATAAAATCCTCAAAGATATTATAAACCGTTACGAGCTGCTTCAGAATCACAAAGTTTCTTTTATTCCTGGATGGGATTGCCATGGCCTTCCAATCGAATTAAAAGTTCTAAAGTCACTGGACAAGGAAACATTGAATGCTCTGACACCTATAAAATTAAGGCAGAAGGCTGCAAAATTTGCTAAAGCGACGGTTACTACACAAATGAATTCTTTCAAGCGGTTTGGTGTATGGGCAGATTGGGACAACCCTTATCTAACTCTGTCACCAGAGTATGAAGCTGCTCAGCTAGAAGTTTTTGGCCAAATGGTTATGAAAGGATATATCTACCGCGGGCGAAAACCTGTTCATTGGAGTCCGTCATCACGTACAGCTTTAGCAGAAGCTGAGTTGGAGTATTCAGAAAATCATATTTCCAAAAGCATGTATGCTGCATTCAAGATCACTAATCTGTCTAAGCCTGGGTTGCTGGAGGAATTTCTCCCTAATTTATGCCTAGCCATATGGACCACTACTCCATGGACGATTCCTGCTAATGCTGCTGTTGCTGTGAACCCTGAGCTCACTTATGTAGTAGTTGAGCTGCAATCTGTACTAGAAAGTGAATCAACATCTGGTGGAAATCAACGAAAGCTTGGGAGTATTTTGAGCCCTGGGAGTCAGAAACCATTTATCATCGTGGCTGCTGATCTTGTCTCAGCTCTAGAGTCCAAGTGGGGTACGAAGCTTATAATCCAGAAATCATTTCCTGGGTCAGCCTTGGAGCACTGCAGGTATATTCATCCTGTGAATGGCAATGAATGTTCTGTTGTTCTTGGAGGAGATTACATAACAACTGAATCTGGCACTGGCCTTGTTCATACTGCCCCTGGCCATGGTCAGGAAGACTACATAACAGGTTTGAAATATGGGCTTCCTATTGTGTCTCCTGTGGATGATGAAGGAAACTTCACTGCTGAAGCTGGACAATTCAGTGGTTTATCTGTTCTGGGAGCTGGTAATGCCGCGGTTGTGAATTATCTGGATGAACAGTGTTCTCTCATTTTAGAGGAGCCTTACAAACACAAGTACCCCTATGACTGGCGGTCTAAAGAACCAACAATATTCCGAGCAACTGAACAATGGTTTGCCTCGGTGGGTGGTTTCCGTAATGCTGCAATGGATGCAATTAGGCGAGTATCTTGGATTCCTTCTCAGGCTGAAAATAGGATTGTGGCCATGACTTCAAGCCGTTCTGACTGGTGTATTTCGCGGCAGAGAACTTGGGGGGTTCCTATTCCGGTCTTCTATCATGTAGACTCGAATGAACCTCTTATAACTGAAGAAACTATTGAACACATCAAGGGTATAGTGTCAAAGAAAGGGAGTGATGCCTGGTGGTATATGACAATTGAGGAACTTCTTCCTGAAAAATATCGTGATAAAGCATCTGAGTATCGCAAGGGAACTGATACAATGGACGTTTGGTTTGACTCTGGCTCCTCATGGGCTGCTGTTTTGGCACAAAGAGATGGCCTTAATTTTCCAGCGGATATATACCTTGAAGGTTCAGACCAACACCGTGGATGGTTTCAGAGCTCATTGTTAACCAGCATTGCTACTACAGGAAAGGCTCCATATTCTAGTGTTATAACCCATGGTTTTGTACTGGACGAAAAGGGTTTCAAGATGAGCAAATCTCTTGGTAATGTGGTTGATCCTGGGAAAGTAATTGTTGGTGGTAAAAATTCAAAGCAAGAACCTGGCTATGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGTTGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCGATTCCTATTGTCGAATCTCCATGATTGGGAACCAGAAAATTCTGTGCGCTACAGTGATCTACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGATAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGTTGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGTTAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAGAGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCAACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAAGAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATCACATCTGAGGTGGAGATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTACACTGGAACTTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGATGGCGAAAAATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCATCCTACTCTTTGTGCCCGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCGGCTGTCAGCTGAGGCTGCTCGAGAGTGACAAGGACCACTATCAGCTTCATTTGAAGATTATAGGTGGAATTAATTGTTTTTGTTCTACAATTTTGTTCCCCTCTGACCGATGATGCTAGAGGAAGGGGAAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTTGCGTACAATAAGTTGTACCTTGATTTTTGACCATTGCTTGGCTTCCTGGAGCTGTAATTGTATATTTGTATTGCAGAACTCACACGGATTAAAGATGGAAACA] [+] EMBL AK065948 [GGTGGTTCTCTTCTCTTCTCTTATCCCCCGGAGACGCCGCTGCGGCGCCACCCCCTCCTCGCCGTGGACCTCGGGGTGGGAGCGTGGCGGCCTGCACAGCCGGAGCTCAGCTCGCCCGCCGCGTCGGATGGACGCCGCCTCCTGCTGCCGCGTCTTCTCGACGCAGAGATGCCGCTTCCCGCTGCGGAGGCTGGCGCCGCCGATTTCGCGGCGGCCGTTCGGCACGGAGTCGACGAGTGAGCTGTTCGCCGCGTCGACCTCGAAGCGGCGCTCCCGGGGGCCCGTCATGGCGGCGAAGAAGGCCGCCGAGGGTGCTAAACAAGAAGAGGGGAAATACAAACACACGGTGGATCTACCAAAGACAACTTTTGGCTTGAGAGCTAATTCTGTTGTGCGGGAGCCGGAGCTCCAGAAGTTGTGGGAGGAGAACCAGGTGCTCAAGAGGGTATCAGAAAGGAACACTGGGGCTACATTTGTTCTCCATGATGGTCCTCCTTATGCTAATGGTGATCTTCATATGGGCCATGCACTGAATAAAATCCTCAAAGATATTATAAACCGTTACGAGCTGCTTCAGAATCACAAAGTTTCTTTTATTCCTGGATGGGATTGCCATGGCCTTCCAATCGAATTAAAAGTTCTAAAGTCACTGGACAAGGAAACATTGAATGCTCTGACACCTATAAAATTAAGGCAGAAGGCTGCAAAATTTGCTAAAGCGACGGTTACTACACAAATGAATTCTTTCAAGCGGTTTGGTGTATGGGCAGATTGGGACAACCCTTATCTAACTCTGTCACCAGAGTATGAAGCTGCTCAGCTAGAAGTTTTCGGCCAAATGGTTATGAAAGGATATATCTACCGCGGGCGAAAACCTGTTCATTGGAGTCCGTCATCACGTACAGCTTTAGCAGAAGCTGAGTTGGAGTATTCAGAAAATCATATTTCCAAAAGCATGTATGCTGCATTCAAGATCACCAATCTGTCTAAGCCTGGGTTGCTGGAGGAATTTCTCCCTAATTTATGCCTAGCCATATGGACCACTACTCCATGGACGATTCCTGCTAATGCTGCTGTTGCTGTGAACCCTGAGCTCACTTATGTAGTAGTTGAGCTGCAATCTGTACTAGAAAGTGAATCAACATCTGGTGGAAATCAACGAAAGCTTGGGAGTATTTTGAGCCCTGGGAGTCAGAAACCATTTATCATCGTGGCTGCTGATCTTGTCTCAGCTCTAGAGTCCAAGTGGGGTACAAAGCTTATAATCCAGAAATCATTTCCTGGGTCAGCCTTGGAGCACTGCAGGTATATTCATCCTGTGAATGGCAATGAATGTTCTGTTGTTCTTGGAGGAGATTACATAACAACTGAATCTGGCACTGGCCTTGTTCATACTGCCCCTGGCCATGGTCAGGAAGACTACATAACAGGTTTGAAATATGGGCTTCCTATTGTGTCTCCTGTGGATGATGAAGGAAACTTCACTGCTGAAGCTGGACAATTCAGTGGTTTATCTGTTCTGGGAGCTGGTAATGCCGCGGTTGTGAATTATCTGGATGAACAGTGTTCTCTCATTTTAGAGGAGCCTTACAAACACAAGTACCCCTATGACTGGCGGTCTAAAGAACCAACAATATTCCGAGCAACTGAACAATGGTTTGCCTCGGTGGGTGGTTTCCGTAATGCTGCAATGGATGCAATTAGGCGAGTATCTTGGATTCCTTCTCAGGCTGAAAATAGGATTGTGGCCATGACTTCAAGCCGTTCTGACTGGTGTATTTCGCGGCAGAGAACTTGGGGGGTTCCTATTCCGGTCTTCTATCATGTAGACTCGAATGAACCTCTTATAACTGAAGAAACTATTGAACACATCAAGGGTATAGTGTCAAAGAAAGGGAGTGATGCCTGGTGGTATATGACAATTGAGGAACTTCTTCCTGAAAAATATCGTGATAAAGCATCTGAGTATCGCAAGGGAACTGATACAATGGACGTTTGGTTTGACTCTGGCTCCTCATGGGCTGCTGTTTTGGCACAAAGAGATGGCCTTAATTTTCCAGCGGATATATACCTTGAAGGTTCAGACCAACACCGTGGATGGTTTCAGAGCTCATTGTTAACCAGCATTGCTACTACAGGAAAGGCTCCATATTCTAGTGTTATAACCCATGGTTTTGTACTGGACGAAAAGGGTTTCAAGATGAGCAAATCTCTTGGTAATGTGGTTGATCCTGGGAAAGTAATTGTTGGTGGTAAAAATTCAAAGCAAGAACCTGGCTATGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGTTGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCGATTCCTATTGTCGAATCTCCATGATTGGGAACCAGAAAATTCTGTGCGCTACAGTGATCTACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGATAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGTTGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGTTAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAGAGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCAACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAAGAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATCACATCTGGGGTGGAGATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTACACTGGAACTTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGATGGCGAAAAATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCATCCTACTCTTTGTGCCCGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCGGCTGTCAGCTGAGGCTGCTCGAGAGTGACAAGGACCACTATCAGCTTCATTTGAAGATTATAGGTGGAATTAATTGTTTTTGTTCTACAATTTTGTTCCCCTCTGACCGATGATGCTAGAGGAAGGGGAAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTTGCGTACAATAAGTTGTACCTTGATTTTTGACCATTGCTTGGCTTCCTGGAGCTGTAATTGTATATTTGTATTGCAGAACTCACACGGATTAAAGATGGAA ] [+] EMBL CB634705 [ ATGCTCTCACACCTATAAAATTAAGGCAGAAGGCTGCAAAATTTGCTAAAGCGACGGTTACTACACAAATGAATTCTTTCAAGCGGTTTGGTGTATGGGCAGATTGGGACAACCCTTATCTAACTCTGTCACCAGAGTATGAAGCTGCTCAGCTAGAAGTTTTTGGCCAAATGGTTATGAAAGGATATATCTACCGCGGGCGAAAACCTGTTCATTGGAGTCCGTCATCACGTACAGCTTTAGCAGAAGCTGAGTTGGAGTATTCAGAAAATCATATTTCCAAAAGCATGTATGCTGCATTCAAGATCACTAATCTGTCTAAGCCTGGGTTGCTGGAGGAATTTCTCCCTAATTTATGCCTAGCCATATGGACCACTACTCCATGGACGATTCCTGCTAATGCTGCTGTTGCTGTGAACCCTGAGCTCACTTATGTAGTAGTTGAGCTGCAATCTGTACTAGAAAGTGAATCAACATCTGGTGGAAATCAACGAAAGCTTGGGAGTATTTTGAGCCCTGGGAGTCAGAAACCATTTATCATCGTGGCTGCTGATCTTGTCTCAGCTCTAGAGTCCAAGTGGGGTACGAAGCTTATAATCCAGAAATCATTTCCTGGGTCAGCCTTGGAGCACTGCAGGTATATTCATCCTGTGAATGGCAATGAATGTTCTGTTGTTCTTGGAGGAGATTACATAACAACTGAATCTGGCACTGGCCTTGTTCATACTGCCCCTGGCCATGGTCAGGAAGACTACATAACAGGTTTGAAATATGGGCTTCCT ] [+] EMBL CB634802 [ TAAAGCGACGGGTACTACACAAATGAATTCTTTCCCCCGGATTGGTGTATGGGCAGATTGGGACAACCCTTATCTAACTCTGTCACCAGAGTATGAAGCTGCTCAGCTAGAAGTTTTTGGCCAAATGGTTATGAAAGGATATATCTACCGCGGGCGAAAACCTGTTCATTGGAGTCCGTCATCACGTACAGCTTTAGCAGAAGCTGAGTTGGAGTATTCAGAAAATCATATTTCCAAAAGCATGTATGCTGCATTCAAGATCACTAATCTGTCTAAGCCTGGGTTGCTGGAGGAATTTCTCCCTAATTTATGCCTAGCCATATGGACCACTACTCCATGGACGATTCCTGCTAATGCTGATGTTGCTGTGAACCCTGAGCTCACTTATGTAGTAGTTGAGCTGCAATCTGTACTATAAAGTGAATCAAGATCTGGTGGAAATCAACGAAAGCTTGGGAGTATTTTGAGCCCTGGGAGTCAGAAACCATTTATCATCGTGGCTGCTGATCTTGTCTCAACTCTAGAGTCCAAGTGGGGTACGAAGCTTATAATCCAGAAATCATTTCCTGGGTCAGCCTTGGAGCACTGAAAGTATATTCATCCTGTGAATGGTAATGAATGTTCTGTTGGTCTTGGAGGAGATTAC ] [+] EMBL CB671784 [ ATGATGAAGGAAACTTCACTGCTGAAGCTGGACAATTCAGTGGTTTATCTGTTCTGGGAGCTGGTAATGCCGCGGTTGTGAATTATCTGGATGAACAGTGTTCTCTCATTTTAGAGGAGCCTTACAAACACAAGTACCCCTATGACTGGCGGTCTAAAGAACCAACAATATTCCGAGCAACTGAACAATGGTTTGCCTCGGTGGATGGTTTCCGTAATGCTGCAATGGATGCAATTAGGCGAGTATCTTGGATTCCTTCTCAGGCTGAAAATAGGATTGTGGCCATGACTTCAAGCCGTTCTGACTGGTGTATTTCGCGGCAGAGAACTTGGGGGGTTCCTATTCCGGTCTTCTATCATGTAGACTCGAATGAACCTCTTATAACTGAAGAAACTATTGAACACATCAAGGGTATAGTGTCAAAGAAAGGGAGTGATGCCTGGTGGTATATGACAATTGAGGAACTTCTTCCTGAAAAATATCGTGATAAAGCATCTGAGTATCGCAAGGGAACTGATACAATGGACGTTTGGTTTGACTCTGGCTCCTCATGGGCTGCTGTTTTGGCACAAAGAGATGGCCTTAATTTTCCAGCGGATATATACCTTGAAGGTTCAGACCAACACCGTGGATGGTTTCAGAGCTCATTGTTAACCAGCATTGCTACTACAGGAAAGGCTCCATATTCTAGTGTTATAACCCATGGTTTTGTACTGG ] [+] EMBL AK121954 [ CCATATTCTAGTGTTATAACCCATGGTTTTGTACTGGACGAAAAGGGTTTCAAGATGAGCAAATCTCTTGGTAATGTGGTTGATCCTGAGAAAGTAATTGTTGGTGGTAAAAATTCAAAGCAAGAACCTGGCTATGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGTTGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCGATTCCTATTGTCGAATCTCCATGATTGGAAACCAGAAAATTCTGTGCGCTACAGTGATCTACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGATAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGTTGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGTTAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAGAGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCAACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAAGAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATCACATCTGAGGTGGAGATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTACACTGGAACTTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGTCTCGCGCCGATGGCGAAAAATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCATCCTACTCTTTGTGCCCGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCGGCTGTCAGCTGAGGCTGCTCGAGAGTGACAAGGACCACTATCAGCTTCATTTGAAGATTATAGGTGGAATTAATTGTTTTTGTTCTACAATTTTGTTCCCCTCTGACCGATGATGCTAGAGGAAGGGGAAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTTGCGTACAATAAGTTGTACCTTGATTTTTGACCATTGCTTGGCTTCCTGGAGCTGTAATTGTATATTTGTATTGCAGAACTCACACGGATTAAAGATGGAA ] [-] EMBL CB659640 [ CCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCAACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAAGAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATCACATCTGAGGTGGAGATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTACACTGGAACTTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGATGGCGAAAAATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCATCCTACTCTTTGTGCCCGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCGGCTGTCAGCTGAGGCTGCTCGAGAGTGACAAGGACCACTATCAGCTTCATTTGAAGATTATAGGTGGAATTAATTGTTTTTGTTCTACAATTTTGTTCCCCTCTGACCGATGATGCTAGAGGAAGGGGAAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTTGCGTACAATAAGTTGTACCTTGATTTTTGACCATTGCTTGGCTTCGGGGAGCTGTAATTGTATATTTGTATTGCAGAAC ] [-] EMBL CB634706 [ TAATCTAAAATGGCCAGTTAAGAATGAAGAATGGCTCTCAGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATCACATCTGAGGTGGAGATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTACACTGGAACTTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGATGGCGAAAAATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCATCCTACTCTTTGTGCCCGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCGGCTGTCAGCTGAGGCTGCTCGAGAGTGACAAGGACCACTATCAGCTTCATTTGAAGATTATAGGTGGAATTAATTGTTTTTGTTCTACAATTTTGTTCCCCTCTGACCGATGATGCTAGAGGAAGGGGAAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTTGCGTACAATAAGTTGTACCTTGATTTTTGACCATTGCTTGGCTTCCTGGAGCTGTAATTGTATATTTGTATTGCAGAACTCACACGGATTAAAGATGGAAACA] [-] EMBL CB671785 [ AAATTTTGGAGAGTGCTCGACCAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTTTGCACCGCCTGTTTATCACATCTGAGGTGGAGATCCTTCCTTCCGTAAGCTCGGAAACTACATCTGGTGTATCCTCCACTGGAACTTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGATGGCGAAAAATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGCCCATCCTACTCTTTGTGCCCGGTGCCACGGTGTCATTGATTTGCCACCAGTTCCTGCTGCCGCGGCTGTCAGCTGAGGCTGCTCGAGAGTGACAAGGCCCACTATCAGCTTCATTTGAAGATTATAGGTGGAATTAATTGTTTTTGTTTTACAATTTTGTTCCCCTCTGCCCGATGATGCTAGAGGAAGGGGAAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTGGCGTACAATAAGTTGTCCCTTGATTTTTGCCCATTGCTTGGCTTCCTGGAGCTGTAATTGTATATTTGTATTGCAGAACTCCCCCGGATAAAGGATGGAAc ] consensusID : consensus_11561#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 821 fasta sequence [AGTTTTGCCTAATGAAATATCAATCAACCTTTTGTAGCAAGAACCTGGCTATGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGTTGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCGATTCCTATTGTCGAATCTCCATGATTGGAAACCAGAAAATTCTGTGCGCTACAGTGATCTACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGATAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGTTGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGTTAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAGAGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCAACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAAGAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTA] [+] EMBL