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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11604#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3897 fasta sequence
[GCTTGCGTTTGCGTGAGCTCCAAAACCCCCACACCCCACTCGCCAACGCCAAAGCCATCGGCGGCGTGGACTCCTCCCAGAAATCCGTAGATAGGTGGCGTCCTAGCGATCGGGAGCGGAGATGGCTGCTGCTGCTGCGGCTGCGGCGGCGGCGGCGGCCGAAGTGGGGAAGCGGGTGCTCGACACGGGCTGGCTCGCCGCGCGCTCCACCGAGGTGGCCCTCACCGGCGAGCAGCTCACCACCACCGACCCGCCGCCCGCCGACCCGGAGCCGACGGCACCCTGGATGCACGCCGCCGTCCCCGGCACCGTGCTGGGGACGCTGCTGAAGAACAAGCTGATCCCCGACCCCTTCTACGGCCTCAACAACGAGTCGATCATCGACATCGCCAAATCCGGGAGGGGGCACTACACCTTCTGGTTTTTCACCACCTTCCAGTGCGCTCCGGCTGGACACCAGCATGTGAGTTTAAACTTTCGTGGAATAAACTATTCAGCTGAAGTGTATTTGAATGGGCATAAAGAGGTACTTCCAAAAGGAATGTTCCGAAGGCACACCCTCGATATTACTGATGTTCTTCGTCCGGATGGTAAAAATCTGCTTGCTGTTCTTGTTCATCCTCCTGTTCATCCTGGTGCAATTCCTCCTCAAGGAGGTCAGGGTGGTGATCATGAGATTGGGAAGGATGTTGCTACTCAATATGTTGAAGGATGGGACTGGATGTGTCCAATAAGGGATCGAAACACTGGTATCTGGGATGAAGTATCAATACCCGTAACTGGGCCTGTGAGGATAATGGACCCCCACCTAGTTTCAACTTTTTATGATGATTTTAAGAGGTCATATCTGCACTGCACGCTTCAGTTGGAGAACAGAAGTTCATGGCTTTCAGATTGTAAATTGAAAATTCAAGTTTCAACTGAACTCGAGGGGAACATTTGCCTGGTGGAACATCTACAGAGTTATGAGATATCAGTTCCTCCTAACTCAGTTCTAGAGTACACTATTCCTCCTTTGTTCTTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTTATACAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGTGAATCTGATTCATCGAATCATCATTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGTGGGAGGATCTTCAAGGTAAATGGTGAACCTGTTTTCATCCGAGGAGGGAACTGGATATTGTCAGATGGCCTTCTTCGATTAACAAGGAAGCGGTATATGACTGACATCAAGTTTCATGCTGATATGAACTTTAATATGCTTCGCTGTTGGGGTGGTGGATTAGCAGAAAGGCCTGATTTTTATCATTTTTGTGATATCTATGGTTTGATGGTTTGGCAGGAATTCTGGATAACTGGAGATGTTGATGGACGAGGAATTCCAATATCAAATCCAAATGGTCCTTTGGACCATGATCTCTTCCTTCTATGTGCTAGAGATACTGTCAAATTACTTAGGAATCATGCTAGCCTAGCTCTATGGGTTGGTGGAAATGAACAAGTCCCACCAGTTGACATTAACAAAGCACTGAAGAATGATCTGAAGTTACATCCTATGTTTGTAAGTAACCATACAACAAAAAGTCCAGGAAAGGATATATCAGAAGACCCAACTGACCCAAGTAAATACCTTGATGGCACTCGAGTGTACGTCCAAGGATCAATGTGGGATGGTTTTGCCAATGGGAAAGGCGACTTTACTGGTGGTCCATATGAGATTCAATATCCAGAGAGCTTTTTCAAGGACAGTTTCTACAAATATGGGTTTAATCCTGAAGTCGGGTCTGTTGGGGTTCCAGTTGCAGCAACAATTAGAGCAACAATGCCCTCAGAAGGTTGGAGCATTCCAATTTTTAAGAAGAGGATCGATGGGTACATAAATGAAGTACCAAATCCAATATGGGATTACCACAAGTACATCCCCTACTCAAAACCAGGGAAAGTCCATGATCAGATTGAACTGTATGGCCATCCAAGTGATCTCGACGATTTCTGTGAAAAAGCACAATTGGTCAATTATGTTCAGTACAGAGCACTTCTGGAAGGATGGACTTCTTTCATGTGGACAAAGTTTACAGGTGTTTTAATTTGGAAGACACAAAATCCATGGACTGGGCTACGAGGACAGTTCTATGATCATCTCCTAGATCAAACAGCTGGGTTTTATGGTTGCCGTTGTGCTGCTGAACCAATTCATGTACAGCTGAATTTGGATAGTTACTTCATAGAGGTGGTAAACACTACAGCCGATGAACTTCGGGATGTGGCTGTCGAAATTTCAGCATGGGATCTAGATGGCGCGTCCCCATATTACAGAGTTACTGAGAAAATAGCAGTGCCACCAAAAAAAGTGCAGCAAGTCACGGAGATGTCATATCCTAAGACGAAGAACCCAAAGCCTGTATATTTTCTACTTCTCAAACTTTTTAAGCTGTCAGACAACCAGGTACTCTCCAGGAACTTTTACTGGCTACATCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCGTCAGAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGTCAGAATGTCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCATGAATCTAGCCGATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACATAGCAGTGGCCTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAACGTAAGAACAGTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTCGGTACACACATCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGAATCCTCCCTGTCCACTACTCCGACAACTACTTCTCCCTCGTACC-GGGGGAGAAGATGGCCATCGACATCTCGTTCGAGGCCCCCCAGGGATCCACCCCCAGGGTCATTCTGAAAGGCTGGAACTATCACCTGGACCATGCAGTGACGTTATAGTAAGAGTACTTCAACTAGCCTGTCAAAATGTGGCCGTGTCGGGGACGGGACAAGATCCCACAGAGCAAGTAGTACATCTCCCTACAATAAAGTGCAGGTAGCGACTTCAAATCGTGACATTGCATGAGCAGTGGGTGTGAATTATTTGTGGTGCCCATCACCTCCGTGATT-CCGTCAGAGACGATCTCAGACGCTCAGGCTCCTGCGTTGTTGACGGTGTCGGCGCCAACCAACAACTTGGGTAAATGTTTGTTTGGGCCAGAACCATTAATAAAAGGGTCACCGTAGTACAATCATCGACCCCTGCATCCAGATGCAGCGACGCAAACGGGGCTAGCATATGCATTTCTATCCATTTTTTCTGCTGCCATTCATTTCCATTGAATCTGGACGAGAGAATCATGGCATTCCTGTTACTCCGATACTTCCTCCGTCTGGCGTTTGTAAGACTATCATACGGGTAGTTGTGTAAACAAACTAACAGAGGTCTTTTGTACGGCTCTTTGTAAAGAAAATGGAATCTGTGTGCTCCTATTAAATATGGCTTTATGAGTTTAAGCACATTGAAGATCAGCTCCTGTATTTTTATATAACTAGCTTCGTGGCTTTTTTTAGAAAAAAAAAAGGTGGAGTTTGTAAGGAAGGATTTTTTACTATTATTTTTTTAGAAACATAGTAAATAGTAAAACGTAGATGTTCACAACATACACACACTCATTTTTATGAATACACATGTACATTGTATCCTTATGGTCACCTCTGAATGACTCACTGAGTCAGTATATCTTGATATTAATAAAGTTATCATAGATATCTCGTGG]
[+] EMBL AK119412 [GCTTGCGTTTGCGTGAGCTCCAAAACCCCCACACCCCACTCGCCAACGCCAAAGCCATCGGCGGCGTGGACTCCTCCCAGAAATCCGTAGATAGGTGGCGTCCTAGCGATCGGGAGCGGAGATGGCTGCTGCTGCTGCGGCTGCGGCGGCGGCGGCGGCCGAAGTGGGGAAGCGGGTGCTCGACACGGGCTGGCTCGCCGCGCGCTCCACCGAGGTGGCCCTCACCGGCGAGCAGCTCACCACCACCGACCCGCCGCCCGCCGACCCGGAGCCGACGGCACCCTGGATGCACGCCGCCGTCCCCGGCACCGTGCTGGGGACGCTGCTGAAGAACAAGCTGATCCCCGACCCCTTCTACGGCCTCAACAACGAGTCGATCATCGACATCGCCAAATCCGGGAGGGGGCACTACACCTTCTGGTTTTTCACCACCTTCCAGTGCGCTCCGGCTGGACACCAGCATGTGAGTTTAAACTTTCGTGGAATAAACTATTCAGCTGAAGTGTATTTGAATGGGCATAAAGAGGTACTTCCAAAAGGAATGTTCCGAAGGCACACCCTCGATATTACTGATGTTCTTCGTCCGGATGGTAAAAATCTGCTTGCTGTTCTTGTTCATCCTCCTGTTCATCCTGGTGCAATTCCTCCTCAAGGAGGTCAGGGTGGTGATCATGAGATTGGGAAGGATGTTGCTACTCAATATGTTGAAGGATGGGACTGGATGTGTCCAATAAGGGATCGAAACACTGGTATCTGGGATGAAGTATCAATACCCGTAACTGGGCCTGTGAGGATAATGGACCCCCACCTAGTTTCAACTTTTTATGATGATTTTAAGAGGTCATATCTGCACTGCACGCTTCAGTTGGAGAACAGAAGTTCATGGCTTTCAGATTGTAAATTGAAAATTCAAGTTTCAACTGAACTCGAGGGGAACATTTGCCTGGTGGAACATCTACAGAGTTATGAGATATCAGTTCCTCCTAACTCAGTTCTAGAGTACACTATTCCTCCTTTGTTCTTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTTATACAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGTGAATCTGATTCATCGAATCATCATTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGTGGGAGGATCTTCAAGGTAAATGGTGAACCTGTTTTCATCCGAGGAGGGAACTGGATATTGTCAGATGGCCTTCTTCGATTAACAAGGAAGCGGTATATGACTGACATCAAGTTTCATGCTGATATGAACTTTAATATGCTTCGCTGTTGGGGTGGTGGATTAGCAGAAAGGCCTGATTTTTATCATTTTTGTGATATCTATGGTTTGATGGTTTGGCAGGAATTCTGGATAACTGGAGATGTTGATGGACGAGGAATTCCAATATCAAATCCAAATGGTCCTTTGGACCATGATCTCTTCCTTCTATGTGCTAGAGATACTGTCAAATTACTTAGGAATCATGCTAGCCTAGCTCTATGGGTTGGTGGAAATGAACAAGTCCCACCAGTTGACATTAACAAAGCACTGAAGAATGATCTGAAGTTACATCCTATGTTTGTAAGTAACCATACAACAAAAAGTCCAGGAAAGGATATATCAGAAGACCCAACTGACCCAAGTAAATACCTTGATGGCACTCGAGTGTACGTCCAAGGATCAATGTGGGATGGTTTTGCCAATGGGAAAGGCGACTTTACTGGTGGTCCATATGAGATTCAATATCCAGAGAGCTTTTTCAAGGACAGTTTCTACAAATATGGGTTTAATCCTGAAGTCGGGTCTGTTGGGGTTCCAGTTGCAGCAACAATTAGAGCAACAATGCCCTCAGAAGGTTGGAGCATTCCAATTTTTAAGAAGAGGATCGATGGGTACATAAATGAAGTACCAAATCCAATATGGGATTACCACAAGTACATCCCCTACTCAAAACCAGGGAAAGTCCATGATCAGATTGAACTGTATGGCCATCCAAGTGATCTCGACGATTTCTGTGAAAAAGCACAATTGGTCAATTATGTTCAGTACAGAGCACTTCTGGAAGGATGGACTTCTTTCATGTGGACAAAGTTTACAGGTGTTTTAATTTGGAAGACACAAAATCCATGGACTGGGCTACGAGGACAGTTCTATGATCATCTCCTAGATCAAACAGCTGGGTTTTATGGTTGCCGTTGTGCTGCTGAACCAATTCATGTACAGCTGAATTTGGATAGTTACTTCATAGAGGTGGTAAACACTACAGCCGATGAACTTCGGGATGTGGCTGTCGAAATTTCAGCATGGGATCTAGATGGCGCGTCCCCATATTACAGAGTTACTGAGAAAATAGCAGTGCCACCAAAAAAAGTGCAGCAAGTCACGGAGATGTCATATCCTAAGACGAAGAACCCAAAGCCTGTATATTTTCTACTTCTCTAACTTTTTAAGCTGTCAGACAACCAGGTACTCTCCAGGAACTTTTACTGGCTACATCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCGTCAGAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGTCAGAATGTCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCATGAATCTAGCCGATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACATAGCAGTGGCCTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAACGTAAGAACAGTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTCGGTACACACATCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGAATCCTCCCTGTCCACTACTCCGACAACTACTTCTCCCTCGTACC GGGGGAGAAGATGGCCATCGACATCTCGTTCGAGGCCCCCCAGGGATCCACCCCCAGGGTCATTCTGAAAGGCTGGAACTATCACCTGGACCATGCAGTGACGTTATAGTAAGAGTACTTCAACTAGCCTGTCAAAATGTGGCCGTGTCGGGGACGGGACAAGATCCCACAGAGCAAGTAGTACATCTCCCTACAATAAAGTGCAGGTAGCGACTTCAAATCGTGACATTGCATGAGCAGTGGGTGTGAATTATTTGTGGTGCCCATCACCTCCGTGATT CCGTCAGAGACGATCTCAGACGCTCAGGCTCCTGCGTTGTTGACGGTGTCGGCGCCAACCAACAACTTGGGTAAATGTTTGTTTGGGCCAGAACCATTAATAAAAGGGTCACCGTAGTACAATCATCGACCCCTGCATCCAGATGCAGCGACGCAAACGGGGCTAGCATATGCATTTCTATCCATTTTTTCTGCTGCCATTCATTTCCATTGAATCTGGACGAGAGAATCATGGCATTCCTGTTACTCCGATACTTCCTCCGTCTGGCGTTTGTAAGACTATCATACGGGTAGTTGTGTAAACAAACTAACAGAGGTCTTTTGTACGGCTCTTTGTAAAGAAAATGGAATCTGTG ]
[+] EMBL CB629894 [ CATGGCAAAGCAATCCTTATACAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGTGAATCTGATTCATCGAATCATCATTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGTGGGAGGATCTTCAAGGTAAATGGTGAACCTGTTTTCATCCGAGGAGGGAACTGGATATTGTCAGATGGCCTTCTTCGATTAACAAGGAAGCGGTATATGACTGACATCAAGTTTCATGCTGATATGAACTTTAATATGCTTCGCTGTTGGGGTGGTGGATTAGCAGAAAGGCCTGATTTTTATCATTTTTGTGATATCTATGGTTTGATGGTTTGGCAGGAATTCTGGATAACTGGAGATGTTGATGGACGAGGAATTCCAATATCAAATCCAAATGGTCCTTTGGACCATGATCTCTTCCTTCTATGTGCTAGAGATACTGTCAAATTACTTAGGAATCATGCTAGCCTAGCTCTATGGGTTGGTGGAAATGAACAAGTCCCACCAGTTGACATTAACAAAGCACTGAAGAATGATCTGAAGTTACATCCTATGTTTGTAAGTAACCATACAACAAAAAGTCCAGGAAAGGATATATCAGAAGACCCAACTGACCCAAGTAAATACCTTGATGGCACTCGAGTGTACGTCCAAGGATCAATGTGGGATGGTTTTGCCAATGGGAAAGGCGACTTTACTGATGGTCCATATGAGATTCAATATCCAGAGAGCTTTTTCAAGGACAGTTTCTACAAATATGGGTTTAATCCTGAAGTTGGGTCTGTTGGGG TCCAGTTGCAGCAACAATTAGA ]
