cluster # 11567

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Oryza sativa
cluster # 11567 cluster # 11567 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11567#0 length = 2599 sequences # 8

consensus_11567#1 length = 792 sequences # 1

consensusID : consensus_11567#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2599
fasta sequence

                              [CCCCCCCCGTCCGTCCTCCGATCCGATCCGATCCCGACACCACCGCCTCCGGTGGTAGATCTGGATCGGAGCCACCCCGCCGCCGGCGATCCCCGGCATCCTCTCCACCCATCGGTAGCCCCTCCGCCGCCGCAGCCGACGACGACATGGACGCTGCCCCCGCCGCCGCCGAGGCGCACGACGGGCAGAGGGAGCGGTTCGACCTCGGGGTGTTGGTTGGCGACCTCGCCCTCGACGAGGATGTCGCCAGTGATGAGGACGAGTCGCTGGAGGGGTTGAGGCAGGAGCTCGACGACTGCAAGGACGACGAGGAAGTGGCAAATATCCTGGCTAACGGCATCAAACTGCGTGATTACACAAAAGGCGTCGAGAACAACATTCGCCAAATTGAGCTGGATTCTATACAGGATTACATTGGAGAAAGTGAAAACTTGGTATCGCTGCATGATCAGATTCGTGACTGTGATAACATTTTGTCACAAATGGAAACTGTTCTGACTGGATTCCAGACAGAAATTGGTTCTATAAGTTCGGAGATAAAGGTCCTTCAGGAGAAATCTATGGACATGGGATTAAAGTTGAAAAATCGTAAGGCTGCAGAGTCTAAATTGTCAAAATTTGTTGAGGATATAATAGTGCCTCCAAGAATGATTGACATAATTGTCGATGGAGAGGTTAATGACGAATACATGAAAACACTTGAGACTCTAAGCAGAAAAATCAAGTTCATTGAAGTTGATGCAATGGTTAAATCGTCCAAGGCTCTAAAGGATGTTCAACCTGAGGTTGAGAGACTTAGGCAGAAAGCAGTCTCAAAGATTTTTGAATTTGTCATCCAAAAGTTCTATGCCTTGAGAAAACCGAAAACAAATATTCAGATTCTACAGCAGAGTGTTCTTCTTAAATACAAGTACACGATAGTTTTTCTTAA-GGAACATGCTAAGGAGATATATGCGGAAG-TTCGTGCAGCTTATATTGATACCATGAACAAGGTGCTGAGTGCACATTTCCGTGCGTATATTCAAGCATTAGAGAAACTACAACTGGACATAGCAACCTCTACCGACTTACTTGGAGTTGAAACTAGAAGTACAGGATTCCTTTTCTCCATGGGAAAAGAATCTCTGAAGACCCGTTCTTCTGTCTTTGCTTTGGGTGAAAGGATAAACATATTAAAGGAAATTGATCAGCCTGCCTTGATACCTCACATAGCTGAAGCCAAGTCTCAAAAATATCCATATGAAGTTCTTTTCAGAAGCTTGCAAAAACTTTTGATTGATACAGCTACTTCAGAGTACCTTTTCTCTGATGATTTCTTTGGTGAAGAATCACTGTTTAATGACATATTTGCAGGACCTATCCAAGTTGTTGATGAACATTTCAATGCTGTGCTCCTGAACTGTTATGACGCAATCGGCATAATGCTTATGATCCGAATAATTCATCAGCATCAGCTAATCATGTTTAAGCGGCGAATCCCATGTTTGGACTCTTACTTAGACAAGGTTAACTTATCACTCTGGCCTCGCTTCAAGATGGTGTTTGATTTGCATTTGAACAGCTTACGAAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCATTAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATGGTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGTTGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATTTAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTATTATTCTCATGTAACGAAAATCCTGATATATGCTATGCATGTTGGTTGGGTTTGACACGGAA--CTCTGTTTCTCTTGCTATTTGGCAGATGTTAAGAAATTACACGGGGGTGTATCTAAAATAGTTTTTCGATTGAGAGTAATGGCTGTTTGTGGTAGATCGTTGAGCTGATTAGCGATTAGCTGCCTATCAGTCAGCCATTCAGATGTTCTTTAATTGTAGTCATAGCCATTCAGATGTTCTTTAATTGTCTGGCGGTGTTTGGGACCGTAGAAACTTATCCCCGCCTGTGGATAAGTGAATAGAAACACAT]

