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Oryza sativa
cluster # 11569 cluster # 11569       Sequences # 9       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11569#0 length = 3111 sequences # 8  
 consensus_11569#1 length = 174 sequences # 1  
consensusID : consensus_11569#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 3111
fasta sequence 
                              [CCAAGCAGCTAAGACATCGATCGAGGACGCATCACGCATCCATTCCCGGCTAGCTGTTCGAAAATGGCGCGGCCGTGGTGCCCCGACGACGCTTACGCCTGCCTCTCCCTCCTCCTCCTGCTCCTCCTTCCTGCAGCCATGGCCACGTCGTACTCCTCTCTCTGCAGCTTCCCCGCCGAGGCCGCCGACCTCGTCGTCACCGCCGGAGAACACCAGTCCATCGCGGACCGGCTCAATCTTCCCTTGCCCTCCGACGGTTACTTCTCCGGCGGCGACAAGCTCCTCTTCGCCTCCGACGACCACCGCCTCCCACGTTCCTTCTCCTTCTTCACTCGCCGCGCGGCCCGCACCACCGACCCCGCCATCACCCACCTCGTCGCCACGGTCACCCTCTCCGGCTACCGCTTCTTCGGCGGGCGCTCGTGGCGCACCAACGTTAGCGCCCACTCCGTGTCGTTCGACCTCGAAGGTTACTACTCCAACGACTCTGCCTCGGCGGCGCTCTGCATGGTCGGGTCAGGCTCCCGCGCAAGAGACGACGGCTTGGGTGTCGTCATCATCCCGGACGTCGCCCTCCGCCTCCGGCTGCCGCGCCCCGCCACCCTCACGCGGCCCTTCGTCACCGGCCGCCTCGAGGGCCCGGACTTCGGCGCCGTCACCCTCGTTGCGTACGCCGAGGGTGACTACAAGTACGGTGAGGCCGCCTCCTGCCCGACGCCGCCCGGCGCCGTGCGGTCCGAGAGCAAGGTGTTCGACGGAAACTTCACGTGCGACCGTCTCGGGGCGCTGCTCCGAGGCTCCTACACCATGGAGTACGCGGAGGGACGCGCGCCGAGCGGCTTCCCTCTGCGCCAACGCCTTCGCAGCATGCACATCAGCGAGATTTACTGCGGCGAGAACGGCGCCGTGCGCGCGTACATGGTGTTCGACTTCGACGACGCCTCATCGGACGCCATTCTTCTAGGCATCCACGAAGCGCCGTGGAGGCGTGGCTTCCAGGCCGACGGGGACGAGGCGCTCGTCGCCGACGGGTTCTGGAAACCGTCCCAGGGACGGCTCTGCCTCAGGGCGTGCCGCACCGTGCGCTCGACGGTGCGCGAGAGCGACTGCGGCATCCGGATCCACTTCTGGTTCCCGGCCGTGTGGTCGATCCAGCAACGGAGCTTCGTAGCCGGGATGATCCGGAACACGAGGAGCGACGACGACGGCGACACGAACAAAATGTCCGGCGCGATATCGGTGTCAAGAACTGGCTTCAGGGGCGATCTCTCCGACATCAAGTACCATTACACCAGAGTGGAGGACGCCAAGAACTACTACCACTCCAACCCAGAGCTGAGCAAGGAGAGGAACGGCAGGTTTCCGGGGAACTACTCCTACCGGGACTTCGCGTTCAGTTTGTACATCACGACACACGGCGGATACGGGTACGCCTCGCCGGTCACGCTCGGTTCCGCCATGGTTGACGGTGGCACGCTGACGGCCGACGACGCGTTCTCTCGCCACGCTGTGGCAGAGATGATCAAGCAGAGGCTCCTGAGTGTCAGCTACGAATTCGATATCCACCTCTATCGTCGCGTGAATTCATCCAGGGCGTGGAATGTGTCGCGTGTGCCTGATCGGTGGCGCGTCTCGGCGGAAGGCGTTTATGATACCAAGTCAGGTACCCTGTGCATGGTAGGTTGCCGAGTGATCAACAGTTCGTCGGACTGTCAGATCCTAGTGACCGTGCAACTCCCTGCGCTGGGCGGCGAGGACGGCACTGGGTCAATCAGCAGCCTGAGGAAGAAGAGTGACACCCTCTTCTTCGAGACGCTTGGTTTTGCTGCGTATGGTGCGCAGCCCGCCATAGAGGCGGCCCAGGCGATCTCGAGGGTGGACACGGAGCGCATCATGCTGGTGACCTCCATGACGCTGTCCTGCGTCTTCCTCGTCCTGCAGCTGCGCCACGCCAGGAAGAACCCCGACGCGCTCCCGGCCACGTCGATCACCATGCTCGCCGTCCTGGCCCTGGGTTACATGATCCCTCTCGTGGTCAACTACGAGGCCATGTTCGTGGACGACGGCGGCAGCAGAAACAGGCACTTCATCGAGCTGGCGAGGGGCGGCCGCCGGTGGCTCGAGCTGAACGAGTTCGTGCTGAGGCTCAGCACCATGGTGGCGTTCGTGCTGCAGCTGCGCCTCCTGCTTCTCGCGTTGTCCGCGAGATCAACGGCCGGAGCGAGCGGCGGCGGGGACGACCGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTGCCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGATCATCAGCCGTTG-GCCAGATGAAGTCCGCCATCCACGTGCCGCCGCCGCCGCCGCCGCCGCTGTCGGACGACCTCCTCTCCTACGCCGGCCTGATACTGGACGGGTTCCTGCTGCCCCAGATCGTGTCCAACGCGTTCTCGGCCTCCAGGGTGAACGCCATCTCGCCGTGGTTCTACGTGGGCGGCACCGCGATCCGCGCGGCGCCTCACGCGTACGACGGGCTCAGGGCTCGGGGGTACGTGCAGAGGTGGATCCCGTCCTACATCGACGTCTACGCGGGGCCTCGTGACGGGCTCTTCAGCGTCGCGTGGGACGTCGTGATACCGTGCGGGGCGGCGGCGCTGGCCGTGCTGCTCTTCTTTCAGCAGCGGCTCGGAGGTGATTTCCTGTGTTGTGTGAAGAGAAGGAAGCCGGGGGGATCATACGAGATAGTCTCGACGTCAACACTTTAACTGTTGACCGGCAATCCGTGGCATTCGTAGACATTAGTGCGGTTTGAATAAACAATACAGGGGGCGCAATTAGGGCCCGGGCGCCGGACGTCCTATATTTACACGGAATTGCAACTCATGTTTAAAAATGCGTCAAATTTAGTGTGGGACATTAAAAAAATAATCTTTGCTAGAATGATATCGAAAAAACGTGGTTTTGCTAGTACACTATTGAATGATTTTCGGCGGTTTTGGGAGGAAATTTTCACGAAATGATTATTTCCGCGCGCTGAAGTCCTGGAATGGATACGGCAAAAATTTAAAAATACACTGATCATTC]

[+] EMBL CB668736             [CCAAGCAGCTAAGACATCGATCGAGGACGCATCACGCATCCATTCCCGGCTAGCTGTTCGAAAATGGCGCGGCCGTGGTGCCCCGACGACGCTTACGCCTGCCTCTCCCTCCTCCTCCTGCTCCTCCTTCCTGCAGCCATGGCCACGTCGTACTCCTCTCTCTGCAGCTTCCCCGCCGAGGCCGCCGACCTCGTCGTCACCGCCGGAGAACACCAGTCCATCGCGGACCGGCTCAATCTTCCCTTGCCCTCCGACGGTTACTTCTCCGGCGGCGACAAGCTCCTCTTCGCCTCCGACGACCACCGCCTCCCACGTTCCTTCTCCTTCTTCACTCGCCGCGCGGCCCGCACCACCGACCCCGCCATCACCCACCTCGTCGCCACGGTCACCCTCTCCGGCTACCGCTTCTTCGGCGGGCGCTCGTGGCGCACCAACGTTAGCGCCCACTCCGTGTCGTTCGACCTCGAAGGTTACTACTCCAACGACTCTGCCTCGGCGGCGCTCTGCATGGTCGGGTCAGGCTCCCGCGCAAGAGACGACGGCTTGGGTGTCGTCATCATCCCGGACGTCGCCCTCCGCCTCCGGCTGCCGCGCCCCGCCACCCTCACGCGGCCCTTCGTCACCGGCCGCCTCGAGGGCCCGGACATCGGCGCCGTCACCCTCGTTGCGTACGCCGAGGGTGACTACAAGTACGGTGAGGCCGCCTCCTGCCCGACGCCGCCCGGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK068284             [                                                 CTAGCTGTTCGAAAATGGCGCGGCCGTGGTGCCCCGACGACGCTTACGCCTGCCTCTCCCTCCTCCTCCTGCTCCTCCTTCCTGCAGCCATGGCCACGTCGTACTCCTCTCTCTGCAGCTTCCCCGCCGAGGCCGCCGACCTCGTCGTCACCGCCGGAGAACACCAGTCCATCGCGGACCGGCTCAATCTTCCCTTGCCCTCCGACGGTTACTTCTCCGGCGGCGACAAGCTCCTCTTCGCCTCCGACGACCACCGCCTCCCACGTTCCTTCTCCTTCTTCACTCGCCGCGCGGCCCGCACCACCGACCCCGCCATCACCCACCTCGTCGCCACGGTCACCCTCTCCGGCTACCGCTTCTTCGGCGGGCGCTCGTGGCGCACCAACGTTAGCGCCCACTCCGTGTCGTTCGACCTCGAAGGTTACTACTCCAACGACTCTGCCTCGGCGGCGCTCTGCATGGTCGGGTCAGGCTCCCGCGCAAGAGACGACGGCTTGGGTGTCGTCATCATCCCGGACGTCGCCCTCCGCCTCCGGCTGCCGCGCCCCGCCACCCTCACGCGGCCCTTCGTCACCGGCCGCCTCGAGGGCCCGGACTTCGGCGCCGTCACCATCGTTGCGTACGCCGAGGGTGACTACAAGTACGGTGAGGCCACCTCCTGCCCGACGCCGCCCGGCGCCGTGCGGTCCGAGAGCAAGGTGTTCGACGGAAACTTCACGTGCGACCGTCTCGGGGCGCTGCTCCGAGGCTCCTACACCATGGAGTACGCGGAGGGACGCGCGCCGAGCGGCTTCCCTCTGCGCCAACGCCTTCGCAGCATGCACATCAGCGAGATTTACTGCGGCGAGAACGGCGCCGTGCGCGCGTACATGGTGTTCGACTTCGACGACGCCTCATCGGACGCCATTCTTCTAGGCATCCACGAAGCGCCGTGGAGGCGTGGCTTCCAGGCCGACGGGGACGAGGCGCTCGTCGCCGACGGGTTCTGGAAACCGTCCCAGGGACGGCTCTGCCTCAGGGCGTGCCGCACCGTGCGCTCGACGGTGCGCGAGAGCGACTGCGGCATCCGGATCCACTTCTGGTTCCCGGCCGTGTGGTCGATCCAGCAACGGAGCTTCGTAGCCGGGATGATCCGGAACACGAGGAGCGACGACGACGGCGACACGAACAAAATGTCCGGCGCGATATCGGTGTCAAGAACTGGCTTCAGGGGCGATCTCTCCGACATCAAGTACCATTACACCAGAGTGGAGGACGCCAAGAACTACTACCACTCCAACCCAGAGCTGAGCAAGGAGAGGAACGGCAGGTTTCCGGGGAACTACTCCTACCGGGACTTCGCGTTCAGTTTGTACATCACGACACACGGCGGATACGGGTACGCCTCGCCGGTCACGCTCGGTTCCGCCATGGTTGACGGTGGCACGCTGACGGCCGACGACGCGTTCTCTCGCCACGCTGTGGCAGAGATGATCAAGCAGAGGCTCCTGAGTGTCAGCTACGAATTCGATATCCACCTCTATCGTCGCGTGAATTCATCCAGGGCGTGGAATGTGTCGCGTGTGCCTGATCGGTGGCGCGTCTCGGCGGAAGGCGTTTATGATACCAAGTCAGGTACCCTGTGCATGGTAGGTTGCCGAGTGATCAACAGTTCGTCGGACTGTCAGATCCTAGTGACCGTGCAACTCCCTGCGCTGGGCGGCGAGGACGGCACTGGGTCAATCAGCAGCCTGAGGAAGAAGAGTGACACCCTCTTCCTCGAGACGCTTGGTTTTGCTGCGTATGGTGCGCAGCCCGCCATAGAGGCGGCCCAGGCGATCTCGAGGGTGGACACGGAGCGCATCATGCTGGTGACCTCCATGACGCTGTCCTGCGTCTTCCTCGTCCTGCAGCTGCGCCACGCCAGGAAGAACCCCGACGCGCTCCCGGCCACGTCGATCACCATGCTCGCCGTCCTGGCCCTGGGTTACATGATCCCTCTCGTGGTCAACTACGAGGCCATGTTCGTGGACGACGGCGGCAGCAGAAACAGGCACTTCATCGAGCTGGCGAGGGGCGGCCGCCGGTGGCTCGAGCTGAACGAGTTCGTGCTGAGGCTCAGCACCATGGTGGCGTTCGTGCTGCAGCTGCGCCTCCTGCTTCTCGCGTTGTCCGCGAGATCAACGGCCGGAGCGAGCGGCGGCGGGGACGACCGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTGCCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGATCATCAGCCGTTG GCCAGATGAAGTCCGCCATCCACGTGCCGCCGCCGCCGCCGCCGCCGCTGTCGGACGACCTCCTCTCCTACGCCGGCCTGATACTGGACGGGTTCCTGCTGCCCCAGATCGTGTCCAACGCGTTCTCGGCCTCCAGGGTGAACGCCATCTCGCCGTGGTTCTACGTGGGCGGCACCGCGATCCGCGCGGCGCCTCACGCGTACGACGGGCTCAGGGCTCGGGGGTACGTGCAGAGGTGGATCCCGTCCTACATCGACGTCTACGCGGGGCCTCGTGACGGGCTCTTCAGCGTCGCGTGGGACGTCGTGATACCGTGCGGGGCGGCGGCGCTGGCCGTGCTGCTCTTCTTTCAGCAGCGGCTCGGAGGTGATTTCCTGTGTTGTGTGAAGAGAAGGAAGCCGGGGGGATCATACGAGATAGTCTCGACGTCAACACTTTAACTGTTGGCCGGCAATCCGTGGCATTCGTAGACATTAGTGCGGTTTGAATAAACAATACAGGGGGCGCAATTAGGGCCCGGGCGCCGGACGTCCTATATTTACACGGAATTGCAACTCATGTTTAAAAATGCGTCAAATTTAGTGTGGGACATTAAAAAAATAATCTTTGCTAGAATGATATCGAAAAAACGTGGTTTTGCTAGTACACTATTGAATGATTTTCGGCGGTTTTGGGAGGAAATTTTCACGAAATGATTATTTCCGCGCGCTGAAGTCCTGGAATGGATACGGCAAAAATTTAAAAATACACTGATCATTC]
[+] EMBL CB629849             [                                                                                                                                                                                                                                                                                                                                                                                    CTCGTCGCCACGGTCACCCTCTCCGGCTACCGCTTCTTCGGCGGGCGCTCGTGGCGCACCAACGTTAGCGCCCACTCCGTGTCGTTCGACCTCGAAGGTTACTACTCCAACGACTCTGCCTCGGCGGCGCTCTGCATGGTCGGGTCAGGCTCCCGCGCAAGAGACGACGGCTTGGGTGTCGTCATCATCCCGGACGTCGCCCTCCGCCTCCGGCTGCCGCGCCCCGCCACCCTCACGCGGCCCTTCGTCACCGGCCGCCTCGAGGGCCCGGACTTCGGCGCCGTCACCCTCGTTGCGTACGCCGAGGGTGACTACAAGTACGGTGAGGCCGCCTCCTGCCCGACGCCGCCCGGCGCCGTGCGGTCCGAGAGCAAGGTGTTCGACGGAAACTTCACGTGCGACCGTCTCGGGGCGCTGCTCCGAGGCTCCTACACCATGGAGTACGCGGAGGGACGCGCGCCGAGCGGCTTCCCTCTGCGCCAACGCCTTCGCAGCATGCACATCAGCGAGATTTACTGCGGCGAGAACGGCGCCGTGCGCGCGTACATGGTGTTCGACTTCGACGACGCCTCATCGGACGCCATTCTTCTAGGCATCCACGAAGCGCCGTGGAGGCGTGGCTTCCAGGCCGACGGGGACGAGGCGCTCGTCGCCGACGGGTTCTGGAAACCGTCCCAGGGACGGCTCTGCCTCAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA764477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAAAATGTCCGGCGCGATATCGGTGTCAAGAACTGGCTTCAGGGGCGATCTCTCCGACATCAAGTACCATTACACCAGAGTGGAGGACGCCAAGAACTACTACCACTCCAACCCAGAGCTGAGCAAGGAGAGGAACGGCAGGTTTCCGGGGAACTACTCCTACCGGGACTTCGCGTTCAGTTTGTACCTCACGACACACGGCGGATACGGGTACGCCTCGCCGGTCACGCTCGGTTCCGCCATGGTTGACGGTGGCACGCTGACGGCCGACGACGCGTTCTCTCGCCACGCTGTGGCAGAGATGATCAAGCAGAGGCTCCTGAGTGTCAGCTACGAATTCGATATCCACCTCTATCGTCGCGTGAATTCATCCAGGGCGTGGAATGTGTCGCGTGTGCCTGATCGGTGGCGCGTCTCGGCGGAAGGCGTTTATGATACCAAGTCAGGTACCCTGTCCATGGTAGGTTGCCGAGTGATCAACAGTTCGTCGGACTGTCAGATCCTAGTGACCGTGCAACTCCCTGCGCTGGGCGGCGAGGACGGCACTGGGTCAATCAGCAGCCTGAGGAAGAAGAGTGACACCCTCTTCTTCGAGACGCTTGGTTTTGCTGCGTATGGTGCGCAGCCCGNCATAGAGGCGGNCCAGGCGATCTCGAGGGTGGACACGGAGCGCATCATGCTGGTGACCTNCATGACGCTGTCCTGCGTCTTNCTCGTCCTGCAGCTGCGCCACGCCAGGAAAAANCCCGACGCGCTNCCGGNCACGTCGATCA