CB659639 [AGTTTTGCCTAATGAAATATCAATCAACCTTTTGTAGCAAGAACCTGGCTATGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGTTGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCGATTCCTATTGTCGAATCTCCATGATTGGAAACCAGAAAATTCTGTGCGCTACAGTGATCTACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGATAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGTTGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGTTAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAGAGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCAACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAAGAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11561#0 GGTGGTTCTCTTCTCTTCTCTTATCCCCCGGAGACGCCGCTGCGGCGCCACCCCCTCCTC 60 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GCCGTGGACCTCGGGGTGGGAGCGTGGCGGCCTGCACAGCCGGAGCTCAGCTCGCCCGCC 120 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GCGTCGGATGGACGCCGCCTCCTGCTGCCGCGTCTTCTCGACGCAGAGATGCCGCTTCCC 180 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GCTGCGGAGGCTGGCGCCGCCGATTTCGCGGCGGCCGTTCGGCACGGAGTCGACGAGTGA 240 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GCTGTTCGCCGCGTCGACCTCGAAGCGGCGCTCCCGGGGGCCCGTCATGGCGGCGAAGAA 300 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GGCCGCCGAGGGTGCTAAACAAGAAGAGGGGAAATACAAACACACGGTGGATCTACCAAA 360 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GACAACTTTTGGCTTGAGAGCTAATTCTGTTGTGCGGGAGCCGGAGCTCCAGAAGTTGTG 420 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GGAGGAGAACCAGGTGCTCAAGAGGGTATCAGAAAGGAACACTGGGGCTACATTTGTTCT 480 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 CCATGATGGTCCTCCTTATGCTAATGGTGATCTTCATATGGGCCATGCACTGAATAAAAT 540 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 CCTCAAAGATATTATAAACCGTTACGAGCTGCTTCAGAATCACAAAGTTTCTTTTATTCC 600 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TGGATGGGATTGCCATGGCCTTCCAATCGAATTAAAAGTTCTAAAGTCACTGGACAAGGA 660 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 AACATTGAATGCTCTGACACCTATAAAATTAAGGCAGAAGGCTGCAAAATTTGCTAAAGC 720 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GACGGTTACTACACAAATGAATTCTTTCAAGCGGTTTGGTGTATGGGCAGATTGGGACAA 780 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 CCCTTATCTAACTCTGTCACCAGAGTATGAAGCTGCTCAGCTAGAAGTTTTTGGCCAAAT 840 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GGTTATGAAAGGATATATCTACCGCGGGCGAAAACCTGTTCATTGGAGTCCGTCATCACG 900 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TACAGCTTTAGCAGAAGCTGAGTTGGAGTATTCAGAAAATCATATTTCCAAAAGCATGTA 960 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TGCTGCATTCAAGATCACTAATCTGTCTAAGCCTGGGTTGCTGGAGGAATTTCTCCCTAA 1020 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TTTATGCCTAGCCATATGGACCACTACTCCATGGACGATTCCTGCTAATGCTGCTGTTGC 1080 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TGTGAACCCTGAGCTCACTTATGTAGTAGTTGAGCTGCAATCTGTACTAGAAAGTGAATC 1140 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 AACATCTGGTGGAAATCAACGAAAGCTTGGGAGTATTTTGAGCCCTGGGAGTCAGAAACC 1200 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 