|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11599#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2067 fasta sequence
[TTGCAGTTACAACCGGCAAACCTCTCGCGACCCTGCACCGTAGCAGCGTCGACGCGAGGCGGACAGCCTCTTCTTCCTCCTCCCTTTCCACCCCCCACAGAGATCTCGCCTCTCTCCTCCTCCCTTTCCCTCTCCTTCCTTCCAGATCTCTCCACGCGCCGCCCCGATCTCTTCCCCCCACCCCCACCTCGTCACCGGCGGGGAGGAGGGCCCGGCCGCCGGCAGCCATGATCTCCTCCAGTAAGCTCAAGTCCGTCGACTTCTACAGGAAAATTCCTAGGGATTTGACCGAGGCATCACTATCTGGGGCTGGATTGTCCATTGTAGCAGCACTAGCTATGGTGTTTTTGTTTGGAATGGAACTGAGTAATTACTTAGCAGTCAATACTAGCACATCTGTGATTGTTGATAGGAGTTCAGATGGGGAGTTCTTACGGATAGATTTTAACTTAAGCTTTCCTGCGCTTTCATGCGAATTTGCATCAGTTGATGTCAGTGATGTTCTGGGAACAAACAGATTGAACATAACGAAAACTGTTCGCAAATATTCAATTGATCGGAATTTAGTGCCTACTGGATCCGAGTTCCACCCAGGACCTATTCCTACGGTCAGCAAACATGGAGATGATGTTGAAGAAAACCATGATGATGGTTCAGTTCCCTTGTCCTCTCGCAATTTTGATAGCTATTCACACCAGTATCCTGTTTTGGTTGTTAATTTTTATGCCCCCTGGTGTTACTGGAGCAATCGATTGAAACCTTCGTGGGAGAAGACTGCAAAAATAATGAGGGAGAGATATGATCCTGAAATGGATGGCAGAATCATTCTTGCCAAGGTTGACTGCACTGAAGAAATTGACTTGTGTAGGAGGCACCATATACAAGGTTATCCATCCATTCGCATTTTCCGTAAAGGGAGTGATCTTAAGGAAAACCAGGGTCACCATGATCATGAATCATACTACGGCGATCGTGATACTGAGAGTTTAGTAGCGGCAATGGAAACTTATGTTGCAAACATCCCAAAAGATGCCCATGTTCTAGCTTTGGAGGACAAATCCAATAAGACTGTTGATCCTGCAAAACGCCCTGCTCCATTGACCAGTGGATGCAGAATAGAAGGTTTTGTGCGGGTAAAAAAGGTCCCTGGGAGTGTTGTAATCTCAGCTCGATCTGGTTCCCACTCCTTTGATCCATCCCAGATAAATGTTTCCCACTATGTAACACAGTTCTCTTTTGGCAAAAGGCTATCGGCAAAGATGTTTAATGAACTGAAAAGACTAACTCCCTATGTTGGTGGCCACCATGATAGATTAGCTGGTCAATCCTACATTGTTAAGCATGGTGATGTCAATGCCAACGTTACTATTGAGCATTACCTGCAAATTGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTTGAGGAGTATGAATACACAGCGC-ACAGCAGCTTGGTGCACAGCTT-CTATGTTCCTGTT-GTGAAATTCCATT--TTGAACCTTCT-CCCATGCAGGTCTT-GGT-AACTGAACTTCCAAAATCCTT-CTCC--CATTTCATCACAAATGTTTGTGCTAT-CATTGGAGGAGTTT-TCACGGTTGCTGGAATACT-GGATTCCATCT-TCCACAAC-ACCTTGCGGCT-GGTTAAGAA-GGTCGAGCTTGGGAAGAACATTT-GAACAACAAGATTAATCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTAT-TTTGTTATACCA-GGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGG-TAGTGGGTTGGCAGAGGAGGAGAAG-TTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTC-GTAAGAACAATAATACAGTGGATCCTTGTTAACTATACCCTACG-TTAATTCGTCCAGACTATGTGTTGTGTTACTCTGTTTACTGTTGTGATGGCACATGTCATTACTCGTTACTCTGGATTTGTCTTCCGTCTCAAAATTTATTTACGGTAACCAGAATTTTTAAGTTCAAAAAAAAAAAAAA]
[+] EMBL AK099660 [TTGCAGTTACAACCGGCAAACCTCTCGCGACCCTGCACCGTAGCAGCGTCGACGCGAGGCGGACAGCCTCTTCTTCCTCCTCCCTTTCCACCCCCCACAGAGATCTCGCCTCTCTCCTCCTCCCTTTCCCTCTCCTTCCTTCCAGATCTCTCCACGCGCCGCCCCGATCTCTTCCCCCCACCCCCACCTCGTCACCGGCGGGGAGGAGGGCCCGGCCGCCGGCAGCCATGATCTCCTCCAGTAAGCTCAAGTCCGTCGACTTCTACAGGAAAATTCCTAGGGATTTGACCGAGGCATCACTATCTGGGGCTGGATTGTCCATTGTAGCAGCACTAGCTATGGTGTTTTTGTTTGGAATGGAACTGAGTAATTACTTAGCAGTCAATACTAGCACATCTGTGATTGTTGATAGGAGTTCAGATGGGGAGTTCTTACGGATAGATTTTAACTTAAGCTTTCCTGCGCTTTCATGCGAATTTGCATCAGTTGATGTCAGTGATGTTCTGGGAACAAACAGATTGAACATAACGAAAACTGTTCGCAAATATTCAATTGATCGGAATTTAGTGCCTACTGGATCCGAGTTCCACCCAGGACCTATTCCTACGGTCAGCAAACATGGAGATGATGTTGAAGAAAACCATGATGATGGTTCAGTTCCCTTGTCCTCTCGCAATTTTGATAGCTATTCACACCAGTATCCTGTTTTGGTTGTTAATTTTTATGCCCCCTGGTGTTACTGGAGCAATCGATTGAAACCTTCGTGGGAGAAGACTGCAAAAATAATGAGGGAGAGATATGATCCTGAAATGGATGGCAGAATCATTCTTGCCAAGGTTGACTGCACTGAAGAAATTGACTTGTGTAGGAGGCACCATATACAAGGTTATCCATCCATTCGCATTTTCCGTAAAGGGAGTGATCTTAAGGAAAACCAGGGTCACCATGATCATGAATCATACTACGGCGATCGTGATACTGAGAGTTTAGTAGCGGCAATGGAAACTTATGTTGCAAACATCCCAAAAGATGCCCATGTTCTAGCTTTGGAGGACAAATCCAATAAGACTGTTGATCCTGCAAAACGCCCTGCTCCATTGACCAGTGGATGCAGAATAGAAGGTTTTGTGCGGGTAAAAAAGGTCCCTGGGAGTGTTGTAATCTCAGCTCGATCTGGTTCCCACTCCTTTGATCCATCCCAGATAAATGTTTCCCACTATGTAACACAGTTCTCTTTTGGCAAAAGGCTATCGGCAAAGATGTTTAATGAACTGAAAAGACTAACTCCCTATGTTGGTGGCCACCATGATAGATTAGCTGGTCAATCCTACATTGTTAAGCATGGTGATGTCAATGCCAACGTTACTATTGAGCATTACCTGCAAATTGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTTGAGGAGTATGAATACACAGCGC ACAGCAGCTTGGTGCACAGCTT CTATGTTCCTGTT GTGAAATTCCATT TTGAACCTTCT CCCATGCAGGTCTT GGT AACTGAACTTCCAAAATCCTT CTCC CATTTCATCACAAATGTTTGTGCTAT CATTGGAGGAGTTT TCACGGTTGCTGGAATACT GGATTCCATCT TCCACAAC ACCTTGCGGCT GGTTAAGAA GGTCGAGCTTGGGAAGAACATTT GAACAACAAGATTATTCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTAT TTTGTTATACCA GGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGG TAGTGGGTTGGCAGAGGAGGAGAAG TTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTC GTAAGAACAATAAGACAGTGGATCCTTGTTAACTATACCCTACG T ]
[+] EMBL D43363 [ CCTTCCAGATCTCTCCACGCGCCGCCCCGATCTCTTCCCCCCACCCCCACCTCGTCACCGGCGGGGAGGAGGGCCCGGCCGCCGGCAGCCATGATCTCCTCCAGTAAGCTCAAGTCCGTCGACTTCTACAGGAAAATTCCTAGGGATTTGACCGAGGCATCACTATCTGGGGCTGGATTGTCCATTGTAGCAGCACTAGCTATGGTGTTTTTGTTTGGAATGGAACTGAGTAATTACTTAGCAGTCAATACTAG ]
[+] EMBL OS0451A [ TCAATGCCAACGTTACTATTGAGCATTACCTGCAAATTGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTTGAGGAGTATGAATACACAGCGC ACAGCAGCTTGGTGCACAGCTT CTATGTTCCTGTT GTGAAATTCCATT TTGAACCTTCT CCCATGCAGGTCTT GGT AACTGAACTTCCAAAATCCTT CTCC CATTTCATCACAAATGTTTGTGCTAT CATTGGAGGAGTTT TCACGGTTGCTGGAATACTGGGATTCCATCT TNCACAACAACTTTGCGGCT GGTTAAGAAGGGTCGAGCTTGGGAAGGNCATTT GAACAACAn ]
[-] EMBL CA762618 [ TGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTTGAGGAGTATGAATACACAGCGC ACAGCAGCTTGGTGCACAGNTT CTATGTTCCTGTT GTGAAATTCCATT TTGAACCTTCT CCCATGCAGGTCTT GGT AACTGAACTTCCAAAATCCTT CTCT CATTTCATCACAAATGTTTGTGCTAT CATTGGAGGAGTTT TCACGGTTGCTGGAATACT GGATTCCATCT TCCACAAC ACCTTGCGGCT GGTTAAGAA GGTCGAGCTTGGGAAGAACATTT GAACAACAAAATTAATCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTAT TTTGTTATACCA GGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGG TAGTGGGTTGGCAGAGGAGGAGAAG TTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTT GTAAGAACAATAATACAGTGGATCCTTGTTAACTATACCCTACG TTAATTCGTCCAGACTATGTGTTGTGTTACTCTGTTTACTGTTGTGATGGCACATGTCATTACTCGTTACTCTGGATTTGTCTTCCGTCTCAAAATTTATTTACGGTAACCAGAATTTTTAAGTTCAAAAAAAAAAAAAA]