CATGCTCGCCGGCCTGG CCTGGG TACATGATCCCTNTCG GGNC ACTACNA GNCNTGTTCGNGGAC ACGGCGGCAGCANAAACAGGCNCTTNATCGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB661306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTCTATCCCCGCGTGAATTCATCCAGGGCGTGGAATGTGTCGCGTGTGCCTGATCGGTGGCGCGTCTCGGCGGAAGGCGTTTATGATACCAAGTCAGGTACCCTGTGCATGGTAGGTTGCCGAGTGATCAACAGTTCGTCGGACTGTCAGATCCTAGTGACCGTGCAACTCCCTGCGCTGGGCGGCGAGGACGGCACTGGGTCAATCAGCAGCCTGAGGAAGAAGAGTGACACCCTCTTCTTCGAGACGCTTGGTTTTGCTGCGTATGGTGCGCAGCCCGCCATAGAGGCGGCCCAGGCGATCTCGAGGGTGGACACGGAGCGCATCATGCTGGTGACCTCCATGACGCTGTCCTGCGTCTTCCTCGTCCTGCAGCTGCGCCACGCCAGGAAGAACCCCGACGCGCTCCCGGCCACGTCGATCACCATGCTCGCCGTCCTGGCCCTGGGTTACATGATCCCTCTCGTGGTCAACTACGAGGCCATGTTCGTGGACGACGGCGGCAGCAGAAACAGGCACTTCATCGAGCTGGCGAGGGGCGGCCGCCGGTGGCTCGAGCTGAACGAGTTCGTGCTGAGGCTCAGCACCATGGTGGCGTTCGTGCTGCAGCTGCGCCTCCTGCTTCTCGCGTTGTCCGCGAGATCAACGGCCGGAGCGAGCGGCGGCGGGGACGACCGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTGCCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGATCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB668737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGGCGGGGACGACCGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTGCCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGATCATCAGCCGTTG GCCAGATGAAGTCCGCCATCCACGTGCCGCCGCCGCCGCCGCCGCCGCTGTCGGACGACCTCCTCTCCTACGCCGGCCTGATACTGGACGGGTTCCTGCTGCCCCAGATCGTGTCCAACGCGTTCTCGGCCTCCAGGGTGAACGCCATCTCGCCGTGGTTCTACGTGGGCGGCACCGCGATCCGCGCGGCGCCTCACGCGTACGACGGGCTCAGGGCTCGGGGGTACGTGCAGAGGTGGATCCCGTCCTACATCGACGTCTACGCGGGGCCTCGTGACGGGCTCTTCAGCGTCGCGTGGGACGTCGTGATACCGTGCGGGGCGGCGGCGCTGGCCGTGCTGCTCTTCTTTCAGCAGCGGCTCGGAGGTGATTTCCTGTGTTGTGTGAAGAGAAGGAAGCCGGGGGGATCATACGAGATAGTCTCGACGTCAACACTTTAACTGTTGACCGGCAATCCGTGGCATTCGTAGACATTAGTGCGGTTTGAATAAACAATACAGGGGGCGCAATTAGGGCCCGGGCGCCGGACGTCCTATATTTACACGGAATTGCAACTCATGTTTAAAAATGCGTCAAATTTAGTGTGAGAGATTAAAAAAATAATCTTTGCTAGAATGATATC                                                                                                                                         ]
[-] EMBL CB629850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACGACCGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTGCCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGATCATCAGCCGTTGAGCCAGATGAAGTCCGCCATCCAAGTGCCGCCGCCGCCGCCGCCGCCGCTGTTGGACGACCTCCTTTCTTACGCCGGCCTGATACTGGACGGGTTCCTGCTGCCCCAGATCGTGTCCAACGCGTTTTCGGCCTCCAGGGTGAACGCCATCTCGCCGTGGTTTTACGTGGGCGGCACCGCGATCCGCGCGGCGCCTCACGCGTACGACGGGCTCAGGGCTCGGGGGTACGTGCAGAGGTGGATCCCGTCCTACATCGACGTTTACGCGGGGCCTCGTGACGGGCTTTTCAGCGTCGCGTGGGACGTCGTGATACCGTGCGGGGCGGCGGCGCTGGCCGTGCTGCTTTTTTTTCAGCAGCGGCTCGGAGGTGATTTCCTGTGTTGTGTGAAGAGAAGGAAGCCGGGGGGATCATACGAGATAGTTTCGACGTCAACACTTTAACTGTTGACCGGCAATCCGTGGCATTTGTAGACATTAGTGCGGTTTGAATAAACAATACAGGGGGCGCAATTAGGGCCCGGGCGCCGGACGTCCTATATTTACACGGCATTGCAACTCATGTTTAAAAATGCGTCAAATTTAGTG                                                                                                                                                                               ]
