cluster # 11600

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Oryza sativa
cluster # 11600 cluster # 11600 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11600#0 length = 1818 sequences # 7

consensus_11600#1 length = 802 sequences # 1
consensus_11600#2 length = 596 sequences # 1

consensusID : consensus_11600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1818
fasta sequence

                              [TCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGCCGCGACCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATCCAGAGGTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGAAAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGAAGATAAGGAAAGCTAAGGAAATTGTGGACAATGCCCTCAAGATAAGAGAAGAACTGCATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGAACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGGATCCATATGTATCGGATGATGAGTTCGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGAGAGAATCATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTGTGGTAACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGCTGATGAACTTAAGATTAATGTATGGTTACCGAGTGGTGAAAAATGTGAGGGTTTTATTTCAAATGTGGATCTGTACTACAACATTTGTTTGGTTACAGTTCACTGTACTTCTAACCTGCCAAAGAAAAGCTTCAATGACGACACTGGATTTTTTGATTTATATGGCAACCATTCGAAAGATGTTGTAGCTTTAGGCCGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGAAAGCTAATTCCAAGAAGACACCGATTTGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAGATTACAAAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCAT-GGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAGCATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAGATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTCTATTCTCCGAAGATTGGTACAGTTAGCAGGACTAGGGTTTGTTTTATCCTTATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTGTAAGGTGGAATTACACGGATAGTGTGAAATGTTAATAAGGGTTTCACCAGAATTCAAGTTGAGTAGTGAAGCTGTATCGGTGGAATTTTTTTGTATGGTATTACCATGACATCCTCATGGTAGGCACAAAATATAGCACCTGACTTGGGAAAGGCGTTCAATTGTCGAGTTAAAAACATAGCTGTTGTAACCGTTAATCCGTGATGGCGATGGGATCGA]

[+] EMBL AK070597             [TCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGCCGCGACCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATCCAGAGGTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGAAAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGAAGATAAGGAAAGCTAAGGAAATTGTGGACAATGCCCTCAAGATAAGAGAAGAACTGCATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGAACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGGATCCATATGTATCGGATGATGAGTTCGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGAGAGAATCATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTGTGGTAACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGCTGATGAACTTAAGATTAATGTATGGTTACCGAGTGGTGAAAAATGTGAGGGTTTTATTTCAAATGTGGATCTGTACTACAACATTTGTTTGGTTACAGTTCACTGTACTTCTAACCTGCCAAAGAAAAGCTTCAATGACGACACTGGATTTTTTGATTTATATGGCAACCATTCGAAAGATGTTGTAGCTTTAGGCCGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGAAAGCTAATTCCAAGAAGACACCGATTTGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAGATTACAAAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCAT GGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAGCATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAGATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTCTATTCTCCGAAGATTGGTACAGTTAGCAGGACTAGGGTTTGTTTTATCCTTATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTGTAAGGTGGAATTACACGGATAGTGTGAAATGTTAATAAGGGTTTCACCAGAATTCAAGTTGAGTAGTGAAGCTGTATCGGTGGAATTTTTTTGTATGGTATTACCATGACATCCTCATGGTAGGCACAAAATATAGCACCTGACTTGGGAAAGGCGTTCAATTGTCGAGTTAAAAACATAGCTGTTGTAACCGTTAATCCGTGATGGCGATGGGATCGA]
[+] EMBL CF305543             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTCTAACCTGCCAAAGAAAAGCTTCAATGACGACACTGGATTTTTTGATTTATATGGCAACCATTCGAAAGATGTTGTAGCTTTAGGCCGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGAAAGCTAATTCCAAGAAGACACCGATTTGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAGATTACAAAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCAT GGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAGCATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C27370               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATTTATATGGCATCCATTCGAAAGATGTTGTAGCTTTAGGCCGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGAAAGCTAATTCCAAGAAGACACCGATTTGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAGATTACAAAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCATGGGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGA NATTCTGAGATAAAAGTTNGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB666521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTTTCTTCGTGCAAGATTACAAAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCAT GGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAGCATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAGATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTCTATTCTCCGAAGATTGGTACAGTTAGCAGGACTAGGGTTTGTTTTATCCTTATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTGTAAGGTGGAATTACACGGATAGTGTGAAATGTTAATAAGGGTTTCACCAGAATTCAAGTTGAGTAGTGAAGCTGTATCGGTGGAATTTTTTTGTATGGTATTACCATGA                                                                                                              ]
[-] EMBL CB666522             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCAT GGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAGCATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAGATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTCTATTCTCCGAAGATTGGTACAGTTAGCAGGACTAGGGTTTGTTTTATCCTTATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTGTAAGGTGGAATTACACGGATAGTGTGAAATGTTAATAAGGGTTTCACCAGAATTCAAGTTGAGTAGTGAAGCTGTATCGGTGGAATTTTTTTGTATGGTATTACCATGACATCCTCATGGTAGGCACAAAATATAGCGCCTGACTTGGGAAAGGCGTTCAAT                                                         ]
[-] EMBL CB677292             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAGCATTTTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAGATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTTTATTCTCCGAAGATTGGTACAGTTAGCAGGACTAGGGTTTGTTTTATCCTTATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTGTAAGGTGGAATTACACGGATAGTGTGAAATGTTAATAAGGGTTTCACCAGAATTCAAGTTGAGTAGTGAAGCTGTATCGGTGGAATTTTTTTGTATGGTATTACCATGACATCCTCATGGTAGGCACAAAATATAGCACCTGACTTGGGAAAGGCGTTCAATTGTCGAGTTAAAAACATAGCTGTTGTAACCGTTAATCCGTGATGGCG          ]
[+] EMBL AU166876             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATNTGAAGCCNCAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTNTATTCTCCGAAGATTGGTACAGTTAGCAGGACTAGGGTTTGTTTTATCCTTATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTGTAAGGTGGAATTACNCGGATAGTGTGAAATGTTAATAAGGGTTTCNCCAGAATTCAAGTTGAGTAGTGAAGCTGTATCGGTGGAATTTTTTTGTATGGTATTACCATGACATCCTCATGGTAGGCACAAAATATAGCACCTGACTTGGGAAAaaaaaa                                                             ]




