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Oryza sativa
cluster # 11580 cluster # 11580       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11580#0 length = 2036 sequences # 7  
consensus_11580#1 length = 750 sequences # 2  

consensusID : consensus_11580#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2036
fasta sequence
                              [TCTCATGGTCGCCTAGCCAAGCCAAGCCAAGCCAACCTCCTCGCCGAGGAGAGAGAAGAGAGGAGAGGAGACGAGAGGAGAGAGAAGCCGAGGAGGAGGAGAGAGAGAGAGAGGAGGCCGCTCCATTTGCCCCCCCCCCCATGGCCACGCTGCCGGGCGGGCCCCACCCCACCGGAGGCGGCGCCGCGGCGGACCCGATGCAGGTCGACCAGCCGCGCTCCGCCGCGGCCGCCGCAGCGGTCGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCGGCCACATAATCTCCACAACGATTGGAGGGAAGAATGGAGAACCTAAAAGGACGATTAGCTACATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGAATCGTCTTTCAGGCAAAATGTTTGGAGACTGGTGAGACTGTCGCCATTAAGAAGGTTTTACAGGACAAGCGTTACAAGAACAGGGAGTTGCAGATTATGCGATCAATGGATCATTGCAATGTTGTTTCTTTGAAGCATTGCTTCTTCTCTACAACAAGCAGAGATGAACTTTTCCTTAACCTGGTCATGGAATTTGTTCCTGAGTCACTGTATCGTGTGTTGAAGCATTATAGCAACATGAACCAAAGGATGCCACTTATATATGTCAAATTGTATGTTTACCAGATATTCCGTGGTTTGGCTTACATTCATACTGTACCTGGAGTTTGCCACAGGGATGTGAAGCCTCAGAATCTTTTGGTCGATCCTCTTACTCACCAAGTCAAAATATGTGATTTTGGGAGCGCAAAAATGTTGGTTAAAGGTGAAGCAAACATATCGTATATATGTTCACGTTATTACCGTGCTCCAGAACTGATATTTGGGGCAACCGAATACACG-ACATCAATTGATATATGGTCAGCTGGGTGTGTTCTTGCTGAGTTGCTCCTTGGCCAGCCTCTCTTTCCTGGTGAAAGTGCAGTGGATCAGCTTGTCGAGATTATAAAGGTTCTTGGTACTCCAACACGTGAGGAAATCCGCTGCATGAATCCCAACTACACAGAATTCAGATTTCCTCAGATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACCTTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTGCACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGACCATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCCGATGCTTGTTTGTGCCAAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGGGGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCAAGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATGCCCTATTGTCGATGTAATTGTGTAAATGTTCCTAATGGAAAAATCTCTTGTTATGATACCCCATGCCCAAACTTGTTTACCCCCCCCCCCCTACTGGTTTCCTCTACCATATGGTTCAGAGAACTTTCCTCATCTGTTGGCTGCAAAGATGAATGTTGTGATTATCATTGTCACTGGAATACTAGGATAAAATTGTTGATAAATGAGTAATATATTTGAGGTCTGCATTTGTGAGTTGTGTAAGGATTTAAGGCAGGTGTCTGCACCAATCCTATATTGAGAGAATAAAAGCAACA]