[+] EMBL CB626708             [CCCCCCCCGTCCGTCCTCCGATCCGATCCGATCCCGACACCACCGCCTCCGGTGGTAGATCTGGATCGGAGCCACCCCGCCGCCGGCGATCCCCGGCATCCTCTCCACCCATCGGTAGCCCCTCCGCCGCCGCAGCCGACGACGACATGGACGCTGCCCCCGCCGCCGCCGAGGCGCACGACGGGCAGAGGGAGCGGTTCGACCTCGGGGTGTTGGTTGGCGACCTCGCCCTCGACGAGGATGTCGCCAGTGATGAGGACGAGTCGCTGGAGGGGTTGAGGCAGGAGCTCGACGACTGCAAGGACGACGAGGAAGTGGCAAATATCCTGGCTAACGGCATCAAACTGCGTGATTACACAAAAGGCGTCGAGAACAACATTCGCCAAATTGAGCTGGATTCTATACAGGATTACATTGGAGAAAGTGAAAACTTGGTATCGCTGCATGATCAGATTCGTGACTGTGATAACATTTTGTCACAAATGGAAACTGTTCTGACTGGATTCCAGACAGAAATTGGTTCTATAAGTTCGGAGATAAAGGTCCTTCAGGAGAAATCTATGGACATGGGATTAAAGTTGAAAAATCGTAAGGCTGCAGAGTCTAAATTGTCAAAATTTGTTGAGGATATAATAGTGCCTCNCAGAATGATTGACATAATTGTCGATGGAGAGGTTAATGACGAATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK103622             [                TCCGATCCGATCCGATCCCGACACCACCGCCTCCGGTGGTAGATCTGGATCGGAGCCACCCCGCCGCCGGCGATCCCCGGCATCCTCGCCACCCATCGGTAGCCCCTCCGCCGCCGCAGCCGACGACGACATGGACGCTGCCCCCGCCGCCGCCGAGGCGCACGACGGGCAGAGGGAGCGGTTCGACCTCGGGGTGTTGGTCGGCGACCTCGCCCTCGACGAGGATGTCGCCAGTGATGAGGACGAGTCGCTGGAGGGGTTGAGGCAGGAGCTCGACGACTGCAAGGACGACGAGGAAGTGGCAAATATCCTGGCTAACGGCATCAAACTGCGTGATTACACAAAAGGCGTCGAGAACAACATTCGCCAAATTGAGCTGGATTCTATACAGGATTACATTGGAGAAAGTGAAAACTTGGTATCGCTGCATGATCAGATTCGTGACTGTGATAACATTTTGTCACAAATGGAAACTGTTCTGACTGGATTCCAGACAGAAATTGGTTCTATAAGTTCGGAGATAAAGGTCCTTCAGGAGAAATCTATGGACATGGGATTAAAGTTGAAAAATCGTAAGGCTGCAGAGTCTAAATTGTCAAAATTTGTTGAGGATATAATAGTGCCTCCAAGAATGATTGACATAATTGTCGATGGAGAGGTTAATGACGAATACATGAAAACACTTGAGACTCTAAGCAGAAAAATCAAGTTCATTGAAGTTGATGCAATGGTTAAATCGTCCAAGGCTCTAAAGGATGTTCAACCTGAGGTTGAGAGACTTAGGCAGAAAGCAGTCTCAAAGATTTTTGAATTTGTCATCCAAAAGTTCTATGCCTTGAGAAAACCGAAAACAAATATTCAGATTCTACAGCAGAGTGTTCTTCTTAAATACAAGTACACGATAGTTTTTCTTAA GGAACATGCTAAGGAGATATATGCGGAAG TTCGTGCAGCTTATATTGATACCATGAACAAGGTGCTGAGTGCACATTTCCGTGCGTATATTCAAGCATTAGAGAAACTACAACTGGACATAGCAACCTCTACCGACTTACTTGGAGTTGAAACTAGAAGTACAGGATTCCTTTTCTCCATGGGAAAAGAATCTCTGAAGACCCGTTCTTCTGTCTTTGCTTTGGGTGAAAGGATAAACATATTAAAGGAAATTGATCAGCCTGCCTTGATACCTCACATAGCTGAAGCCAAGTCTCAAAAATATCCATATGAAGTTCTTTTCAGAAGCTTGCAAAAACTTTTGATTGATACAGCTACTTCAGAGTACCTTTTCTCTGATGATTTCTTTGGTGAAGAATCACTGTTTAATGACATATTTGCAGGACCTATCCAAGTTGTTGATGAACATTTCAATGCTGTGCTCCTGAACTGTTATGACGCAATCGGCATAATGCTTATGATCCGAATAATTCATCAGCATCAGCTAATCATGTTTAAGCGGCGAATCCCATGTTTGGACTCTTACTTAGACAAGGTTAACTTATCACTCTGGCCTCGCTTCAAGATGGTGTTTGATTTGCATTTGAACAGCTTACGAAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCATGAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATGGTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGTTGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATTTAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTATTATTCTCATGTAACGAAAATCCTGATATATGCTATGCAGGTTGGTTGGGTTTGACACGGAA  CTCTGTTTCTCTTGCTATTTGGCAGATGTTAAGAAATTACACGGGGGTGTATCTAAAATAGTTTTTCGATTGAGAGTAATGGCTGTTTGTGGTAGATCGTTGAGCTGATTAGCGATTAGCTGCCTATCAGTCAGCCATTCAGATGTTCTTTAATTGTAGTCATAGCCATTCAGATGTTCTTTAATTGTCTGGCGGTGTTTGGGACCGTAGAAACTTATCCCCGCCTGTGGATAAGTGAATAGAAACACAT]
[+] EMBL CA765061             [                                                                                                                                                                                                                                                         GTGATGAGGACGAGTCGCTGGAGGGGTTGAGGCAGGAGCTCGACGACTGCAAGGACGACGAGGAAGTGGCAAATATCCTGGCTAACGGCATCAAACTGCGTGATTACACAAAAGGCGTCGAGAACAACATCCGCCAAATTGAGCTGGATTCTATACAGGATTACATTGGAGAAAGTGAAAACTTGGTATCGCTGCATGATCAGATTCGTGACTGTGATAACATTTTGTCACAAATGGAAACTGTTCTGACTGGATTC    CAGAAATTGGTTCTATAAGTTCGGAGATAAAGGTCCTTCAGGAGAAATCTATGGACATGGGATTAAAGTTGAAAAATCGTAAGGCTGCAGAGTCTAAATTGTCAAAATTTGTTGAGGATATAATAGTGCCTCCAAGAATGATTGACATAATTGTCGATGGAGAGGTTAATGACGAATACATGAAAACACTTGAGACTCTAAGCAGAAAAATCAAGTTCATTGAAGTTGATGCAATGGTTAAATCGTCCAAGGCTCTAAAGGATGTTCAACCTGAGGTTGAGAGACTTAGGCAGAAAGCAGTCTCAAGGATTTTTGAATTTGTCATCCAAAAGTTCTATGCCTTGAGAAAACCGAAAACAAATATTCAGATTCTACAGCAGAGTGTTCTTCTTAAATACAAGTACACGATAGTTTTTCTTAAGGGAACATGCTAAGGAGATATATGCGGAAGTTTCGTGCAGCTTATATTGATACCATGAACAAGGTGCTGAGTGCACATTTCCGTGCGTATATTCAAGCATTAGAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB000695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTCTT AATACAAGTACACGATAGTTTTTCTTAA GGAACATGCTAAGGAGATATATGCGGAAG TTCGTGCAGCTTATATTGATACCATGAACAAGGTGCTGAGTGCACATTTCCGTGCGTATATTCAAGCATTAGAGAAACTACAACTGGACATAGCAACCTCTACCGACTTACTTGGAGTTGAAACTAGAAGTACAGGATTCCTTTTCTCCATGGGAAAAGAATCTCTGAAGACCCGTTCTTCTGTCTTTGCTTTGGGTGAAAGGATAAACATATTAAAGGAAATTGATCAGCCTGCCTTGATACCTCACATAGCTGAAGCCAAGTCTCAAAAATATCCATATGAAGTTCTTTTCAGAAGCTTGCAAAAACTTTTGATTGATACAGCTACTTCAGAGTACCTGTTCTCTGATGATTTCTTTGGTGAAGAATCACTGTTTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB619573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATTAGAGAAACTACCCCTGGACATAGCAACCTCTACCGACTTACTTGGAGTTGAAACTAGAAGTACAGGATTCCTTTTCTCCATGGGAAAAGAATCTCTGAAGACCCGTTCTTCTGTCTTTGCTTTGGGTGAAAGGATAAACATATTAAAGGAAATTGATCAGCCTGCCTTGATACCTCACATAGCTGAAGCCAAGTCTCAAAAATATCCATATGAAGTTCTTTTCAGATTTTTGCAAAAACTTTTGATTGATACAGCTACTTCAGAGTACCTTTTCTCTGATGATTTCTTTGGTGAAGAATCACTGTTTAATGACATATTTGCAGGACCTATCCAAGTTGTTGATGAACATTTCAATGCTGTGCTCCTGAACTGTTATGACGCAATCGGCATAATGCTTATGATCCGAATAATTCATCAGCATCAGCTAATCATGTTTAAGCGGCGAATCCCATGTTTGGACTCTTACTTAGACAAGGTTAACTTATCACTCTGGCCTCGCTTCAAGATGGTGTTTGACTTGCATTTGAACAGCTTACGAAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCATTAGGAGATATGCTGAATTTACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB619574             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACAGCTTACGAAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCATTAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATGGTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGTTGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATTTAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTATTATTCTCATGTAACGAAAATCCAAAGATATGCTATGCATGTTGGTTGGGTTTGACACGG                                                                                                                                                                                                                                                              ]
[+] EMBL CB631285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAAACTGTTTTCCTGATAAACAACTATGATTTAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTATTATTCTCATGTAACGAAAATCCTGATATATGCTATGCATGTTGGTTGGGTTTGACACGGAACTCTCTGTTTCTCTTGCTATTTGGCAGATGTTAAGAAATTACACGGGGGTGTATCTAAAATAGTTTTTCGATTGAGAGTAATGGC                                                                                                                                                                       ]
[-] EMBL CB626709             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTGTTTTCTTGATAAACAACTATGATTTAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTATTATTCTCATGTAACGAAAATCCTGATATATGCTATGCATGTTGG                                                                                                                                                                                                                                                                             ]




