cluster # 11591

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Oryza sativa
cluster # 11591 cluster # 11591 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11591#0 length = 655 sequences # 9
consensusID : consensus_11591#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 655
fasta sequence
                              [TTTTTTTTAAATATTAAACTGAATTATTGGACTAATTTCGTAATGAGCCACTATTGAAGGTACAAAATACATATACATAGGAAATAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG-CACATCGATTAA-CCCA-TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC-CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG-CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCAGTCCAGTGCAGTGT]

[+] EMBL CF313106             [TTTTTTTTAAATATTAAACTGAATTATTGGACTAATTTCGTAATGAGCCACTATTGAAGGTACAAAATACATATACATAGGAAATAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAACAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTC                                                                                                                                                                                                    ]
[+] EMBL CF311169             [                                                                     ttttttttTAGGAAATAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGCCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCC                  ]
[-] EMBL CF316082             [                                                                                ttttTAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAGCCACATCGATTAACCCCATTCA ACACACACA ACACCCCATATATATTGGTCAAGCACCAACCNCAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTC                   ]
[+] EMBL CF319334             [                                                                              ttttttTAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTc                         ]
[-] EMBL CF321666             [                                                                                                              CATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATA ATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCAGTCCAGTGCAGTGT]
[-] EMBL CF278120             [                                                                                                                                                                                                       CACACACACACACCCCATA ATATTGGTCAAGCACCAACC CAAATGGCCGAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCA              ]
[-] EMBL CF313085             [                                                                                                                                                                                                                                                            CTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTGNCGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCA              ]
[-] EMBL AU096733             [                                                                                                                                                                                                                                                                                                                                                                                                                      TG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCA GAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATgcatagcc                    ]
[-] EMBL AU065867             [                                                                                                                                                                                                                                                                                                                                                                                                                       G CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATgcatagc                     ]




>consensus_11591#0
TTTTTTTTAAATATTAAACTGAATTATTGGACTAATTTCGTAATGAGCCACTATTGAAGG
TACAAAATACATATACATAGGAAATAATAGCCAAACCAGTTTAATATATTCATCACTTCA
TCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAGCACAT
CGATTAACCCATCACACACACACACACACCCCATATATATTGGTCAAGCACCAACCCAAA
TGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGA
TGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAG
CCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTGCGCCTTCTTCTCCGGC
GCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTAC
TTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATC
TTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAG
AAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCAGTCCAGTGCAGTGT
clustalw multiple alignements is not computed in this case