[+] EMBL BQ906624 [ GAATACACAGCGCAACAGCAGCTTGGTGCACAGCTTGCTATGTTCCTGTTCGTGAAATTCCATTCGTGGAACCTTCTGCCCATGCAGGTCTTGGGTGAACTGAACTTCCCAAATCCTTGCTGCTGCATTTCATCACAAATGTTTGTGCTATGCATTGGAGGAGTTTGTCACGGTTGCTGGAATACT GGATTCCATCTGTCCACAAC ACCTTGCGGCTAGGTTAAGAA GGTCGAGCTTGGGAAGAACATTTGGAACAACAA ATTAATCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTATCTTTGTTATACCACGGGTAGGAATTCNTAATATATCAAGATGTGAAAGAGGGCTAGTGGGTTGGCAGAGGAGGAGAAGCTTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTCTGTAAGAAC ATAATACAGTGGATCCTTGTTAACTATACCCTACGNNTAATTCGTCCAGACTATGTGTTGTGTTAaaaa ]
consensusID : consensus_11599#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 698 fasta sequence
[TTCCNNCTCACCTTAGGGCCAATTGGGTCCCGGCCCCCCCTCGAGTCGACCCACGCNTCCNATGGTGATNCCAATCCCAACGTTACTATTGAGCATTNCCNGCAAATTGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTTGAGGAGTATGAATCCACAGCNCACANCAGCTTGGTGCACAGCTTCTATGTNCCTGTTGTGAAATNCCATTTTGAACCTTCTCCCATGCAGGTCTTGGTAACTGAACTTCCAAAANCCTTCTCCCATTTCATCACAAATGTTTGTNCTATCATTGGAGGNGTTTTCNCGGTTNCTGGAATACTGGATTCCATCTTCCACAACNCCTTGCGGCTGGTTAAGAAGGTCGAGCTTGGGAAGAACATTTGAACAACAAGATTATTCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTATTTTGTTATACCNGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGGTAGTGGGTTGGCAGAGGAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTCGTAAGAACAATAAGACAGTGGATCCTTGTTAACTATACCCTACGTTAATTCGTCCAGACTTGTGTTGTGTTAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C98047 [TTCCNNCTCACCTTAGGGCCAATTGGGTCCCGGCCCCCCCTCGAGTCGACCCACGCNTCCNATGGTGATNCCAATCCCAACGTTACTATTGAGCATTNCCNGCAAATTGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTTGAGGAGTATGAATCCACAGCNCACANCAGCTTGGTGCACAGCTTCTATGTNCCTGTTGTGAAATNCCATTTTGAACCTTCTCCCATGCAGGTCTTGGTAACTGAACTTCCAAAANCCTTCTCCCATTTCATCACAAATGTTTGTNCTATCATTGGAGGNGTTTTCNCGGTTNCTGGAATACTGGATTCCATCTTCCACAACNCCTTGCGGCTGGTTAAGAAGGTCGAGCTTGGGAAGAACATTTGAACAACAAGATTATTCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTATTTTGTTATACCNGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGGTAGTGGGTTGGCAGAGGAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTCGTAAGAACAATAAGACAGTGGATCCTTGTTAACTATACCCTACGTTAATTCGTCCAGACTTGTGTTGTGTTAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB964588 [ AAGATGTGAAAGAGGGTAGTGGGTTGGCA GAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTCGTAAGAACANTAAGACAGTGGATCCTTGTTAACTATACCCTACGTT ]
consensusID : consensus_11599#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence
[AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTGCGGCCGCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTATTTTGTTATACCAGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGGTAGTGGGTTGGCAGAGGAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTCGTAAAAACAATAAGACAGTGGATCCTTGTTAACTATACCCTACGTTAATTCGTCCAGACTTGTGTTGTGTTACTCTGTTTACTGTTGTGATGGCACCTGTCATTACTCGTTACTCTGGATTTGTCTTCCGTCTCAAAATTCATCTACGGTAACCAGAATTTTTAAGTTCGCTTAAAAAAAAAAAAAAAAAAAAAAGCTTGCGGGCCGCCACCGCGGGG]
[-] EMBL OSA420730 [AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTGCGGCCGCAAGCTTAGTGGTTGCACTAGTTTTAGTCATTATTTTGTTATACCAGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGGTAGTGGGTTGGCAGAGGAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGACCTCACTGTTTTGCTAAACGACTTCGTAAAAACAATAAGACAGTGGATCCTTGTTAACTATACCCTACGTTAATTCGTCCAGACTTGTGTTGTGTTACTCTGTTTACTGTTGTGATGGCACCTGTCATTACTCGTTACTCTGGATTTGTCTTCCGTCTCAAAATTCATCTACGGTAACCAGAATTTTTAAGTTCGCTTAAAAAAAAAAAAAAAAAAAAAAGCTTGCGGGCCGCCACCGCGGGG]
consensusID : consensus_11599#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 261 fasta sequence
[CGCTGTTAAGAAGTTCGAGCTTGGGAAGAACATTGGAACCAAATTAATCTTCAGAACCACCTCAAGCTTAGTGTCCACTATTTTAGTCATATTTTGTTATACCAGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGTTAGTGGTTGCCAGAGGAGGAGAATTTGGGTTCATGATATATAGTAATAGTAGTAGGCCCTCCTGTTTGCTAACCGACTTCGTAAGACCATAACCAGTGGACCTGGTAACTAAAAAAAAA]
[+] EMBL BI804467 [CGCTGTTAAGAAGTTCGAGCTTGGGAAGAACATTGGAACCAAATTAATCTTCAGAACCACCTCAAGCTTAGTGTCCACTATTTTAGTCATATTTTGTTATACCAGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGTTAGTGGTTGCCAGAGGAGGAGAATTTGGGTTCATGATATATAGTAATAGTAGTAGGCCCTCCTGTTTGCTAACCGACTTCGTAAGACCATAACCAGTGGACCTGGTAACTAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TTGCAGTTACAACCGGCAAACCTCTCGCGACCCTGCACCGTAGCAGCGTCGACGCGAGGC 60
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 GGACAGCCTCTTCTTCCTCCTCCCTTTCCACCCCCCACAGAGATCTCGCCTCTCTCCTCC 120
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TCCCTTTCCCTCTCCTTCCTTCCAGATCTCTCCACGCGCCGCCCCGATCTCTTCCCCCCA 180
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 CCCCCACCTCGTCACCGGCGGGGAGGAGGGCCCGGCCGCCGGCAGCCATGATCTCCTCCA 240
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 GTAAGCTCAAGTCCGTCGACTTCTACAGGAAAATTCCTAGGGATTTGACCGAGGCATCAC 300
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TATCTGGGGCTGGATTGTCCATTGTAGCAGCACTAGCTATGGTGTTTTTGTTTGGAATGG 360
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 AACTGAGTAATTACTTAGCAGTCAATACTAGCACATCTGTGATTGTTGATAGGAGTTCAG 420
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 ATGGGGAGTTCTTACGGATAGATTTTAACTTAAGCTTTCCTGCGCTTTCATGCGAATTTG 480
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 CATCAGTTGATGTCAGTGATGTTCTGGGAACAAACAGATTGAACATAACGAAAACTGTTC 540
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 GCAAATATTCAATTGATCGGAATTTAGTGCCTACTGGATCCGAGTTCCACCCAGGACCTA 600
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TTCCTACGGTCAGCAAACATGGAGATGATGTTGAAGAAAACCATGATGATGGTTCAGTTC 660
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 CCTTGTCCTCTCGCAATTTTGATAGCTATTCACACCAGTATCCTGTTTTGGTTGTTAATT 720