>consensus_11567#0
CCCCCCCCGTCCGTCCTCCGATCCGATCCGATCCCGACACCACCGCCTCCGGTGGTAGAT
CTGGATCGGAGCCACCCCGCCGCCGGCGATCCCCGGCATCCTCTCCACCCATCGGTAGCC
CCTCCGCCGCCGCAGCCGACGACGACATGGACGCTGCCCCCGCCGCCGCCGAGGCGCACG
ACGGGCAGAGGGAGCGGTTCGACCTCGGGGTGTTGGTTGGCGACCTCGCCCTCGACGAGG
ATGTCGCCAGTGATGAGGACGAGTCGCTGGAGGGGTTGAGGCAGGAGCTCGACGACTGCA
AGGACGACGAGGAAGTGGCAAATATCCTGGCTAACGGCATCAAACTGCGTGATTACACAA
AAGGCGTCGAGAACAACATTCGCCAAATTGAGCTGGATTCTATACAGGATTACATTGGAG
AAAGTGAAAACTTGGTATCGCTGCATGATCAGATTCGTGACTGTGATAACATTTTGTCAC
AAATGGAAACTGTTCTGACTGGATTCCAGACAGAAATTGGTTCTATAAGTTCGGAGATAA
AGGTCCTTCAGGAGAAATCTATGGACATGGGATTAAAGTTGAAAAATCGTAAGGCTGCAG
AGTCTAAATTGTCAAAATTTGTTGAGGATATAATAGTGCCTCCAAGAATGATTGACATAA
TTGTCGATGGAGAGGTTAATGACGAATACATGAAAACACTTGAGACTCTAAGCAGAAAAA
TCAAGTTCATTGAAGTTGATGCAATGGTTAAATCGTCCAAGGCTCTAAAGGATGTTCAAC
CTGAGGTTGAGAGACTTAGGCAGAAAGCAGTCTCAAAGATTTTTGAATTTGTCATCCAAA
AGTTCTATGCCTTGAGAAAACCGAAAACAAATATTCAGATTCTACAGCAGAGTGTTCTTC
TTAAATACAAGTACACGATAGTTTTTCTTAAGGAACATGCTAAGGAGATATATGCGGAAG
TTCGTGCAGCTTATATTGATACCATGAACAAGGTGCTGAGTGCACATTTCCGTGCGTATA
TTCAAGCATTAGAGAAACTACAACTGGACATAGCAACCTCTACCGACTTACTTGGAGTTG
AAACTAGAAGTACAGGATTCCTTTTCTCCATGGGAAAAGAATCTCTGAAGACCCGTTCTT
CTGTCTTTGCTTTGGGTGAAAGGATAAACATATTAAAGGAAATTGATCAGCCTGCCTTGA
TACCTCACATAGCTGAAGCCAAGTCTCAAAAATATCCATATGAAGTTCTTTTCAGAAGCT
TGCAAAAACTTTTGATTGATACAGCTACTTCAGAGTACCTTTTCTCTGATGATTTCTTTG
GTGAAGAATCACTGTTTAATGACATATTTGCAGGACCTATCCAAGTTGTTGATGAACATT
TCAATGCTGTGCTCCTGAACTGTTATGACGCAATCGGCATAATGCTTATGATCCGAATAA
TTCATCAGCATCAGCTAATCATGTTTAAGCGGCGAATCCCATGTTTGGACTCTTACTTAG
ACAAGGTTAACTTATCACTCTGGCCTCGCTTCAAGATGGTGTTTGATTTGCATTTGAACA
GCTTACGAAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCA
TTAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATG
GTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGT
TGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATT
TAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTG
AGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCA
GTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACA
AGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTG
CAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGG
AGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTG
TCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCT
TATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACAC
TGGTGTATTATTCTCATGTAACGAAAATCCTGATATATGCTATGCATGTTGGTTGGGTTT
GACACGGAACTCTGTTTCTCTTGCTATTTGGCAGATGTTAAGAAATTACACGGGGGTGTA
TCTAAAATAGTTTTTCGATTGAGAGTAATGGCTGTTTGTGGTAGATCGTTGAGCTGATTA
GCGATTAGCTGCCTATCAGTCAGCCATTCAGATGTTCTTTAATTGTAGTCATAGCCATTC
AGATGTTCTTTAATTGTCTGGCGGTGTTTGGGACCGTAGAAACTTATCCCCGCCTGTGGA
TAAGTGAATAGAAACACAT

