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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11594#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1751 fasta sequence
[ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT-GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTAGAAAGGCCTCTCCAGCGTGAGAAACTATACAAAGGAAAGGATGGTTTTGTTGCCGCTGGTTCCACTACTTCAGAAGTTCGTGGTGCTGTGGCTTGGGTTCCCATACTGTGGTTCCAGCAGGCAGAAGACCGCATGCATCTCTGTGTTTATCAGCACAAGAACATAACCATTCTGCTACTGATTCCAGCTTCATCTCTAATAAATGGAGATGATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATGTTTCAATTCAGTTTGTTGTTGT]
[+] EMBL AK066491 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAGGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTAGAAAGGCCTCTCCAGCGTGAGAAACTATACAAAGGAAAGGATGGTTTTGTTGCCGCTGGTTCCACTACTTCAGAAGTTCGTGGTGCTGTGGCTTGGGTTCCCATACTGTGGTTCCAGCAGGCAGAAGACCGCATGCATCTCTGTGTTTATCAGCACAAGAACATAACCATTCTGCTACTGATTCCAGCTTCATCTCTAATAAATGGAGATGATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTC ]
[+] EMBL CB658967 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTA ]
[+] EMBL CB626133 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGG ]
[+] EMBL CB630231 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGTNGCC ATCACTTGTATTATTTGAAAATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACT ]
[+] EMBL AK061889 [ TACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTAGAAAGGCCTCTCCAGCGTGAGAAACTATACAAAGGAAAGGATGGTTTTGTTGCCGCTGGTTCCACTACTTCAGAAGTTCGTGGTGCTGTGGCTTGGGTTCCCATACTGTGGTTCCAGCAGGCAGAAGACCGCATGCATCTCTGTGTTTATCAGCACAAGAACATAACCATTCTGCTACTGATTCCAGCTTCATCTCTAATAAATGGAGATGATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTCGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTGCAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATGTTTCAATTCA ]
[-] EMBL CB658968 [ ATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATG ]
[-] EMBL CB626134 [ ATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATG ]
[-] EMBL CB630232 [ CACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCCGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAGACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTATTTCATTCGATTGCTTCGATATCTATGTTTCAATTCAGTTTGTTGTTGT]
[+] EMBL AU166942 [ AACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATGTTTCAATTCAaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||