These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11582#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1333 fasta sequence [GGACAGCACAGGTCGAGACTCGAGAGGCGGCGAGACCGAGCGGGGACGCCATGG-ATCGCGAGTGGGGCTCCAAGCCCGGCAGCGGCGGCGCCGCCTCCGCCCAGAATGAGGCCATCGACCGGCGGGAGCGCCTCCGCCGCCTCGCCCTCGAGACCATCGACCTCGCCAAGGACCCCTACTTCATGCGCAACCACCTCGGCAGCTACGAGTGCAAGCTGTGCCTGACGCTGCACAACAACGAGGGGAACTACCTGGCTCACACGCAGGGGAAGCGGCACCAGACCAACCTCGCCAAGCGTGCCGCCCGCGAGGCCAAGGACGCGCCCGCGCAGCCCCAGCCCAACAAGAGAAAGTTCGCGCCCCGCAAGTCCGTTAAGATTGGAAGACCTGGGTATCAGGTGACTAAGCAGTATGATCCTGACATGAAGCAACACTCATTTCTTTTTGAGATTGGTTATCCTGAAATTGAAGAAAACAGCAAGCCAAGGCACCGTTTCATGGCATCATATGAACAGAAAGTCGAATCTTGGGATAAAAAGTATCAATATCTACTTTTTGCAGCAGAGCCCTATGAAATTATTGGCTTTAAGATACCAAGCGCAGAGATCGACAAGTCAGCAGATAAATTCTTCAACTATTGGGATCCAGACAAGAAACAGTACATTCTCCAACTATACTTCAAAACAAGACAACCAGAAGCTAATAAGCCGCCTGCGGCTCCTGGGACTTTGCCAAATGGATCTGGAGGTCCACCACGCCCACCCCCACCGCAGGTTCCGCCACCCCCGCCACAGGCTCCGCCGCCGCCTCCACCAAATGCACCTATGGGTATGCCCCCAAGGATCCCACCCCCACCTGTTGGTGGTACTCAACCTCCACCACCACCGCCCCCACTTGCAAATGGACCTCCACGATCAATCCCACCCCCACCTATGACCGGTGGTGCAATGGCTAACTTCACTCCTGGAGCACCTCCTCGTCCTCCAATGCAAGGATTTCCTGGGCCGCAGCAGTAGATGACCCAAGCGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTACATGTACTCTTAGACTATAGTATTGTCGAT--TTTAAGAAATTTTCCA-CCTTGATACTTTTGATACTTCTATTCAAAGCACTTGGTGTCTAAAAAGCTTGCACACATGGTTCTGGTATTGTCTGACGTGACGGTGTGTGCCCGTGAGCACCGAGCTGGGTGCTATGCCAATGCCGACCCAANCCATACAACATCGATGAAAAAA] [+] EMBL AK106060 [GGACAGCACAGGTCGAGACTCGAGAGGCGGCGAGACCGAGCGGGGACGCCATGG ATCGCGAGTGGGGCTCCAAGCCCGGCAGCGGCGGCGCCGCCTCCGCCCAGAATGAGGCCATCGACCGGCGGGAGCGCCTCCGCCGCCTCGCCCTCGAGACCATCGACCTCGCCAAGGACCCCTACTTCATGCGCAACCACCTCGGCAGCTACGAGTGCAAGCTGTGCCTGACGCTGCACAACAACGAGGGGAACTACCTGGCTCACACGCAGGGGAAGCGGCACCAGACCAACCTCGCCAAGCGTGCCGCCCGCGAGGCCAAGGACGCGCCCGCGCAGCCCCAGCCCAACAAGAGAAAGTTCGCGCCCCGCAAGTCCGTTAAGATTGGAAGACCTGGGTATCAGGTGACTAAGCAGTATGATCCTGACATGAAGCAACACTCATTTCTTTTTGAGATTGGTTATCCTGAAATTGAAGAAAACAGCAAGCCAAGGCACCGTTTCATGGCATCATATGAACAGAAAGTCGAATCTTGGGATAAAAAGTATCAATATCTACTTTTTGCAGCAGAGCCCTATGAAATTATTGGCTTTAAGATACCAAGCGCAGAGATCGACAAGTCAGCAGATAAATTCTTCAACTATTGGGATCCAGACAAGAAACAGTACATTCTCCAACTATACTTCAAAACAAGACAACCAGAAGCTAATAAGCCGCCTGCGGCTCCTGGGACTTTGCCAAATGGATCTGGAGGTCCACCACGCCCACCCCCACCGCAGGTTCCGCCACCCCCGCCACAGGCTCCGCCGCCGCCTCCACCAAATGCACCTATGGGTATGCCCCCAAGGATCCCACCCCCACCTGTTGGTGGTACTCAACCTCCACCACCACCGCCCCCACTTGCAAATGGACCTCCACGATCAATCCCACCCCCACCTATGACCGGTGGTGCAATGGCTAACTTCACTCCTGGAGCACCTCCTCGTCCTCCAATGCAAGGATTTCCTGGGCCGCAGCAGTAGATGACCCAAGCGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTACATGTACTCTTAGACTATAGTATTGTCGAT TTTAAGAAATTTTCCA CCTTGATACTTTTGATACTTCTATTCAAAGCA ] [+] EMBL AU183935 [ CGAGCGGGGACGCCATGGNATCGCGAGTGGGGCTCCAAGCCCGGCAGCGGCGGCGCCGCCTCCGCCCAGAATGAGGCCATCGACCGGCGGGAGCGCCTCCGCCGCCTCGCCCTCGAGA