>consensus_11600#0
TCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGCCGCGA
CCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATCCAGAG
GTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGAAAGAA
CTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGAAGATA
AGGAAAGCTAAGGAAATTGTGGACAATGCCCTCAAGATAAGAGAAGAACTGCATCAAAAG
TATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGAACAAA
CGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGGATCCATAT
GTATCGGATGATGAGTTCGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAGTTGAG
AAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGAGAGAAT
CATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTGTGGTA
ACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGCTGATGAACTTAAGATT
AATGTATGGTTACCGAGTGGTGAAAAATGTGAGGGTTTTATTTCAAATGTGGATCTGTAC
TACAACATTTGTTTGGTTACAGTTCACTGTACTTCTAACCTGCCAAAGAAAAGCTTCAAT
GACGACACTGGATTTTTTGATTTATATGGCAACCATTCGAAAGATGTTGTAGCTTTAGGC
CGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGAAAGCTAATTCCAAGAAGACAC
CGATTTGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAGATTACAAAGATAGGTGTTGGT
GGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAA
ACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGG
AAGGTTGTACGGCCATTGCATGGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTCGCT
TCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTA
GAACCTTCAGCAGAGCATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGT
ATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAG
ATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCT
GTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTT
ACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCT
CGTGGAGTTCTATTCTCCGAAGATTGGTACAGTTAGCAGGACTAGGGTTTGTTTTATCCT
TATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTGTAAGGTGGAATTACACGGATA
GTGTGAAATGTTAATAAGGGTTTCACCAGAATTCAAGTTGAGTAGTGAAGCTGTATCGGT
GGAATTTTTTTGTATGGTATTACCATGACATCCTCATGGTAGGCACAAAATATAGCACCT
GACTTGGGAAAGGCGTTCAATTGTCGAGTTAAAAACATAGCTGTTGTAACCGTTAATCCG
TGATGGCGATGGGATCGA

consensusID : consensus_11600#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 802
fasta sequence