[-] EMBL CB661307             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTGCCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGATCATCAGCCGTTG GCCAGATGAAGTCCGCCATCCACGTGCCGCCGCCGCCGCCGCCGCCGCTGTCGGACGACCTCCTCTCCTACGCCGGCCTGATACTGGACGGGTTCCTGCTGCCCCAGATCGTGTCCAACGCGTTCTCGGCCTCCAGGGTGAACGCCATCTCGCCGTGGTTCTACGTGGGCGGCACCGCGATCCGCGCGGCGCCTCACGCGTACGACGGGCTCAGGGCTCGGGGGTACGTGCAGAGGTGGATCCCGTCCTACATCGACGTCTACGCGGGGCCTCGTGACGGGCTCTTCAGCGTCGCGTGGGACGTCGTGATACCGTGCGGGGCGGCGGCGCTGGCCGTGCTGCTCTTCTTTCAGCAGCGGCTCGGAGGTGATTTCCTGTGTTGTGTGAAGAGAAGGAAGCCGGGGGGATCATACGAGATAGTCTCGACGTCAACACTTTAACTGTTGACCGGCAATCCGTGGCATTCGTAGACATTAGTGCGGTTTGAATAAACAATACAGGGGGCGCAATGAGGGCCCGGGCGCCGGACGTCCTATATTTACACGGAATTGCAACTCATGTT                                                                                                                                                                                                     ]




>consensus_11569#0
CCAAGCAGCTAAGACATCGATCGAGGACGCATCACGCATCCATTCCCGGCTAGCTGTTCG
AAAATGGCGCGGCCGTGGTGCCCCGACGACGCTTACGCCTGCCTCTCCCTCCTCCTCCTG
CTCCTCCTTCCTGCAGCCATGGCCACGTCGTACTCCTCTCTCTGCAGCTTCCCCGCCGAG
GCCGCCGACCTCGTCGTCACCGCCGGAGAACACCAGTCCATCGCGGACCGGCTCAATCTT
CCCTTGCCCTCCGACGGTTACTTCTCCGGCGGCGACAAGCTCCTCTTCGCCTCCGACGAC
CACCGCCTCCCACGTTCCTTCTCCTTCTTCACTCGCCGCGCGGCCCGCACCACCGACCCC
GCCATCACCCACCTCGTCGCCACGGTCACCCTCTCCGGCTACCGCTTCTTCGGCGGGCGC
TCGTGGCGCACCAACGTTAGCGCCCACTCCGTGTCGTTCGACCTCGAAGGTTACTACTCC
AACGACTCTGCCTCGGCGGCGCTCTGCATGGTCGGGTCAGGCTCCCGCGCAAGAGACGAC
GGCTTGGGTGTCGTCATCATCCCGGACGTCGCCCTCCGCCTCCGGCTGCCGCGCCCCGCC
ACCCTCACGCGGCCCTTCGTCACCGGCCGCCTCGAGGGCCCGGACTTCGGCGCCGTCACC
CTCGTTGCGTACGCCGAGGGTGACTACAAGTACGGTGAGGCCGCCTCCTGCCCGACGCCG
CCCGGCGCCGTGCGGTCCGAGAGCAAGGTGTTCGACGGAAACTTCACGTGCGACCGTCTC
GGGGCGCTGCTCCGAGGCTCCTACACCATGGAGTACGCGGAGGGACGCGCGCCGAGCGGC
TTCCCTCTGCGCCAACGCCTTCGCAGCATGCACATCAGCGAGATTTACTGCGGCGAGAAC
GGCGCCGTGCGCGCGTACATGGTGTTCGACTTCGACGACGCCTCATCGGACGCCATTCTT
CTAGGCATCCACGAAGCGCCGTGGAGGCGTGGCTTCCAGGCCGACGGGGACGAGGCGCTC
GTCGCCGACGGGTTCTGGAAACCGTCCCAGGGACGGCTCTGCCTCAGGGCGTGCCGCACC
GTGCGCTCGACGGTGCGCGAGAGCGACTGCGGCATCCGGATCCACTTCTGGTTCCCGGCC
GTGTGGTCGATCCAGCAACGGAGCTTCGTAGCCGGGATGATCCGGAACACGAGGAGCGAC
GACGACGGCGACACGAACAAAATGTCCGGCGCGATATCGGTGTCAAGAACTGGCTTCAGG
GGCGATCTCTCCGACATCAAGTACCATTACACCAGAGTGGAGGACGCCAAGAACTACTAC
CACTCCAACCCAGAGCTGAGCAAGGAGAGGAACGGCAGGTTTCCGGGGAACTACTCCTAC
CGGGACTTCGCGTTCAGTTTGTACATCACGACACACGGCGGATACGGGTACGCCTCGCCG
GTCACGCTCGGTTCCGCCATGGTTGACGGTGGCACGCTGACGGCCGACGACGCGTTCTCT
CGCCACGCTGTGGCAGAGATGATCAAGCAGAGGCTCCTGAGTGTCAGCTACGAATTCGAT
ATCCACCTCTATCGTCGCGTGAATTCATCCAGGGCGTGGAATGTGTCGCGTGTGCCTGAT
CGGTGGCGCGTCTCGGCGGAAGGCGTTTATGATACCAAGTCAGGTACCCTGTGCATGGTA
GGTTGCCGAGTGATCAACAGTTCGTCGGACTGTCAGATCCTAGTGACCGTGCAACTCCCT
GCGCTGGGCGGCGAGGACGGCACTGGGTCAATCAGCAGCCTGAGGAAGAAGAGTGACACC