[+] EMBL OSR22891A [ CCATATTACAGAGTTACTGAGAAAATAGCAGTNCCACCAAAAAAAGTGCAGCAAGTCACGGAGATGTCATATCCTAAGACGAAGAACCCAAAGCCTGTATATTTNCTACTTCTCAAACTTTTTAAGCTGTCAGACAACCAGGTACTCTCCAGGAACTTTTACTGGCTACATCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCGTCAGAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGTCAGAATGTCCATAGAGA ]
[+] EMBL BQ529588 [ GCAGTGCCACC AAAAAAGTGCAGCAAGTCACGGAGATGTCATATCCTAAGACGAAGAACCCAAAGCCTGTATATTTTCTACTTCTCAAACTTTTTAAGCTGTCAGACAACCAGGTACTCTCCAGGAACTTTTACTGGCTACATCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCGTCAGAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGTCAGAATGTCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCATGAATCTAGCCGATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACATAGCAGTGGCCTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAACGTAAGAACAGTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTCGGTACACACATCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGAATCCTCCCTGTCCACTACTCCGACAACTACTTCTCCCTCGTACC GGGGGAGAAGATGGCCATCGACATCTCGTTCG ]
[+] EMBL C27752 [ TCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCGTCAGAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGTCAGAATGTCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCATGAATCTAGCCGATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACATAGCAGTGGCCTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAACGTAAGAACAGTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTCGGTACACACATCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGNATCCTCCCTGTCCACTACTCCGACAACTACTTCTTCCTCGTACC GGGGAGAA ]
[+] EMBL CF325232 [ AAGACTACAAGTTGTTGGAACAGTATCGTCAGAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGTCAGAATGTCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCATGAATCTAGCCGATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACATAGCAGTGGCCTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAACGTAAGAACAGTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTCGGTACACACATCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGAATCCTCCCTGTCCACTACTCCGACAACTACTTCTCCCTCGTACCGGGGGGAGAAGATGGCCATCGACATCTCGTTCGAGGCCCCCCNAGGATCCACCCCCAGGGTCATTCTGAAAGGCTGGAACTATCACCTGGACCATGCAGTGACGTTATAGTAAGAGTACTTCAACTAGCCTGTCAAAATGTGGCC ]
[-] EMBL CB629895 [ ACATCTCCCTACAATAAAGTGCAGGTAGCGACTTCAAATCGTGACATTGCATGAGCAGTGGGTGTGAATTATTTGTGGTGCCCATCACCTCCGTGATT CCGTCAGAGACGATCTCAGACGCTCAGGCTCCTGCGTTGTTGACGGTGTCGGCGCCAACCAACAACTTGGGTAAATGTTTGTTTGGGCCAGAACCATTAATAAAAGGGTCACCGTAGTACAATCATCGACCCCTGCATCCAGATGCAGCGACGCAAACGGGGCTAGCATATGCATTTCTATCCATTTTTTCTGCTGCCATTCATTTCCATTGAATTTGGACGAGAGAATCATGGCATTCCTGTTACTCCGATACTTCCTCCGTCTGGCGTTTGTAAGACTATCATACGGGTAGTTGTGTAAACAAACTAACAGAGGTCTTTTGTGCTGCTCTTTGTAAAGAAAATGGAATCTGTGTGCTCCTATTAAATATGGCTTTATGAGTTTAAGCACATTGAAGATCAGCTCCTGTATTTTTATATAACTAGCTTCGTGGCTTTTTTTAGAAAAAAAAAAGGTGGAGTTTGTAAGGAAGGATTTTTTACTATTATTTTTTTAGAAACATAGTAAATAGTAAAACGTAGATGTTCACAACATACACACACTCATTTTTATGAATACACATGTACATTGTATCCTTATGGTCACCTCTGAATGACTCACTGAGTCAGTATATCTTGATATTAATAAAGTTATCATAGATATCTCGTGG]