[+] EMBL AK073725             [TCTCATGGTCGCCTAGCCAAGCCAAGCCAAGCCAACCTCCTCGCCGAGGAGAGAGAAGAGAGGAGAGGAGACGAGAGGAGAGAGAAGCCGAGGAGGAGGAGAGAGAGAGAGAGGAGGCCGCTCCATTTGCCCCCCCCCCCATGGCCACGCTGCCGGGCGGGCCCCACCCCACCGGAGGCGGCGCCGCGGCGGACCCGATGCAGGTCGACCAGCCGCGCTCCGCCGCGGCCGCCGCAGCGGTCGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCGGCCACATAATCTCCACAACGATTGGAGGGAAGAATGGAGAACCTAAAAGGACGATTAGCTACATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGAATCGTCTTTCAGGCAAAATGTTTGGAGACTGGTGAGACTGTCGCCATTAAGAAGGTTTTACAGGACAAGCGTTACAAGAACAGGGAGTTGCAGATTATGCGATCAATGGATCATTGCAATGTTGTTTCTTTGAAGTATTGCTTCTTCTCTACAACAAGCAGAGATGAACTTTTCCTTAACCTGGTCATGGAATTTGTTCCTGAGTCACTGTATCGTGTGTTGAAGCATTATAGCAACATGAACCAAAGGATGCCACTTATATATGTCAAATTGTATGTTTACCAGATATTCCGTGGTTTGGCTTACATTCATACTGTACCTGGAGTTTGCCACAGGGATGTGAAGCCTCAGAATCTTTTGGTCGATCCTCTTACTCACCAAGTCAAAATATGTGATTTTGGGAGCGCAAAAATGTTGGTTAAAGGTGAAGCAAACATATCGTATATATGTTCACGTTATTACCGTGCTCCAGAACTGATATTTGGGGCAACCGAGTACACG ACATCAATTGATATATGGTCAGCTGGGTGTGTTCTTGCTGAGTTGCTCCTTGGCCAGCCTCTCTTTCCTGGTGAAAGTGCAGTGGATCAGCTTGTCGAGATTATAAAGGTTCTTGGTACTCCAACACGTGAGGAAATCCGCTGCATGAATCCCAACTACACAGAATTCAGATTTCCTCAGATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACCTTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTGCACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGACCATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCCGATGCTTGTTTGTGCCAAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGGGGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCAAGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATGCCCTATTGTCGATGTAATTGTGTAAATGTTCCTAATGGAAAAATCTCTTGTTATGATACCCCATGCCCAAACTTGTTTACCCCCCCCCCCCTACTGGTTTCCTCTACCATATGGTTCAGAGAACTTTCCTCATCTGTTGGCTGCAAAGATGAATGTTGTGATTATCATTGTCACTGGAATACTAGGATAAAATTGTTGATAAATGAGTAATATATTTGAGGTCTGCATTTGTGAGTTGTGTAAGGATTTAAGGCAGGTGTCTGCACCAATCCTATATTGAGAGAATAAAAGCAACA]
[+] EMBL CB662126             [                         GCCAAGCCAACCTCCTCGCCGAGGAGAGAGAAGAGAGGAGAGGAGACGAGAGGAGAGAGAAGCCGAGGAGGAGGAGAGAGAGAGAGAGGAGGCCGCTCCATTTGCCCCCCCCCCCATGGCCACGCTGCCGGGCGGGCCCCACCCCACCGGAGGCGGCGCCGCGGCGGACCCGATGCAGGTCGACCAGCCGCGCTCCGCCGCGGCCGCCGCAGCGGTCGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCGGCCACATAATCTCCACAACGATTGGAGGGAAGAATGGAGAACCTAAAAGGACGATTAGCTACATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGAATCGTCTTTCAGGCAAAATGTTTGGAGACTGGTGAGACTGTCGCCATTAAGAAGGTTTTACAGGACAAGCGTTACAAGAACAGGGAGTTGCAGATTATGCGATCAATGGATCATTGCAATGTTGTTTCTTTGAAGCATTGCTTCTTCTCTACAACAAGCAGAGATGAACTTTTCCTTAACCTGGTCATGGAATTTGTTCCTGAGTCACTGTATCGTGTGTTGAAGCATTATAGCAACATGAACCAAAGGATGCCACTTATATATGTCAGATTGTATGTTTACCAGATATTCCGTGGTTTGGCTTACATTCATACTGTACCTGGAGTTTGCCACAGGGATGTGAAGCCTCAGAATCTTTTGGTCGATCCTCTTACTCACCAAGTCAAAATATGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB636177             [                             AGCCAACCTCCTCGCCGAGGAGAGAGAAGAGAGGAGAGGAGACGAGAGGAGAGAGAAGCCGAGGAGGAGGAGAGAGAGAGAGAGGAGGCCGCTCCATTTGCCCCCCCCCCCATGGCCACGCTGCCGGGCGGGCCCCACCCCACCGGAGGCGGCGCCGTGGCGGACCCGATGCATGTCGACCAGCCGCGCTCCGCCGCGGTCGCCGCAGCGGTCGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCGGCCACATAATCTCCACAACGATTGGAGGGAACAATGGAGATCCTTAAATGACTATTTCCTTCATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGTATCTTCTTTCAGGCAATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BU673550             [                                                                                                                                                                                                                                                TCGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCGGCCACATAATCTCCACCACGATTGGAGGGAAGAATGGAGAACCTAAAAGGACGATTAGCTACATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGAATCGTCTTTCAGGCAAAATGTTTGGAGACTGGTGAGACTGTCGCCATTAAGAAGGTTTTACAGGACAAGCGTTACAAGAACAGGGAGTTGCAGATTATGCGATCAATGGATCATTGCAATGTTGTTTCTTTGAAGCATTGCTTCTTCTCTACAACAAGCAGAGATGAACTTTTCCTTAACCTGGTCATGGAATTTGTTCCTGAGTCACTGTATCGTGTGTTGAAGCATTATAGCAACATGAACCAAAGGATGCCACTTATATATGTCAAATTGTATGTTTACCAGATATTCCGTGGTTTGGCTTACATTCATACTGTACCTGGAGTTTGCCACAGGGATGTGAAGCCTCAGAATCTTTTGGTCGATCCTCTTACTCACCAAGTCAAAATATGTGATTTTGGGAGCGCAAAAATGTTGGTTACAGGTGAAGCAAACATATCGTATATATGTTCACGTTATTACCGTGCTCCAGAACTGATATTTGGGGCAACCGAATACACGAACATCCATTGATATATGGTCAGCTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI306125             [                                                                                                                                                                                                                                                 CGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCGGCCACATAATCTCCACCACGATTGGAGGGAAGAATGGAGAACCTAAAAGGACGATTAGCTACATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGAATCGTCTTTCAGGCAAAATGTTTGGAGACTGGTGAGACTGTCGCCATTAAGAAGGTTTTACAGGACAAGCGTTACAAGAACAGGGAGTTGCAGATTATGCGATCAATGGATCATTGCAATGTTGTTTCTTTGAAGCATTGCTTCTTCTCTACAACAAGCAGAGATGAACTTTTCCTTAACCTGGTCATGGAATTTGTTCCTGAGTCACTGTATCGTGTGTTGAAGCATTATAGCAACATGAACCAAAGGATGCCACTTATATATGTCAAATTGTATGTTTACCAGATATTCCGTGGTTTGGCTTACATTCATACTGTACCTGGAGTTTGCCACAGGGATGTGAAGCCTCAGAATCTTTTGGTCGATCCTCTTACTCACCAAGTCAAAATATGTGATTTTGGGAGCGCAAAAATGTTGGTTAAAGGTGAAGCAAACATATCGTATATATGTTCACGTTATTACCGTGCTCCAGAACTGATATTTGGGGCAACCGAATACACG ACATCAATTGATATATGGTCAGCTGGGTGTGTTCTTGCTGAGTTGCTCCTTGGCCAGCCTCTCTTTCCTGGTGAAAGTGCAGTGGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB662127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGAGATTATAAAGGTTCTTGGTACTCCAACACGTGAGGAAATCCGCTGCATGAATCCCAACTACACAGAATTCAGATTTCCTCAGATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACCTTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTGCACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGACCATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCCGATGCTTGTTTGTGCCAAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGGGGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCAAGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATGCCCTATTGTCGATGTAATTGTGTAAATGTTCCTAATGGAAAAATCTCT                                                                                                                                                                                                                                                        ]
[-] EMBL CB636178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGACCATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCCGATGCTTGTTTGTGCCAAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGGGGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCAAGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATGCCCTATTGTCGATGTAATTGTGTAAATGTTCCTAATGG AAAATCTtt                                                                                                                                                                                                                                                        ]