CTCTTCTTCGAGACGCTTGGTTTTGCTGCGTATGGTGCGCAGCCCGCCATAGAGGCGGCC
CAGGCGATCTCGAGGGTGGACACGGAGCGCATCATGCTGGTGACCTCCATGACGCTGTCC
TGCGTCTTCCTCGTCCTGCAGCTGCGCCACGCCAGGAAGAACCCCGACGCGCTCCCGGCC
ACGTCGATCACCATGCTCGCCGTCCTGGCCCTGGGTTACATGATCCCTCTCGTGGTCAAC
TACGAGGCCATGTTCGTGGACGACGGCGGCAGCAGAAACAGGCACTTCATCGAGCTGGCG
AGGGGCGGCCGCCGGTGGCTCGAGCTGAACGAGTTCGTGCTGAGGCTCAGCACCATGGTG
GCGTTCGTGCTGCAGCTGCGCCTCCTGCTTCTCGCGTTGTCCGCGAGATCAACGGCCGGA
GCGAGCGGCGGCGGGGACGACCGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTG
CCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGAT
CATCAGCCGTTGGCCAGATGAAGTCCGCCATCCACGTGCCGCCGCCGCCGCCGCCGCCGC
TGTCGGACGACCTCCTCTCCTACGCCGGCCTGATACTGGACGGGTTCCTGCTGCCCCAGA
TCGTGTCCAACGCGTTCTCGGCCTCCAGGGTGAACGCCATCTCGCCGTGGTTCTACGTGG
GCGGCACCGCGATCCGCGCGGCGCCTCACGCGTACGACGGGCTCAGGGCTCGGGGGTACG
TGCAGAGGTGGATCCCGTCCTACATCGACGTCTACGCGGGGCCTCGTGACGGGCTCTTCA
GCGTCGCGTGGGACGTCGTGATACCGTGCGGGGCGGCGGCGCTGGCCGTGCTGCTCTTCT
TTCAGCAGCGGCTCGGAGGTGATTTCCTGTGTTGTGTGAAGAGAAGGAAGCCGGGGGGAT
CATACGAGATAGTCTCGACGTCAACACTTTAACTGTTGACCGGCAATCCGTGGCATTCGT
AGACATTAGTGCGGTTTGAATAAACAATACAGGGGGCGCAATTAGGGCCCGGGCGCCGGA
CGTCCTATATTTACACGGAATTGCAACTCATGTTTAAAAATGCGTCAAATTTAGTGTGGG
ACATTAAAAAAATAATCTTTGCTAGAATGATATCGAAAAAACGTGGTTTTGCTAGTACAC
TATTGAATGATTTTCGGCGGTTTTGGGAGGAAATTTTCACGAAATGATTATTTCCGCGCG
CTGAAGTCCTGGAATGGATACGGCAAAAATTTAAAAATACACTGATCATTC

consensusID : consensus_11569#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 174
fasta sequence 
                              [CGAGTGATCAACAGTTCGTCGGACTGTCAGATCTAGTGACCGTCAACTCCTGCCTGGCGCGAGACGCCACTGGTTCAATCACCAGCCTGAGGAAAGAAGAGGACACCCTCTTCTTCAGAGACCCTTGTTTTTCTGCGTATGTCCACCCCAATAGAGCGCCAGCATCTCGAGGTG]

[+] EMBL BI809047             [CGAGTGATCAACAGTTCGTCGGACTGTCAGATCTAGTGACCGTCAACTCCTGCCTGGCGCGAGACGCCACTGGTTCAATCACCAGCCTGAGGAAAGAAGAGGACACCCTCTTCTTCAGAGACCCTTGTTTTTCTGCGTATGTCCACCCCAATAGAGCGCCAGCATCTCGAGGTG]




>consensus_11569#1
CGAGTGATCAACAGTTCGTCGGACTGTCAGATCTAGTGACCGTCAACTCCTGCCTGGCGC
GAGACGCCACTGGTTCAATCACCAGCCTGAGGAAAGAAGAGGACACCCTCTTCTTCAGAG
ACCCTTGTTTTTCTGCGTATGTCCACCCCAATAGAGCGCCAGCATCTCGAGGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11569#0      CCAAGCAGCTAAGACATCGATCGAGGACGCATCACGCATCCATTCCCGGCTAGCTGTTCG 60
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      AAAATGGCGCGGCCGTGGTGCCCCGACGACGCTTACGCCTGCCTCTCCCTCCTCCTCCTG 120
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CTCCTCCTTCCTGCAGCCATGGCCACGTCGTACTCCTCTCTCTGCAGCTTCCCCGCCGAG 180
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GCCGCCGACCTCGTCGTCACCGCCGGAGAACACCAGTCCATCGCGGACCGGCTCAATCTT 240
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CCCTTGCCCTCCGACGGTTACTTCTCCGGCGGCGACAAGCTCCTCTTCGCCTCCGACGAC 300
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CACCGCCTCCCACGTTCCTTCTCCTTCTTCACTCGCCGCGCGGCCCGCACCACCGACCCC 360
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GCCATCACCCACCTCGTCGCCACGGTCACCCTCTCCGGCTACCGCTTCTTCGGCGGGCGC 420
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TCGTGGCGCACCAACGTTAGCGCCCACTCCGTGTCGTTCGACCTCGAAGGTTACTACTCC 480