[+] EMBL AU031871 [ CGACTTCAAATCGTGACATTGCATGAGCAGTGGGTGTGAATTATTTGTGGTGCCCATCACCTCCGTGATTCCCGTCAGAGACGATCTCAGACGCTCAGGCTCCTGCGTTGTTGACGGTGTCGGCGCCAACCAACAACTTGGGTAAATGTTTGTTTGGGCCAGAACCATTAATAAAAGGGTCACCGTAGTACAATCATCGACCCCTGCATCCAGATGCAGCGACGCAAACGGGGCTAGCATATGCATTTCTATCCATTTTTTCTGCTGCCATTCATTTCCATTGAATCTGGACGAGAGAATCATGGCATTCCTGTTACTCCGATACTTCCTCCGTCTGGCGTTTGTAAGACTATCATACGGGTAGTTGTGTAAACAAACTAACAGAGGTCTTTTGTACGGCTCTTTGTAAAGAAAATGGAATCTGTGTGCTCCTATTAAAaaaaa ]
consensusID : consensus_11604#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence
[TTTTTTTTTTTTTGAAGGGACTAAGGGGTTTCTTTGTTTGGAATCATGGCTATTTTCAGTTTGTTCGCTTCCTTCTAATTGATACTACCTATTTTGATCTTTAAGAGATATTTACTAAAAACGGGGAACATACTCTCAACTAACTAGCTTGCATCAAAGTAGCACATTATAGCACCAAACTGGAATTTTTTCATATTAGGTCAGGAAGTACATCCCATGACTAATGCCCTACTTTGGACAATATCCAATATTGCTAAAACAATTTTGCATAGTTCCCTTTTTTGAAGGCACACGAAACTTGTTGTAAACACATTTGCCTTGGGCAATCGTTTATTGATAATTCTTTTCAGCAGGAAGCCATGATATAGCAAGAGAGGCTCAAACGCGCGAATTGGCTAAGTCTGTCCTGTATTAATATTTGCAGTTGTTCTTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTTATACAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGGGAATCTGATTCATCGAATCATCATTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGGGGGAGGTATAACTGATTATTTTATGTGCCTAGCACAGTACATAATACTTGAGCTCGTGAAAACCGCTATTGCCACAATCTCAGCTGCCGGA]
[+] EMBL CA762924 [TTTTTTTTTTTTTGAAGGGACTAAGGGGTTTCTTTGTTTGGAATCATGGCTATTTTCAGTTTGTTCGCTTCCTTCTAATTGATACTACCTATTTTGATCTTTAAGAGATATTTACTAAAAACGGGGAACATACTCTCAACTAACTAGCTTGCATCAAAGTAGCACATTATAGCACCAAACTGGAATTTTTTCATATTAGGTCAGGAAGTACATCCCATGACTAATGCCCTACTTTGGACAATATCCAATATTGCTAAAACAATTTTGCATAGTTCCCTTTTTTGAAGGCACACGAAACTTGTTGTAAACACATTTGCCTTGGGCAATCGTTTATTGATAATTCTTTTCAGCAGGAAGCCATGATATAGCAAGAGAGGCTCAAACGCGCGAATTGGCTAAGTCTGTCCTGTATTAATATTTGCAGTTGTTCTTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTTATACAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGGGAATCTGATTCATCGAATCATCATTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGGGGGAGGTATAACTGATTATTTTATGTGCCTAGCACAGTACATAATACTTGAGCTCGTGAAAACCGCTATTGCCACAATCTCAGCTGCCGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11604#0 GCTTGCGTTTGCGTGAGCTCCAAAACCCCCACACCCCACTCGCCAACGCCAAAGCCATCG 60
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GCGGCGTGGACTCCTCCCAGAAATCCGTAGATAGGTGGCGTCCTAGCGATCGGGAGCGGA 120
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GATGGCTGCTGCTGCTGCGGCTGCGGCGGCGGCGGCGGCCGAAGTGGGGAAGCGGGTGCT 180
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CGACACGGGCTGGCTCGCCGCGCGCTCCACCGAGGTGGCCCTCACCGGCGAGCAGCTCAC 240
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CACCACCGACCCGCCGCCCGCCGACCCGGAGCCGACGGCACCCTGGATGCACGCCGCCGT 300