>consensus_11580#0 TCTCATGGTCGCCTAGCCAAGCCAAGCCAAGCCAACCTCCTCGCCGAGGAGAGAGAAGAG AGGAGAGGAGACGAGAGGAGAGAGAAGCCGAGGAGGAGGAGAGAGAGAGAGAGGAGGCCG CTCCATTTGCCCCCCCCCCCATGGCCACGCTGCCGGGCGGGCCCCACCCCACCGGAGGCG GCGCCGCGGCGGACCCGATGCAGGTCGACCAGCCGCGCTCCGCCGCGGCCGCCGCAGCGG TCGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCG GCCACATAATCTCCACAACGATTGGAGGGAAGAATGGAGAACCTAAAAGGACGATTAGCT ACATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGAATCGTCTTTCAGGCAAAATGTT TGGAGACTGGTGAGACTGTCGCCATTAAGAAGGTTTTACAGGACAAGCGTTACAAGAACA GGGAGTTGCAGATTATGCGATCAATGGATCATTGCAATGTTGTTTCTTTGAAGCATTGCT TCTTCTCTACAACAAGCAGAGATGAACTTTTCCTTAACCTGGTCATGGAATTTGTTCCTG AGTCACTGTATCGTGTGTTGAAGCATTATAGCAACATGAACCAAAGGATGCCACTTATAT ATGTCAAATTGTATGTTTACCAGATATTCCGTGGTTTGGCTTACATTCATACTGTACCTG GAGTTTGCCACAGGGATGTGAAGCCTCAGAATCTTTTGGTCGATCCTCTTACTCACCAAG TCAAAATATGTGATTTTGGGAGCGCAAAAATGTTGGTTAAAGGTGAAGCAAACATATCGT ATATATGTTCACGTTATTACCGTGCTCCAGAACTGATATTTGGGGCAACCGAATACACGA CATCAATTGATATATGGTCAGCTGGGTGTGTTCTTGCTGAGTTGCTCCTTGGCCAGCCTC TCTTTCCTGGTGAAAGTGCAGTGGATCAGCTTGTCGAGATTATAAAGGTTCTTGGTACTC CAACACGTGAGGAAATCCGCTGCATGAATCCCAACTACACAGAATTCAGATTTCCTCAGA TTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACC TTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTG CACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCAT TCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACA GGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGAC CATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCCGATGCTTGTTTGTGCCAAAGGG CAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACAT GAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAAT TTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGG GGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCA AGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATG CCCTATTGTCGATGTAATTGTGTAAATGTTCCTAATGGAAAAATCTCTTGTTATGATACC CCATGCCCAAACTTGTTTACCCCCCCCCCCCTACTGGTTTCCTCTACCATATGGTTCAGA GAACTTTCCTCATCTGTTGGCTGCAAAGATGAATGTTGTGATTATCATTGTCACTGGAAT ACTAGGATAAAATTGTTGATAAATGAGTAATATATTTGAGGTCTGCATTTGTGAGTTGTG TAAGGATTTAAGGCAGGTGTCTGCACCAATCCTATATTGAGAGAATAAAAGCAACA



consensusID : consensus_11580#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 750
fasta sequence
                              [ACAGAATTCAGATTTCCTCAGATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACCTTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTGCACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGACCATAGGACAGCTGGATGGTATTTTTACTTTGCGAA-GCCGATGCTTGTTTGTGCCAAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGGGGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCAAGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATGCCCTATTGTCGATGTAATTGTGTAAAGGTTCCTAATGGAAAAATCTCTTGTTATGATAAAAAAAAAGA]

[-] EMBL CB656786             [ACAGAATTCAGATTTCCTCAGATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACCTTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTGCACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGACCATAGGACAGCTGGATGGTATTTTTACTTTGCGAA GCCGATGCTTGTTTGTGCCAAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGGGGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCAAGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATGCCCTATTGTCGATGTAATTGTGTAAAGGTTCCTAATGGAAAAATCTCTTGTTATGATAAAAAAAAAGA]
[-] EMBL CA305607             [                   AGATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACCTTGCATCACGTCTTCTCCAGTATTCACCAAATCTACGATGCACTGCCCTCGAAGCATGTGCACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAGGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATATATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGCGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGACCATAGGACGGCTGGATTTTATTTTTACTTTGCGAAGGCCGATGCTTGTTTGTGCCGAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGGGGGTGTGCTAGGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGAT                                                                                                                                                                                                            ]


>consensus_11580#1 ACAGAATTCAGATTTCCTCAGATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGG ATGCCTCCAGAAGCAATTGACCTTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGA TGCACTGCCCTCGAAGCATGTGCACATTCATTCTTTGATGAATTGCGAGAACCCCACGCA AGGTTGCCAAATGGACGTCCATTCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAAT TTATCGCCAGAGCTCATCAACAGGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTC AATTTCTTGCCTGCTGCCGGACCATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCC GATGCTTGTTTGTGCCAAAGGGCAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGA CCATTATTGGGAAGCTGAACATGAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTA GGCACAGCCAACCCATGTTAATTTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGT CAGGATTAGCCAAGTACTGTGGGGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGC TATTGAAAGGGATCAGATCCCAAGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGT GCCCCTGTAAGTGTTTCTCATGCCCTATTGTCGATGTAATTGTGTAAAGGTTCCTAATGG AAAAATCTCTTGTTATGATAAAAAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11580#0      TCTCATGGTCGCCTAGCCAAGCCAAGCCAAGCCAACCTCCTCGCCGAGGAGAGAGAAGAG 60
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      AGGAGAGGAGACGAGAGGAGAGAGAAGCCGAGGAGGAGGAGAGAGAGAGAGAGGAGGCCG 120
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      CTCCATTTGCCCCCCCCCCCATGGCCACGCTGCCGGGCGGGCCCCACCCCACCGGAGGCG 180
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      GCGCCGCGGCGGACCCGATGCAGGTCGACCAGCCGCGCTCCGCCGCGGCCGCCGCAGCGG 240
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      TCGCCCCCGCCGGTGAAAAGCACGGTGCTTCTCTTATGGAAGGGAGTGATCCTGTCACCG 300
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      GCCACATAATCTCCACAACGATTGGAGGGAAGAATGGAGAACCTAAAAGGACGATTAGCT 360
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      ACATGGCAGAACGAGTTGTGGGAACTGGATCATTTGGAATCGTCTTTCAGGCAAAATGTT 420
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      TGGAGACTGGTGAGACTGTCGCCATTAAGAAGGTTTTACAGGACAAGCGTTACAAGAACA 480
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      GGGAGTTGCAGATTATGCGATCAATGGATCATTGCAATGTTGTTTCTTTGAAGCATTGCT 540
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      TCTTCTCTACAACAAGCAGAGATGAACTTTTCCTTAACCTGGTCATGGAATTTGTTCCTG 600
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      AGTCACTGTATCGTGTGTTGAAGCATTATAGCAACATGAACCAAAGGATGCCACTTATAT 660
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      ATGTCAAATTGTATGTTTACCAGATATTCCGTGGTTTGGCTTACATTCATACTGTACCTG 720
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      GAGTTTGCCACAGGGATGTGAAGCCTCAGAATCTTTTGGTCGATCCTCTTACTCACCAAG 780
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      TCAAAATATGTGATTTTGGGAGCGCAAAAATGTTGGTTAAAGGTGAAGCAAACATATCGT 840
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      ATATATGTTCACGTTATTACCGTGCTCCAGAACTGATATTTGGGGCAACCGAATACACGA 900
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      CATCAATTGATATATGGTCAGCTGGGTGTGTTCTTGCTGAGTTGCTCCTTGGCCAGCCTC 960
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      TCTTTCCTGGTGAAAGTGCAGTGGATCAGCTTGTCGAGATTATAAAGGTTCTTGGTACTC 1020
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      CAACACGTGAGGAAATCCGCTGCATGAATCCCAACTACACAGAATTCAGATTTCCTCAGA 1080
consensus_11580#1      --------------------------------------ACAGAATTCAGATTTCCTCAGA 22
                                                             **********************