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      AACGACTCTGCCTCGGCGGCGCTCTGCATGGTCGGGTCAGGCTCCCGCGCAAGAGACGAC 540
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GGCTTGGGTGTCGTCATCATCCCGGACGTCGCCCTCCGCCTCCGGCTGCCGCGCCCCGCC 600
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      ACCCTCACGCGGCCCTTCGTCACCGGCCGCCTCGAGGGCCCGGACTTCGGCGCCGTCACC 660
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CTCGTTGCGTACGCCGAGGGTGACTACAAGTACGGTGAGGCCGCCTCCTGCCCGACGCCG 720
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CCCGGCGCCGTGCGGTCCGAGAGCAAGGTGTTCGACGGAAACTTCACGTGCGACCGTCTC 780
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GGGGCGCTGCTCCGAGGCTCCTACACCATGGAGTACGCGGAGGGACGCGCGCCGAGCGGC 840
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TTCCCTCTGCGCCAACGCCTTCGCAGCATGCACATCAGCGAGATTTACTGCGGCGAGAAC 900
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GGCGCCGTGCGCGCGTACATGGTGTTCGACTTCGACGACGCCTCATCGGACGCCATTCTT 960
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CTAGGCATCCACGAAGCGCCGTGGAGGCGTGGCTTCCAGGCCGACGGGGACGAGGCGCTC 1020
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GTCGCCGACGGGTTCTGGAAACCGTCCCAGGGACGGCTCTGCCTCAGGGCGTGCCGCACC 1080
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GTGCGCTCGACGGTGCGCGAGAGCGACTGCGGCATCCGGATCCACTTCTGGTTCCCGGCC 1140
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GTGTGGTCGATCCAGCAACGGAGCTTCGTAGCCGGGATGATCCGGAACACGAGGAGCGAC 1200
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GACGACGGCGACACGAACAAAATGTCCGGCGCGATATCGGTGTCAAGAACTGGCTTCAGG 1260
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GGCGATCTCTCCGACATCAAGTACCATTACACCAGAGTGGAGGACGCCAAGAACTACTAC 1320
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CACTCCAACCCAGAGCTGAGCAAGGAGAGGAACGGCAGGTTTCCGGGGAACTACTCCTAC 1380
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CGGGACTTCGCGTTCAGTTTGTACATCACGACACACGGCGGATACGGGTACGCCTCGCCG 1440
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GTCACGCTCGGTTCCGCCATGGTTGACGGTGGCACGCTGACGGCCGACGACGCGTTCTCT 1500
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CGCCACGCTGTGGCAGAGATGATCAAGCAGAGGCTCCTGAGTGTCAGCTACGAATTCGAT 1560
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      ATCCACCTCTATCGTCGCGTGAATTCATCCAGGGCGTGGAATGTGTCGCGTGTGCCTGAT 1620
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CGGTGGCGCGTCTCGGCGGAAGGCGTTTATGATACCAAGTCAGGTACCCTGTGCATGGTA 1680
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GGTTGCCGAGTGATCAACAGTTCGTCGGACTGTCAGATCCTAGTGACCGTGCAACTCCCT 1740
consensus_11569#1      ------CGAGTGATCAACAGTTCGTCGGACTGTCAGATC-TAGTGACCGT-CAACTCCT- 51
                             ********************************* ********** *******  

consensus_11569#0      GCGCTGGGCGGCGAGGACGGCACTGGGTCAATCAGCAGCCTGAGGAAGAAGAGTGACACC 1800
consensus_11569#1      --GCCTGGCG-CGAG-ACGCCACTGGTTCAATCACCAGCCTGAGGAAAGAAGAGGACACC 107
                         **  **** **** *** ****** ******* ************  *    ******

consensus_11569#0      CTCTTCTTCGAGACGCTTGGTTTTGCTGCGTATGGTGCGCAGCCCGCCATAGAGGCGGCC 1860