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CCCCGGCACCGTGCTGGGGACGCTGCTGAAGAACAAGCTGATCCCCGACCCCTTCTACGG 360
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CCTCAACAACGAGTCGATCATCGACATCGCCAAATCCGGGAGGGGGCACTACACCTTCTG 420
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GTTTTTCACCACCTTCCAGTGCGCTCCGGCTGGACACCAGCATGTGAGTTTAAACTTTCG 480
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TGGAATAAACTATTCAGCTGAAGTGTATTTGAATGGGCATAAAGAGGTACTTCCAAAAGG 540
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 AATGTTCCGAAGGCACACCCTCGATATTACTGATGTTCTTCGTCCGGATGGTAAAAATCT 600
consensus_11604#1 --------------------------------TTTTTTTTTTTTTGAAGGGACTAAGGGG 28
* ** ** * * * ** **
consensus_11604#0 GCTTGCTGTTCTTGTTCATCCTCCTGTTCATCCTGGTGCAATTCCTCCTCAAGGAGGTCA 660
consensus_11604#1 TTTCTTTGTTTGGAATCATGGCTATTTTCAGTTTG-TTCGCTTCCTTCTAATTGATACTA 87
* **** **** * **** ** * * ***** ** * ** *
consensus_11604#0 GGGTGGTGATCATGAGATTGGGAAGGATGTTGCTACTCAATATGTTGAAGGATGGGACTG 720
consensus_11604#1 C-----CTATTTTGATCTTTAAGAG-ATATT--TACTAAAAAC---GGGGAACATACTCT 136
** *** ** ** ** ** **** ** * * * *
consensus_11604#0 GATGTGTCCAATAAGGGATCGAAACACTGGTATCTGGGATGAAGTATCAATACCCGTA-A 779
consensus_11604#1 CAACTAACTAGCTTGC-ATCAAAGTAGCACATTATAGCACCAAACTGGAATTTTTTCATA 195
* * * * * *** ** * * * * * ** *** * *
consensus_11604#0 CTGGGCCTGTGAGGATAATGGACCCCCA----CCTAGTTTCAACTTTTTATGATGATTTT 835
consensus_11604#1 TTAGGTCAGGAAGTACATCCCATGACTAATGCCCTACTTTGGACAATATCCAATATTGCT 255
* ** * * ** * * * * * **** *** ** * * ** * *
consensus_11604#0 AAGAGGTCATATCTGCACTGCACGCTTCAGTTGGAGAACA-GAAGTTCATGGCTTTCAGA 894
consensus_11604#1 AAAA---CAATTTTGCATAGTTCCCTTTTTTGAAGGCACACGAAACTTGTTGTAAACACA 312
** * ** * **** * * *** * * *** *** * * * ** *
consensus_11604#0 TTGTAAATTGAAAATTCAAGTTTCAACTGAACTCGAGGGGAACATTTGCCTGGTGGAACA 954
consensus_11604#1 TT-TGCCTTGGGCAATCGTTTATTGATAATTCTTTTCAGCAGGAA--GCC--ATGATATA 367
** * *** * ** * * * ** * * * *** ** * *
consensus_11604#0 TCTACAGAGTTATGAGATATCAGTTCCTCCTAACTCAGTTCTAGAGTACACTATTCCTCC 1014
consensus_11604#1 GCAAGAGAGGC-TCAAACGCGCGAATTGGCTAAGTCTGTCCTGTATTA--ATATTTG-CA 423
* * **** * * * * **** ** ** ** * ** **** *
consensus_11604#0 TTTGTTCTTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTTATA 1074
consensus_11604#1 GTTGTTCTTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTTATA 483
***********************************************************
consensus_11604#0 CAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGTGAATCTGATTCATCGAATCATCA 1134
consensus_11604#1 CAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGGGAATCTGATTCATCGAATCATCA 543
************************************ ***********************
consensus_11604#0 TTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGTGGGAGGATCTTCAA 1194
consensus_11604#1 TTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGGGGGAGG----TATA 599