consensusID : consensus_11567#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 792
fasta sequence

                              [AAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCATTAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATGGTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGTTGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATTTAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTATTATTCTCATGTAACGAAAATCCTGATAGATGCTATGCATGTTGGTTGGGTTTGACACGGAAAATTAAAGGA]

[-] EMBL CB633653             [AAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCATTAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATGGTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGTTGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATTTAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTATTATTCTCATGTAACGAAAATCCTGATAGATGCTATGCATGTTGGTTGGGTTTGACACGGAAAATTAAAGGA]




>consensus_11567#1
AAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCATTAGGAG
ATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATGGTCAGCT
TGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGTTGGCTAA
GATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATTTAACGAT
TTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTGAGGAGGT
TCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCAGTGATTT
GATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACAAGGCCAG
TGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTGCAATTGA
GCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGGAGATCCT
GAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTGTCAAGAA
GATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCTTATATGA
GATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACACTGGTGTA
TTATTCTCATGTAACGAAAATCCTGATAGATGCTATGCATGTTGGTTGGGTTTGACACGG
AAAATTAAAGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11567#0      CCCCCCCCGTCCGTCCTCCGATCCGATCCGATCCCGACACCACCGCCTCCGGTGGTAGAT 60
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      CTGGATCGGAGCCACCCCGCCGCCGGCGATCCCCGGCATCCTCTCCACCCATCGGTAGCC 120
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      CCTCCGCCGCCGCAGCCGACGACGACATGGACGCTGCCCCCGCCGCCGCCGAGGCGCACG 180
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      ACGGGCAGAGGGAGCGGTTCGACCTCGGGGTGTTGGTTGGCGACCTCGCCCTCGACGAGG 240
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      ATGTCGCCAGTGATGAGGACGAGTCGCTGGAGGGGTTGAGGCAGGAGCTCGACGACTGCA 300
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AGGACGACGAGGAAGTGGCAAATATCCTGGCTAACGGCATCAAACTGCGTGATTACACAA 360
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AAGGCGTCGAGAACAACATTCGCCAAATTGAGCTGGATTCTATACAGGATTACATTGGAG 420
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AAAGTGAAAACTTGGTATCGCTGCATGATCAGATTCGTGACTGTGATAACATTTTGTCAC 480
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AAATGGAAACTGTTCTGACTGGATTCCAGACAGAAATTGGTTCTATAAGTTCGGAGATAA 540
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AGGTCCTTCAGGAGAAATCTATGGACATGGGATTAAAGTTGAAAAATCGTAAGGCTGCAG 600
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AGTCTAAATTGTCAAAATTTGTTGAGGATATAATAGTGCCTCCAAGAATGATTGACATAA 660
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TTGTCGATGGAGAGGTTAATGACGAATACATGAAAACACTTGAGACTCTAAGCAGAAAAA 720
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TCAAGTTCATTGAAGTTGATGCAATGGTTAAATCGTCCAAGGCTCTAAAGGATGTTCAAC 780
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      CTGAGGTTGAGAGACTTAGGCAGAAAGCAGTCTCAAAGATTTTTGAATTTGTCATCCAAA 840
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AGTTCTATGCCTTGAGAAAACCGAAAACAAATATTCAGATTCTACAGCAGAGTGTTCTTC 900
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TTAAATACAAGTACACGATAGTTTTTCTTAAGGAACATGCTAAGGAGATATATGCGGAAG 960
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TTCGTGCAGCTTATATTGATACCATGAACAAGGTGCTGAGTGCACATTTCCGTGCGTATA 1020
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TTCAAGCATTAGAGAAACTACAACTGGACATAGCAACCTCTACCGACTTACTTGGAGTTG 1080
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AAACTAGAAGTACAGGATTCCTTTTCTCCATGGGAAAAGAATCTCTGAAGACCCGTTCTT 1140
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      CTGTCTTTGCTTTGGGTGAAAGGATAAACATATTAAAGGAAATTGATCAGCCTGCCTTGA 1200
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TACCTCACATAGCTGAAGCCAAGTCTCAAAAATATCCATATGAAGTTCTTTTCAGAAGCT 1260
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TGCAAAAACTTTTGATTGATACAGCTACTTCAGAGTACCTTTTCTCTGATGATTTCTTTG 1320
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      GTGAAGAATCACTGTTTAATGACATATTTGCAGGACCTATCCAAGTTGTTGATGAACATT 1380
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TCAATGCTGTGCTCCTGAACTGTTATGACGCAATCGGCATAATGCTTATGATCCGAATAA 1440
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TTCATCAGCATCAGCTAATCATGTTTAAGCGGCGAATCCCATGTTTGGACTCTTACTTAG 1500
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      ACAAGGTTAACTTATCACTCTGGCCTCGCTTCAAGATGGTGTTTGATTTGCATTTGAACA 1560
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      GCTTACGAAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCA 1620
consensus_11567#1      -------AAATGCAAATGTTAAGACTCTTTGGGAGGATGATGTTCATCCTCACTATGTCA 53
                              *****************************************************