consensus_11569#1      CTCTTCTTCAGAGACCCTTGTTTTTCTGCGTATGTC---CACCCCAATAGAGCGCCAGC- 163
                       *********      * * ***** *********     ** ***   * ** * * ** 

consensus_11569#0      CAGGCGATCTCGAGGGTGGACACGGAGCGCATCATGCTGGTGACCTCCATGACGCTGTCC 1920
consensus_11569#1      ------ATCTCGAGG-TG------------------------------------------ 174
                             ********* **                                          

consensus_11569#0      TGCGTCTTCCTCGTCCTGCAGCTGCGCCACGCCAGGAAGAACCCCGACGCGCTCCCGGCC 1980
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      ACGTCGATCACCATGCTCGCCGTCCTGGCCCTGGGTTACATGATCCCTCTCGTGGTCAAC 2040
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TACGAGGCCATGTTCGTGGACGACGGCGGCAGCAGAAACAGGCACTTCATCGAGCTGGCG 2100
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      AGGGGCGGCCGCCGGTGGCTCGAGCTGAACGAGTTCGTGCTGAGGCTCAGCACCATGGTG 2160
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GCGTTCGTGCTGCAGCTGCGCCTCCTGCTTCTCGCGTTGTCCGCGAGATCAACGGCCGGA 2220
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GCGAGCGGCGGCGGGGACGACCGGTGGGCAGCCGAGCGGAGCACGCTCTGGATATGCCTG 2280
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CCCCTATACATCGCCGGAGCCATCCTGATCTGGATCCCCCACATCGGTGACGGGCACGAT 2340
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CATCAGCCGTTGGCCAGATGAAGTCCGCCATCCACGTGCCGCCGCCGCCGCCGCCGCCGC 2400
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TGTCGGACGACCTCCTCTCCTACGCCGGCCTGATACTGGACGGGTTCCTGCTGCCCCAGA 2460
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TCGTGTCCAACGCGTTCTCGGCCTCCAGGGTGAACGCCATCTCGCCGTGGTTCTACGTGG 2520
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GCGGCACCGCGATCCGCGCGGCGCCTCACGCGTACGACGGGCTCAGGGCTCGGGGGTACG 2580
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TGCAGAGGTGGATCCCGTCCTACATCGACGTCTACGCGGGGCCTCGTGACGGGCTCTTCA 2640
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      GCGTCGCGTGGGACGTCGTGATACCGTGCGGGGCGGCGGCGCTGGCCGTGCTGCTCTTCT 2700
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TTCAGCAGCGGCTCGGAGGTGATTTCCTGTGTTGTGTGAAGAGAAGGAAGCCGGGGGGAT 2760
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CATACGAGATAGTCTCGACGTCAACACTTTAACTGTTGACCGGCAATCCGTGGCATTCGT 2820
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      AGACATTAGTGCGGTTTGAATAAACAATACAGGGGGCGCAATTAGGGCCCGGGCGCCGGA 2880
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CGTCCTATATTTACACGGAATTGCAACTCATGTTTAAAAATGCGTCAAATTTAGTGTGGG 2940
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      ACATTAAAAAAATAATCTTTGCTAGAATGATATCGAAAAAACGTGGTTTTGCTAGTACAC 3000
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      TATTGAATGATTTTCGGCGGTTTTGGGAGGAAATTTTCACGAAATGATTATTTCCGCGCG 3060
consensus_11569#1      ------------------------------------------------------------
                                                                                   

consensus_11569#0      CTGAAGTCCTGGAATGGATACGGCAAAAATTTAAAAATACACTGATCATTC 3111
consensus_11569#1      ---------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)