********************************************* ****** * *
consensus_11604#0 GGTAAATGGTGAACCTGTTTTCATCCGAGGAGGGAACTGGATATTGTCAGATGGCCTTCT 1254
consensus_11604#1 ACTGATTATTTTATGTGCCTAGCACAGTACATAATACTTGAGCTCGTGAAAACCGCTATT 659
* * * * * ** * * * * *** ** * ** * * ** *
consensus_11604#0 TCGATTAACAAGGAAGCGGTATATGACTGACATCAAGTTTCATGCTGATATGAACTTTAA 1314
consensus_11604#1 GCCACAATCTCAGCTGCCGGA--------------------------------------- 680
* * * * * ** * *
consensus_11604#0 TATGCTTCGCTGTTGGGGTGGTGGATTAGCAGAAAGGCCTGATTTTTATCATTTTTGTGA 1374
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TATCTATGGTTTGATGGTTTGGCAGGAATTCTGGATAACTGGAGATGTTGATGGACGAGG 1434
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 AATTCCAATATCAAATCCAAATGGTCCTTTGGACCATGATCTCTTCCTTCTATGTGCTAG 1494
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 AGATACTGTCAAATTACTTAGGAATCATGCTAGCCTAGCTCTATGGGTTGGTGGAAATGA 1554
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 ACAAGTCCCACCAGTTGACATTAACAAAGCACTGAAGAATGATCTGAAGTTACATCCTAT 1614
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GTTTGTAAGTAACCATACAACAAAAAGTCCAGGAAAGGATATATCAGAAGACCCAACTGA 1674
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CCCAAGTAAATACCTTGATGGCACTCGAGTGTACGTCCAAGGATCAATGTGGGATGGTTT 1734
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TGCCAATGGGAAAGGCGACTTTACTGGTGGTCCATATGAGATTCAATATCCAGAGAGCTT 1794
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TTTCAAGGACAGTTTCTACAAATATGGGTTTAATCCTGAAGTCGGGTCTGTTGGGGTTCC 1854
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 AGTTGCAGCAACAATTAGAGCAACAATGCCCTCAGAAGGTTGGAGCATTCCAATTTTTAA 1914
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GAAGAGGATCGATGGGTACATAAATGAAGTACCAAATCCAATATGGGATTACCACAAGTA 1974
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CATCCCCTACTCAAAACCAGGGAAAGTCCATGATCAGATTGAACTGTATGGCCATCCAAG 2034
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TGATCTCGACGATTTCTGTGAAAAAGCACAATTGGTCAATTATGTTCAGTACAGAGCACT 2094
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TCTGGAAGGATGGACTTCTTTCATGTGGACAAAGTTTACAGGTGTTTTAATTTGGAAGAC 2154
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 ACAAAATCCATGGACTGGGCTACGAGGACAGTTCTATGATCATCTCCTAGATCAAACAGC 2214
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TGGGTTTTATGGTTGCCGTTGTGCTGCTGAACCAATTCATGTACAGCTGAATTTGGATAG 2274
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TTACTTCATAGAGGTGGTAAACACTACAGCCGATGAACTTCGGGATGTGGCTGTCGAAAT 2334
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TTCAGCATGGGATCTAGATGGCGCGTCCCCATATTACAGAGTTACTGAGAAAATAGCAGT 2394
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GCCACCAAAAAAAGTGCAGCAAGTCACGGAGATGTCATATCCTAAGACGAAGAACCCAAA 2454
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GCCTGTATATTTTCTACTTCTCAAACTTTTTAAGCTGTCAGACAACCAGGTACTCTCCAG 2514