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TTTATGCCCCCTGGTGTTACTGGAGCAATCGATTGAAACCTTCGTGGGAGAAGACTGCAA 780
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 AAATAATGAGGGAGAGATATGATCCTGAAATGGATGGCAGAATCATTCTTGCCAAGGTTG 840
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 ACTGCACTGAAGAAATTGACTTGTGTAGGAGGCACCATATACAAGGTTATCCATCCATTC 900
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 GCATTTTCCGTAAAGGGAGTGATCTTAAGGAAAACCAGGGTCACCATGATCATGAATCAT 960
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 ACTACGGCGATCGTGATACTGAGAGTTTAGTAGCGGCAATGGAAACTTATGTTGCAAACA 1020
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TCCCAAAAGATGCCCATGTTCTAGCTTTGGAGGACAAATCCAATAAGACTGTTGATCCTG 1080
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 CAAAACGCCCTGCTCCATTGACCAGTGGATGCAGAATAGAAGGTTTTGTGCGGGTAAAAA 1140
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 AGGTCCCTGGGAGTGTTGTAATCTCAGCTCGATCTGGTTCCCACTCCTTTGATCCATCCC 1200
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 AGATAAATGTTTCCCACTATGTAACACAGTTCTCTTTTGGCAAAAGGCTATCGGCAAAGA 1260
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 ---------------------TTCCNNCTCACCTTAGGGCCAATTGGGTCCCGGCCCCCC 39
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TGTTTAATGAACTGAAAAGACTAACTCCCTATGTTGGTGGCCACCATGATAGATTAGCTG 1320
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 CTCGAGTCGACCCACGCNTCCNATGGTGATNCCAATCCCAACGTTACTATTGAGCATTNC 99
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 GTCAATCCTACAT-TGTTAAGCATGGTGATGTCAATGCCAACGTTACTATTGAGCATTAC 1379
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 CNGCAAATTGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTT 159
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 CTGCAAATTGTGAAAACTGAGCTTGTTACACTGAGATCATCAAAGGAATTGAAACTGGTT 1439
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 GAGGAGTATGAATCCACAGCNCACANCAGCTTGGTGCACAGCTTCTATGTNCCTGTTGTG 219
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 GAGGAGTATGAATACACAGCGCACAGCAGCTTGGTGCACAGCTTCTATGTTCCTGTTGTG 1499
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 AAATNCCATTTTGAACCTTCTCCCATGCAGGTCTTGGTAACTGAACTTCCAAAANCCTTC 279
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 AAATTCCATTTTGAACCTTCTCCCATGCAGGTCTTGGTAACTGAACTTCCAAAATCCTTC 1559
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 TCCCATTTCATCACAAATGTTTGTNCTATCATTGGAGGNGTTTTCNCGGTTNCTGGAATA 339
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 TCCCATTTCATCACAAATGTTTGTGCTATCATTGGAGGAGTTTTCACGGTTGCTGGAATA 1619
consensus_11599#2 ------------------------------------------------------------
consensus_11599#1 CTGGATTCCATCTTCCACAACNCCTTGCGGCTGGTTAAGAAGGTCGAGCTTGGGAAGAAC 399
consensus_11599#3 ----------------------------CGCTG-TTAAGAAGTTCGAGCTTGGGAAGAAC 31
consensus_11599#0 CTGGATTCCATCTTCCACAACACCTTGCGGCTGGTTAAGAAGGTCGAGCTTGGGAAGAAC 1679