consensus_11567#0      TTAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATG 1680
consensus_11567#1      TTAGGAGATATGCTGAATTTACAGCATCCCTCGTGCATCTCAATGTTGAATATGGAGATG 113
                       ************************************************************

consensus_11567#0      GTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGT 1740
consensus_11567#1      GTCAGCTTGATCTTAATCTCGAGCGGTTGCGGATGGCTGTTGAGGAATTGCTTGTTAAGT 173
                       ************************************************************

consensus_11567#0      TGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATT 1800
consensus_11567#1      TGGCTAAGATGTTCCCTAAACAAAAGTTGCAAACTGTTTTCCTGATAAACAACTATGATT 233
                       ************************************************************

consensus_11567#0      TAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTG 1860
consensus_11567#1      TAACGATTTCCATACTGAAGGAAGCTGGCACTGAGGGTGGAAAAGCACAAGTTCACTTTG 293
                       ************************************************************

consensus_11567#0      AGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCA 1920
consensus_11567#1      AGGAGGTTCTTAAGAGCAATATTTCAGTATATGTGGAGGAACTTCTACTGGAGCATTTCA 353
                       ************************************************************

consensus_11567#0      GTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACA 1980
consensus_11567#1      GTGATTTGATCAAATTTGTGAAATCTCGCCCGTCTGAAGACACAGCATCAAGCTCGGACA 413
                       ************************************************************

consensus_11567#0      AGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTG 2040
consensus_11567#1      AGGCCAGTGTTAGTGATGTCGAGCCATTAGTCAAGGATTTTGCCGGTCGGTGGAAAGCTG 473
                       ************************************************************

consensus_11567#0      CAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGG 2100
consensus_11567#1      CAATTGAGCTTATGCACAAGGATGTCATTACATCTTTTAGCAACTTCCTCTGCGGAATGG 533
                       ************************************************************

consensus_11567#0      AGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTG 2160
consensus_11567#1      AGATCCTGAAAGCGGCACTCACGCAGCTGCTGCTGTACTATACAAGGATCACCGAGTGTG 593
                       ************************************************************

consensus_11567#0      TCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCT 2220
consensus_11567#1      TCAAGAAGATCAATGGTGGCTCTGCTCTCAACAAGGACCTGGTTTCCATATCCTCTATCT 653
                       ************************************************************

consensus_11567#0      TATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACAC 2280
consensus_11567#1      TATATGAGATCAAGAAATACTCCAGGACCTTTTAGTCAGTACTGGTCCTGCCATGTACAC 713
                       ************************************************************

consensus_11567#0      TGGTGTATTATTCTCATGTAACGAAAATCCTGATATATGCTATGCATGTTGGTTGGGTTT 2340
consensus_11567#1      TGGTGTATTATTCTCATGTAACGAAAATCCTGATAGATGCTATGCATGTTGGTTGGGTTT 773
                       *********************************** ************************

consensus_11567#0      GACACGGAACTCTGTTTCTCTTGCTATTTGGCAGATGTTAAGAAATTACACGGGGGTGTA 2400
consensus_11567#1      GACACGGAAAATTAAAGGA----------------------------------------- 792
                       *********   *                                               

consensus_11567#0      TCTAAAATAGTTTTTCGATTGAGAGTAATGGCTGTTTGTGGTAGATCGTTGAGCTGATTA 2460
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      GCGATTAGCTGCCTATCAGTCAGCCATTCAGATGTTCTTTAATTGTAGTCATAGCCATTC 2520
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      AGATGTTCTTTAATTGTCTGGCGGTGTTTGGGACCGTAGAAACTTATCCCCGCCTGTGGA 2580
consensus_11567#1      ------------------------------------------------------------
                                                                                   

consensus_11567#0      TAAGTGAATAGAAACACAT 2599
consensus_11567#1      -------------------