                              [GCGCCTCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGCCGCGACCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATCCAGAGGTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGAAAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGAAGATAAGGAAAGCTAAGGAAATTGTGGACAATGCCCTCAAGATAAGAGAAGAACTGCATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGAACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGGATCCATATGTATCGGATGATGAGTTCGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGAGAGAATCATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTGTGGTAACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGCTGATGAACTTAAGGTGACTGCATTCTCCTTTTCTTTGCTTTTTGGAATCATTGTCTTTCTTCAATGGTGTCACTAAACTCTGCTATGTGATATTGGTCTCCAGATTAATGTATGGTTACCGAGTGGGTGAAAATGTGAGGGTTTTATTTCAAA]

[+] EMBL CB677291             [GCGCCTCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGCCGCGACCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATCCAGAGGTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGAAAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGAAGATAAGGAAAGCTAAGGAAATTGTGGACAATGCCCTCAAGATAAGAGAAGAACTGCATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGAACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGGATCCATATGTATCGGATGATGAGTTCGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGAGAGAATCATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTGTGGTAACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGCTGATGAACTTAAGGTGACTGCATTCTCCTTTTCTTTGCTTTTTGGAATCATTGTCTTTCTTCAATGGTGTCACTAAACTCTGCTATGTGATATTGGTCTCCAGATTAATGTATGGTTACCGAGTGGGTGAAAATGTGAGGGTTTTATTTCAAA]




>consensus_11600#1
GCGCCTCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGC
CGCGACCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATC
CAGAGGTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGA
AAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGA
AGATAAGGAAAGCTAAGGAAATTGTGGACAATGCCCTCAAGATAAGAGAAGAACTGCATC
AAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGA
ACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGGATC
CATATGTATCGGATGATGAGTTCGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAG
TTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGAG
AGAATCATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTG
TGGTAACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGCTGATGAACTTA
AGGTGACTGCATTCTCCTTTTCTTTGCTTTTTGGAATCATTGTCTTTCTTCAATGGTGTC
ACTAAACTCTGCTATGTGATATTGGTCTCCAGATTAATGTATGGTTACCGAGTGGGTGAA
AATGTGAGGGTTTTATTTCAAA

consensusID : consensus_11600#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 596
fasta sequence

                              [TTTAGTTTAAGGTCCAAGTTTTTATAGACATGTTTTACTAGTAAATATATTCTTCATCTTAAAAAAAGGTTCTGAGCTACATAACTAAGCAAGCAAAGCAATTAAGCTTGGTATGTCTAATTCTAGACTTTGGAAAGAAATTTCAGCATTTATGTTTAATTTTGTACTACTTTTTATTGGAACAAGCCAGTATGTCAATTAAATCTGTAGTGTATTTGATGTGCTTCTTGACTAATTATTTACATCATTTTTTTTAACATCCAGTCATTACTATACCAATCAAGTCACACTGTTAGTTCGTGGTAATATTGGGACAACTTAGTAAAACATGTGGTTTGCTTACCACTTTTAGAATAATGGATAAAATGCTGTCTGGTTATATAGGAAGGTTGTACGGCCATTGCATGGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTTGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTATGCATCCTTTTCTTATCATACAAATTTGTACATTGATGTTAGTGAAATTGGAATTTTAATGGTTTATTCTTATCATACTAACTTGTCACAT]

[+] EMBL CF306569             [TTTAGTTTAAGGTCCAAGTTTTTATAGACATGTTTTACTAGTAAATATATTCTTCATCTTAAAAAAAGGTTCTGAGCTACATAACTAAGCAAGCAAAGCAATTAAGCTTGGTATGTCTAATTCTAGACTTTGGAAAGAAATTTCAGCATTTATGTTTAATTTTGTACTACTTTTTATTGGAACAAGCCAGTATGTCAATTAAATCTGTAGTGTATTTGATGTGCTTCTTGACTAATTATTTACATCATTTTTTTTAACATCCAGTCATTACTATACCAATCAAGTCACACTGTTAGTTCGTGGTAATATTGGGACAACTTAGTAAAACATGTGGTTTGCTTACCACTTTTAGAATAATGGATAAAATGCTGTCTGGTTATATAGGAAGGTTGTACGGCCATTGCATGGATTAAGGGTTGGAAATCTTCACAAAGAGTCTCTTGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTATGCATCCTTTTCTTATCATACAAATTTGTACATTGATGTTAGTGAAATTGGAATTTTAATGGTTTATTCTTATCATACTAACTTGTCACAT]