consensus_11599#2 ------------------------------------AAAAAAAAAAA----AAAAAAAAA 20
** ** * ** **
consensus_11599#1 ATTTGAACAACAAGATTATTCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTT 459
consensus_11599#3 ATTGGAACCA---AATTAATCTTCAGAACCA-CCTCAAGCTTAGTG--TCCACTA-TTTT 84
consensus_11599#0 ATTTGAACAACAAGATTAATCTTCAGAAGCAGCCTCAAGCTTAGTGGTTGCACTAGTTTT 1739
consensus_11599#2 AAAAAAAAAAAAAAAAAAAGCTT-----GCGGCCGCAAGCTTAGTGGTTGCACTAGTTTT 75
* ** * * * *** * ** *********** * ***** ****
consensus_11599#1 AGTCATTATTTTGTTATACCNGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGGT 519
consensus_11599#3 AGTCAT-ATTTTGTTATACCAGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGTT 143
consensus_11599#0 AGTCATTATTTTGTTATACCAGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGGT 1799
consensus_11599#2 AGTCATTATTTTGTTATACCAGGGTAGGAATTCTTAATATATCAAGATGTGAAAGAGGGT 135
****** ************* ************************************* *
consensus_11599#1 AGTGGGTTGGCAGAGGAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGAC 579
consensus_11599#3 AGTGG-TTGCCAGAGGAGGAGAATTTGGGTTCATGATATATAGTAATAGTAG-TAGG--C 199
consensus_11599#0 AGTGGGTTGGCAGAGGAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGAC 1859
consensus_11599#2 AGTGGGTTGGCAGAGGAGGAGAAGTTGGGGTCATGATATATAGTAATAGTAGGTAGGGAC 195
***** *** ************* ***** ********************** **** *
consensus_11599#1 CTCACTGTTTTGCTAAACGACTTCGTAAGAACAATAAGACAGTGGATCCTTGTTAACTAT 639
consensus_11599#3 CCTCCTGTTT-GCTAACCGACTTCGTAAGACCAT--AACCAGTGGACC--TGGTAACTAA 254
consensus_11599#0 CTCACTGTTTTGCTAAACGACTTCGTAAGAACAATAATACAGTGGATCCTTGTTAACTAT 1919
consensus_11599#2 CTCACTGTTTTGCTAAACGACTTCGTAAAAACAATAAGACAGTGGATCCTTGTTAACTAT 255
* ****** ***** *********** * ** * ******* * ** ******
consensus_11599#1 ACCCTACGTTAATTCGTCCAGACT-TGTGTTGTGTTAAAAAAAAAAAAAAAAAAAAAAAA 698
consensus_11599#3 AAAAAAA----------------------------------------------------- 261
consensus_11599#0 ACCCTACGTTAATTCGTCCAGACTATGTGTTGTGTTACTCTGTTTACTGTTGTGATGGCA 1979
consensus_11599#2 ACCCTACGTTAATTCGTCCAGACT-TGTGTTGTGTTACTCTGTTTACTGTTGTGATGGCA 314
* *
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 CATGTCATTACTCGTTACTCTGGATTTGTCTTCCGTCTCAAAATTTATTTACGGTAACCA 2039
consensus_11599#2 CCTGTCATTACTCGTTACTCTGGATTTGTCTTCCGTCTCAAAATTCATCTACGGTAACCA 374
consensus_11599#1 ------------------------------------------------------------
consensus_11599#3 ------------------------------------------------------------
consensus_11599#0 GAATTTTTAAGTTCAAAAAAAAAAAAAA-------------------------------- 2067
consensus_11599#2 GAATTTTTAAGTTCGCTTAAAAAAAAAAAAAAAAAAAAAAGCTTGCGGGCCGCCACCGCG 434
consensus_11599#1 ---
consensus_11599#3 ---
consensus_11599#0 ---
consensus_11599#2 GGG 437
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||