consensus_11580#0      TTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACC 1140
consensus_11580#1      TTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGGATGCCTCCAGAAGCAATTGACC 82
                       ************************************************************

consensus_11580#0      TTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTG 1200
consensus_11580#1      TTGCATCACGTCTTCTCCAGTATGCACCAAATCTACGATGCACTGCCCTCGAAGCATGTG 142
                       ************************************************************

consensus_11580#0      CACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCAT 1260
consensus_11580#1      CACATTCATTCTTTGATGAATTGCGAGAACCCCACGCAAGGTTGCCAAATGGACGTCCAT 202
                       ************************************************************

consensus_11580#0      TCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACA 1320
consensus_11580#1      TCCCCCCACTGTTCAACTTTAAGCAAGAACTAGCGAATTTATCGCCAGAGCTCATCAACA 262
                       ************************************************************

consensus_11580#0      GGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGAC 1380
consensus_11580#1      GGTTGATACCAGAGCATGCTCGGTGACATTGTGGGTTCAATTTCTTGCCTGCTGCCGGAC 322
                       ************************************************************

consensus_11580#0      CATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCCGATGCTTGTTTGTGCCAAAGGG 1440
consensus_11580#1      CATAGGACAGCTGGATGGTATTTTTACTTTGCGAAGCCGATGCTTGTTTGTGCCAAAGGG 382
                       ************************************************************

consensus_11580#0      CAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACAT 1500
consensus_11580#1      CAACTTGCATGTTCTCACATTTAAGGTGTAGAATCTGACCATTATTGGGAAGCTGAACAT 442
                       ************************************************************

consensus_11580#0      GAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAAT 1560
consensus_11580#1      GAGCTGGCGCCAATGTGTTATATGAGGTGGGTGTGCTAGGCACAGCCAACCCATGTTAAT 502
                       ************************************************************

consensus_11580#0      TTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGG 1620
consensus_11580#1      TTAATGCTTCTCCTCCATTATTAGGAGGCCATGGTGGTCAGGATTAGCCAAGTACTGTGG 562
                       ************************************************************

consensus_11580#0      GGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCA 1680
consensus_11580#1      GGATAGCTGGAGGGAATGGGGATGGTGTATTGTTAAGCTATTGAAAGGGATCAGATCCCA 622
                       ************************************************************

consensus_11580#0      AGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATG 1740
consensus_11580#1      AGTACTGTACTACTTTCTCCCACGATTAATGTTGTAGTGCCCCTGTAAGTGTTTCTCATG 682
                       ************************************************************

consensus_11580#0      CCCTATTGTCGATGTAATTGTGTAAATGTTCCTAATGGAAAAATCTCTTGTTATGATACC 1800
consensus_11580#1      CCCTATTGTCGATGTAATTGTGTAAAGGTTCCTAATGGAAAAATCTCTTGTTATGATAAA 742
                       ************************** *******************************  

consensus_11580#0      CCATGCCCAAACTTGTTTACCCCCCCCCCCCTACTGGTTTCCTCTACCATATGGTTCAGA 1860
consensus_11580#1      AAAAAAGA---------------------------------------------------- 750
                         *                                                         

consensus_11580#0      GAACTTTCCTCATCTGTTGGCTGCAAAGATGAATGTTGTGATTATCATTGTCACTGGAAT 1920
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      ACTAGGATAAAATTGTTGATAAATGAGTAATATATTTGAGGTCTGCATTTGTGAGTTGTG 1980
consensus_11580#1      ------------------------------------------------------------
                                                                                   

consensus_11580#0      TAAGGATTTAAGGCAGGTGTCTGCACCAATCCTATATTGAGAGAATAAAAGCAACA 2036
consensus_11580#1      --------------------------------------------------------
                                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)