>consensus_11600#2
TTTAGTTTAAGGTCCAAGTTTTTATAGACATGTTTTACTAGTAAATATATTCTTCATCTT
AAAAAAAGGTTCTGAGCTACATAACTAAGCAAGCAAAGCAATTAAGCTTGGTATGTCTAA
TTCTAGACTTTGGAAAGAAATTTCAGCATTTATGTTTAATTTTGTACTACTTTTTATTGG
AACAAGCCAGTATGTCAATTAAATCTGTAGTGTATTTGATGTGCTTCTTGACTAATTATT
TACATCATTTTTTTTAACATCCAGTCATTACTATACCAATCAAGTCACACTGTTAGTTCG
TGGTAATATTGGGACAACTTAGTAAAACATGTGGTTTGCTTACCACTTTTAGAATAATGG
ATAAAATGCTGTCTGGTTATATAGGAAGGTTGTACGGCCATTGCATGGATTAAGGGTTGG
AAATCTTCACAAAGAGTCTCTTGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGT
TTGTGGTGTGATTGTGGAGAAGGTATGCATCCTTTTCTTATCATACAAATTTGTACATTG
ATGTTAGTGAAATTGGAATTTTAATGGTTTATTCTTATCATACTAACTTGTCACAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11600#0      -----TCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGC 55
consensus_11600#1      GCGCCTCGGCGTCTCGCCGCCGGCGGGAGGTCCGCCGCCCTTCCAGGCTGCAGCGGCCGC 60
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      CGCGACCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATC 115
consensus_11600#1      CGCGACCACAGATGTCGACCAATGAGATCTCTGGCAGCAATGAGCTGTGTGCTCAAGATC 120
consensus_11600#2      ---------------------------------------TTTAGTTTAAGGTCCAAGTTT 21
                                                               * ** *    *  **** * 

consensus_11600#0      CAGAGGTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGA 175
consensus_11600#1      CAGAGGTCATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGA 180
consensus_11600#2      TTATAGACATGTTTTACTAGTAAATATATTCTTCATCTTAAAAAAAGGTTCTGAGCTACA 81
                            * ****  ** ***  *  *      ***   * ***  *   * *****  * *

consensus_11600#0      AAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGA 235
consensus_11600#1      AAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGA 240
consensus_11600#2      T--AACTAAGCAAGCAAAGCAATTAA-GCTTGGTATGTCTA-ATTCTAGACTTTGGAAAG 137
                          ****    * **  ** **  ** ** * * *         * ****       *  

consensus_11600#0      AGATAAGGAAAGCTAAGGA-AATTGTGGACAATGCCCT--CAAGATAAGAGAAGAACTGC 292
consensus_11600#1      AGATAAGGAAAGCTAAGGA-AATTGTGGACAATGCCCT--CAAGATAAGAGAAGAACTGC 297
consensus_11600#2      AAATTTCAGCATTTATGTTTAATTTTGTACTACTTTTTATTGGAACAAGCCAGTATGTCA 197
                       * **      *  ** *   **** ** ** *     *      * ***  *  *  *  

consensus_11600#0      ATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAA 352
consensus_11600#1      ATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAA 357
consensus_11600#2      ATTAAATCTGTAGTGTATTTGATGTGCTTCTTGACTAATTATTTACATCATTTTTTTTAA 257
                       ** ***  * *     *   **        *  *  **      * *  *    **  **

consensus_11600#0      GGAACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGG 412
consensus_11600#1      GGAACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGG 417
consensus_11600#2      CATCCAGTCAT--TACTATACCAATCA--AGTCACACTGTTAGTTCGTGGTAATATTGGG 313
                           **  * *  *** *     ****  *  **  **     **   *   * * ****

consensus_11600#0      ATCCATATGTATCGGATGATGAGTTCGGGACATCATTTGAGC--TGAA--GCGTACGGGT 468
consensus_11600#1      ATCCATATGTATCGGATGATGAGTTCGGGACATCATTTGAGC--TGAA--GCGTACGGGT 473
consensus_11600#2      ACAACTTAGTAAAACATGTGGTTTGCTTACCACTTTTAGAATAATGGATAAAATGCTGTC 373
                       *    *  ***    ***  *  * *    **   ** **    ** *     * * *  