NTTTNACCTCGCCAAGGACCCCTACTTCATGCGCAACCACCTCGGCAGCTACGAGTGCAAGCTGTGCCTGACGCTGCACAACAACGAGGGGAACTACCTGGCTCACACGCAGGGGAAGCGGCACCAGACCAACCTCGCCAAGCGTGCCGCCCGCGAGGCCAAGGACGCGCCCGCGCAGCCCCAGCCCAACAAGAGAAAGTTCGCGCCCCGCAAGTCCGTTAAGATTGGAAGACCTGGGTATCAGGTGACTAAGCAGTATGATCCTGACATGAAGCAACACTCATTTCTTTTTGAGATTGGTTATCCTGAAATTGAAGAAAACAGCAAGC ] [+] EMBL AU173051 [ GAGCGGGGACGCCATGG ATCGCGAGTGGGGCTCCAAGCCCGGCAGCGGCGGCGCCGCCTCCGCCCAGAATGAGGCCATCGACCGGCGGGAGCGCCTCCGCCGCCTCGCCCTCGAGACCATCGACCTCGCCAAGGACCCCTACTTCATGCGCAACCACCTCGGCAGCTACGAGTGCAAGCTGTGCCTGACGCTGCACAACAACGAGGGGAACTACCTGGCTCACACGCAGGGGAAGCGGCACCAGACCAACCTCGCCAAGCGTGCCGCCCGCGAGGCCAAGGACGCGCCCGCGCAGCCCCAGCCCAACAAGAGAAAGTTCGCGCCCCGCAAGTCCGTTAAGATTGGAAGACCTGGGTATCAGGTGACTAAGCAGTATGATCCTGACATGAAGCAACACTCATTTCTTTTTGAGATTGGTTATCCTG ] [-] EMBL CB654116 [ CCTGACATGAAGCAACACTCATTTCTTTTTGAGATTGGTTATCCTGAAATTGAAGAAAACAGCAAGCCAAGGCACCGTTTCATGGCATCATATGAACAGAAAGTCGAATCTTGGGATAAAAAGTATCAATATCTACTTTTTGCAGCAGAGCCCTATGAAATTATTGGCTTTAAGATACCAAGCGCAGAGATCGACAAGTCAGCAGATAAATTCTTCAACTATTGGGATCCAGACAAGAAACAGTACATTCTCCAACTATACTTCAAAACAAGACAACCAGAAGCTAATAAGCCGCCTGCGGCTCCTGGGACTTTGCCAAATGGATCTGGAGGTCCACCACGCCCACCCCCACCGCAGGTTCCGCCACCCCCGCCACAGGCTCCGCCGCCGCCTCCACCAAATGCACCTATGGGTATGCCCCCAAGGATCCCACCCCCACCTGTTGGTGGTACTCAACCTCCACCACCACCGCCCCCACTTGCAAATGGACCTCCACGATCAATCCCACCCCCACCTATGACCGGTGGTGCAATGGCTAACTTCACTCCTGGAGCACCTCCTCGTCCTCCAATGCAAGGATTTCCTGGGCCGCAGCAGTAGATGACCCAAGCGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTACATGTACTCTTAGACTATAGTATTGTCGAT TTTAAGAAATTTTCCA CCTTGATACTTTTGATACTTCTATTCAAAGCACTTGGTGTCTA ] [+] EMBL AU183936 [ CCGCCGCCTCCACCAAATGCACCTATGGGTATGCCCCCAAGGATCCCACCCCCACCTGTTGGTGGTACTCAACCTCCACCACCACCGCCCCCACTTGCAAATGGACCTCCACGATCAATCCCACCCCCACCTATGACCGGTGGTGCAATGGCTAACTTCACTCCTGGAGCACCTCCTCGTCCTCCAATGCAAGGATTTCCTGGGCCGCAGCAGTAGATGACCCAAGCGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTACATGTACTCTTAGACTATAGTATTGTCGAT TTTAAGAAATTTTCCA CCTTGATACTTTTGATACTTCTATTCAAAGCACTTGGTGTCTAAAAA ] [+] EMBL AU173052 [ AGGATCCNNCCCCCACCTGTTGGTGGTA TCAACCTCCACCACCACCGCCCCCACTTGCAAATGGACCTCCACGATCAATCCCACCCCCACCTATGACCGGTGGTGCAATGGCTAACTTCACTCCTGGAGCACCTCCTCGTCCTCCAATGCAAGGATTTCCTGGGCCGCAGCAGTAGATGACCCAAGCGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTACATGTACTCTTAGACTATAGTATTGTCGAT TTTAAGAAATTTTCCA CCTTGATACTTTTGATACTTCTATTCAAAGCACTTGGTGTCTAAAAA ] [+] EMBL BQ906457 [ ccgCTCCAATGCAAGGATTTCCT GGCCGCAGCAGTAGATGACCCAAGCGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATA TTACATGTACTCTTAGACTATAGTATCCTCGATNNCTTAAGAAATTTTCCA CCTGGATACTTTGGATACTTCTATTCAAAGCACTTGGTGTCTATNGCGCTTGCACACATGGTTCTGGTATTGTCTGACGTGACGGTGTGTGCCCGTGAGCACCGAGCTGGGTGCTATGCCAATGCCGACCCAANCCATACAACATCGATGAAAAAA] [+] EMBL CF318985 [ CGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTACATGTACTCTTAGACTATAGTATTGTCGAT TTTAAGAAATTTTCCA CCTTGATACTTTTGATACTTCaaaaaaaa ] [-] EMBL CF318986 [ GACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTAGTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTACATGTACTCTTAGACTATAGTATTGTCGAT TTTAAGAAATTTTCCACCCTTGATACTTTTGATACTTCaaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||