ATTTATCATCGTGGCTGCTGATCTTGTCTCAGCTCTAGAGTCCAAGTGGGGTACGAAGCT 1260 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TATAATCCAGAAATCATTTCCTGGGTCAGCCTTGGAGCACTGCAGGTATATTCATCCTGT 1320 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GAATGGCAATGAATGTTCTGTTGTTCTTGGAGGAGATTACATAACAACTGAATCTGGCAC 1380 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TGGCCTTGTTCATACTGCCCCTGGCCATGGTCAGGAAGACTACATAACAGGTTTGAAATA 1440 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TGGGCTTCCTATTGTGTCTCCTGTGGATGATGAAGGAAACTTCACTGCTGAAGCTGGACA 1500 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 ATTCAGTGGTTTATCTGTTCTGGGAGCTGGTAATGCCGCGGTTGTGAATTATCTGGATGA 1560 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 ACAGTGTTCTCTCATTTTAGAGGAGCCTTACAAACACAAGTACCCCTATGACTGGCGGTC 1620 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TAAAGAACCAACAATATTCCGAGCAACTGAACAATGGTTTGCCTCGGTGGGTGGTTTCCG 1680 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TAATGCTGCAATGGATGCAATTAGGCGAGTATCTTGGATTCCTTCTCAGGCTGAAAATAG 1740 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GATTGTGGCCATGACTTCAAGCCGTTCTGACTGGTGTATTTCGCGGCAGAGAACTTGGGG 1800 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GGTTCCTATTCCGGTCTTCTATCATGTAGACTCGAATGAACCTCTTATAACTGAAGAAAC 1860 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TATTGAACACATCAAGGGTATAGTGTCAAAGAAAGGGAGTGATGCCTGGTGGTATATGAC 1920 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 AATTGAGGAACTTCTTCCTGAAAAATATCGTGATAAAGCATCTGAGTATCGCAAGGGAAC 1980 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TGATACAATGGACGTTTGGTTTGACTCTGGCTCCTCATGGGCTGCTGTTTTGGCACAAAG 2040 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 AGATGGCCTTAATTTTCCAGCGGATATATACCTTGAAGGTTCAGACCAACACCGTGGATG 2100 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GTTTCAGAGCTCATTGTTAACCAGCATTGCTACTACAGGAAAGGCTCCATATTCTAGTGT 2160 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TATAACCCATGGTTTTGTACTGGACGAAAAGGGTTTCAAGATGAGCAAATCTCTTGGTAA 2220 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TGTGGTTGATCCTGGGAAAGTAATTGTTGGTGGTAAAAATTCAAAGCAAGAACCTGGCTA 2280 consensus_11561#1 -------AGTTTTGCCTAATGAAATATCAAT--CAACCTTTTGTAGCAAGAACCTGGCTA 51 * ** ** ** * * * ** ** **************** consensus_11561#0 TGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGT 2340 consensus_11561#1 TGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGT 111 ************************************************************ consensus_11561#0 TGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCG 2400 consensus_11561#1 TGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCG 171 ************************************************************ consensus_11561#0 ATTCCTATTGTCGAATCTCCATGATTGGGAACCAGAAAATTCTGTGCGCTACAGTGATCT 2460 consensus_11561#1 ATTCCTATTGTCGAATCTCCATGATTGGAAACCAGAAAATTCTGTGCGCTACAGTGATCT 231 **************************** ******************************* consensus_11561#0 ACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGA 2520 consensus_11561#1 ACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGA 291 ************************************************************ consensus_11561#0 TAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGT 2580 consensus_11561#1 TAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGT 351 ************************************************************ consensus_11561#0 TGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGT 2640 consensus_11561#1 TGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGT 411 ************************************************************ consensus_11561#0 TAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAG 2700 consensus_11561#1 TAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAG 471 ************************************************************ consensus_11561#0 AGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCA 2760 consensus_11561#1 AGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCA 531 ************************************************************ consensus_11561#0 ACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAA 2820 consensus_11561#1 ACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAA 591 ************************************************************ consensus_11561#0 GAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGA 2880 consensus_11561#1 GAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGA 651 ************************************************************ consensus_11561#0 GTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTC 2940 consensus_11561#1 GTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTC 711 ************************************************************ consensus_11561#0 TAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAA 3000 consensus_11561#1 TAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAA 771 ************************************************************ consensus_11561#0 GGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATCACATCTGA 3060 consensus_11561#1 GGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTA---------- 821 ************************************************** consensus_11561#0 GGTGGAGATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTACACTGGAAC 3120 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGATGGCGAAAA 3180 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 ATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCATCCTACTCT 3240 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 TTGTGCCCGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCGGCTGTCAG 3300 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 CTGAGGCTGCTCGAGAGTGACAAGGACCACTATCAGCTTCATTTGAAGATTATAGGTGGA 3360 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 ATTAATTGTTTTTGTTCTACAATTTTGTTCCCCTCTGACCGATGATGCTAGAGGAAGGGG 3420 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 AAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTTGCGTACAATAAGTT 3480 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 GTACCTTGATTTTTGACCATTGCTTGGCTTCCTGGAGCTGTAATTGTATATTTGTATTGC 3540 consensus_11561#1 ------------------------------------------------------------ consensus_11561#0 AGAACTCACACGGATTAAAGATGGAAACA 3569 consensus_11561#1 ----------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||