consensus_11600#0      TGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTC 528
consensus_11600#1      TGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTC 533
consensus_11600#2      TGGTTATATAGGAAGGTTGTAC-GGCCATTGCATGGATTAA----GGGTTGGAAATCTTC 428
                       ***  *  *  **** ***     * * ****  * *  *     **  * **    ***

consensus_11600#0      ACTGGAGAGAATCATCTA-TTCTCTTGCTCTGGTACTATTATTGAATTTCTGAA---TGG 584
consensus_11600#1      ACTGGAGAGAATCATCTA-TTCTCTTGCTCTGGTACTATTATTGAATTTCTGAA---TGG 589
consensus_11600#2      AC---AAAGAGTCTCTTGCTTCACTTGAGAAGATA-TGTCATGAGTTCCCTAAGGTTTGT 484
                       **   * *** **   *  *** ****    * ** * * **    *  ** *    ** 

consensus_11600#0      TATTTGTTCTGTGGTAACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGC 644
consensus_11600#1      TATTTGTTCTGTGGTAACATCTGCAAGTTTAATTAGATGCATGGACAAAGACGAGCAAGC 649
consensus_11600#2      GGTGTGATTGTGGAGAAGGTATGCATCCTTTTCTTATCATACAAATTTGTACATTGATGT 544
                         * ** *    *  **  * ****   **   *      *   *     **    * * 

consensus_11600#0      TGATGAACTTAAGATTAATGTATGGT--TACCGAGTGGTGAAAAATGTGAGGGTTTTATT 702
consensus_11600#1      TGATGAACTTAAGGTGACTGCATTCTCCTTTTCTTTGCTTTTTGGAATCATTGTCTTTCT 709
consensus_11600#2      TAGTGAAATTGGAATT--TTAATGGTTTATTCTTATCATACTAACTTGTCACAT------ 596
                       *  **** **    *   *  **  *         *  *              *      

consensus_11600#0      TCAAATGTGGATCTGTACTACAACATTTG---TTTGGTTACAGTTCACTGTACTTCTAAC 759
consensus_11600#1      TCAATGGTGTCACTAAACTCTGCTATGTGATATTGGTCTCCAGATTAATGTATGGTTACC 769
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      CTGCCAAAGAAAAGCTTCAATGACGACACTGGATTTTTTGATTTATATGGCAACCATTCG 819
consensus_11600#1      GAGTGGGTGAAAATGTGAGGGTTTTATTTCAAA--------------------------- 802
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      AAAGATGTTGTAGCTTTAGGCCGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGA 879
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      AAGCTAATTCCAAGAAGACACCGATTTGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAG 939
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      ATTACAAAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATG 999
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      AACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTA 1059
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      CAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCATGGATTAAGGGTTGGAAAT 1119
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      CTTCACAAAGAGTCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGT 1179
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      GGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAGCATTCTGAGATAAAAGTTGGGGAC 1239
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      ATCATCACCCATCTTGATGGTATGGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTG 1299
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      CTCGATAGGTGTGTCACACAGATGCTAGAAAAACAGAACTTGTCAGAGGACTGCAACCAG 1359
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      ATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGA 1419
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      ACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCG 1479
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      ATTATTGTTCGGCAATATGCTCGTGGAGTTCTATTCTCCGAAGATTGGTACAGTTAGCAG 1539
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      GACTAGGGTTTGTTTTATCCTTATACGTAGAAGTTTCTCATCATGAAAAGTATTTATGTG 1599
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      TAAGGTGGAATTACACGGATAGTGTGAAATGTTAATAAGGGTTTCACCAGAATTCAAGTT 1659
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      GAGTAGTGAAGCTGTATCGGTGGAATTTTTTTGTATGGTATTACCATGACATCCTCATGG 1719
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      TAGGCACAAAATATAGCACCTGACTTGGGAAAGGCGTTCAATTGTCGAGTTAAAAACATA 1779
consensus_11600#1      ------------------------------------------------------------
consensus_11600#2      ------------------------------------------------------------
                                                                                   

consensus_11600#0      GCTGTTGTAACCGTTAATCCGTGATGGCGATGGGATCGA 1818
consensus_11600#1      ---------------------------------------
consensus_11600#2      ---------------------------------------