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GAACTTTTACTGGCTACATCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCGTCA 2574
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGT 2634
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CAGAATGTCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCATGAA 2694
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TCTAGCCGATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACATAG 2754
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CAGTGGCCTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAACGT 2814
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 AAGAACAGTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTCGGT 2874
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 ACACACATCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGAATCCTCCCTGT 2934
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CCACTACTCCGACAACTACTTCTCCCTCGTACCGGGGGAGAAGATGGCCATCGACATCTC 2994
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GTTCGAGGCCCCCCAGGGATCCACCCCCAGGGTCATTCTGAAAGGCTGGAACTATCACCT 3054
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GGACCATGCAGTGACGTTATAGTAAGAGTACTTCAACTAGCCTGTCAAAATGTGGCCGTG 3114
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TCGGGGACGGGACAAGATCCCACAGAGCAAGTAGTACATCTCCCTACAATAAAGTGCAGG 3174
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TAGCGACTTCAAATCGTGACATTGCATGAGCAGTGGGTGTGAATTATTTGTGGTGCCCAT 3234
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CACCTCCGTGATTCCGTCAGAGACGATCTCAGACGCTCAGGCTCCTGCGTTGTTGACGGT 3294
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GTCGGCGCCAACCAACAACTTGGGTAAATGTTTGTTTGGGCCAGAACCATTAATAAAAGG 3354
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GTCACCGTAGTACAATCATCGACCCCTGCATCCAGATGCAGCGACGCAAACGGGGCTAGC 3414
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 ATATGCATTTCTATCCATTTTTTCTGCTGCCATTCATTTCCATTGAATCTGGACGAGAGA 3474
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 ATCATGGCATTCCTGTTACTCCGATACTTCCTCCGTCTGGCGTTTGTAAGACTATCATAC 3534
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 GGGTAGTTGTGTAAACAAACTAACAGAGGTCTTTTGTACGGCTCTTTGTAAAGAAAATGG 3594
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 AATCTGTGTGCTCCTATTAAATATGGCTTTATGAGTTTAAGCACATTGAAGATCAGCTCC 3654
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TGTATTTTTATATAACTAGCTTCGTGGCTTTTTTTAGAAAAAAAAAAGGTGGAGTTTGTA 3714
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 AGGAAGGATTTTTTACTATTATTTTTTTAGAAACATAGTAAATAGTAAAACGTAGATGTT 3774
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 CACAACATACACACACTCATTTTTATGAATACACATGTACATTGTATCCTTATGGTCACC 3834
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TCTGAATGACTCACTGAGTCAGTATATCTTGATATTAATAAAGTTATCATAGATATCTCG 3894
consensus_11604#1 ------------------------------------------------------------
consensus_11604#0 TGG 3897
consensus_11604#1 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||