cluster # 11608

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Oryza sativa
cluster # 11608 cluster # 11608 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11608#0 length = 1712 sequences # 8

consensus_11608#1 length = 578 sequences # 1

consensusID : consensus_11608#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1712
fasta sequence

                              [TTCTTCCCCTTCTCTTCTCCGGGCATCACAGGATCGAGGCGATACCGGAGGAGCCCCCGCCATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGCCGACCGGTTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAATTTTGGAT-GACCGATTATT-TTCCCCCCTTACCTGCCTACACACAAAAGGCAGAGCTTAC-AGCAAGTAACGATCATTTGTAGAGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACATTCGGTTCACTGTTGTATTATATTGGAAATGGGGGCAGTAACAAATGAACGAGTACACCCGCCACCGGACTTTGGAATCAGATTTGCTTGTGTTGAAGTTAAAACTATTAAG]

[+] EMBL AK065357             [TTCTTCCCCTTCTCTTCTCCGGGCATCACAGGATCGAGGCGATACCGGAGGAGCCCCCGCCATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGCCGACCGGTTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAGGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAATTTTGGAT GACCGATTATT TTCCCCCCTTACCTGCCTACACACAAAAGGCAGAGCTTAC AGCAAGTAACGATCATTTGTAGAGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACATTCGGTTCACTGTTGTATTATATTGG                                                                                      ]
[+] EMBL CB651972             [                                     GGCGATCCCTTAGGAGCCCCCGCCATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGCCGACCGGTTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCGACAAGAGCAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB678803             [                                                                                                                                                                                                                                                                                                                                                                                                 AGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTNCAGCAAAATGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AY224564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGATTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAAC                                                                                                                                                                                                                                                      ]
[+] EMBL AY224479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGATTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAAC                                                                                                                                                                                                                                                      ]
[-] EMBL CB651973             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAATTTTGGAT GACCGATTATT TTCCCCCCTTACCTGCCTACACACAAAAGGCAGAGCTTAC AGCAAGTAACGATCATTTGTAGAGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACATTCGGTTCACTGTTGTATTATATTGGAAATGGGGGCAGTAACAAATGAACGAGTACACCCGCCACCGGACTTTGGAATCAGATTTGCTTGTGTTGAAGTTAAAACTATTA  ]
[-] EMBL CB678804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAATTTTGGAT GACCGATTATT TTCCCCCCTTACCTGCCTACACACAAAAGGCAGAGCTTAC AGCAAGTAACGATCATTTGTAGAGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACATTCGGTTCACTGTTGTATTATATTGGAAATGGGGGCAGTAACAAATGAACGAGTACACCCGCCACCGGACTTTGGAATCAGATTTGCTTGTGTTGAAATTAAAACTATTAAG]
[+] EMBL BM038298             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  acCAAGTAAT CCCCTATCC CCCAGATGGCCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTT TCGCCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTCCAAGC CAGAATAACCTCGCAC CCTATATAGACCTGTGTTAAGAGGCATAGAGA CAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAATTTTGGATCGACCGATTATTGTTCCCCCCNTACCNGCCTACACACAAAAGGCAGAGCTTACAAGCAAGTAACGATCATTTGTAGAGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACATTCGGTTCACTGTTGCATTATATTGGAAAT GGGGCAGTAACAAATGAACGAGTACACCCGCCAGCGGACTTTGGAATCAaaa                             ]




>consensus_11608#0
TTCTTCCCCTTCTCTTCTCCGGGCATCACAGGATCGAGGCGATACCGGAGGAGCCCCCGC
CATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGCCGACCGG
TTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTG
GAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCC
GCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGA
GTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCC
AAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAG
CGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCC
GCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAG
GAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTA
AATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCA
AATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAA
GAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAA
CAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAG
AAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAA
TTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCAT
GATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATT
GATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCA
TACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAG
CAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTG
AAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCG
CCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGA
TCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAA
GCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTA
ATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAATTTTGGATGACCGATTATTTT
CCCCCCTTACCTGCCTACACACAAAAGGCAGAGCTTACAGCAAGTAACGATCATTTGTAG
AGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACATTCGGTTCACTGTTGTATTA
TATTGGAAATGGGGGCAGTAACAAATGAACGAGTACACCCGCCACCGGACTTTGGAATCA
GATTTGCTTGTGTTGAAGTTAAAACTATTAAG

consensusID : consensus_11608#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 578
fasta sequence

                              [TCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGGAGGTGTTTGATGCTGCCTTCCTTTTCTTTGAACAAAATAAGTTCCCAATGAGCTGGCTAAGTTTTGGATTGTGTTTGACAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTA]

[+] EMBL CF303827             [TCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGGAGGTGTTTGATGCTGCCTTCCTTTTCTTTGAACAAAATAAGTTCCCAATGAGCTGGCTAAGTTTTGGATTGTGTTTGACAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTA]




>consensus_11608#1
TCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAG
CAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGG
CAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAA
AAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCT
GAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTG
CATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGGA
GGTGTTTGATGCTGCCTTCCTTTTCTTTGAACAAAATAAGTTCCCAATGAGCTGGCTAAG
TTTTGGATTGTGTTTGACAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGG
AGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAA
ACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11608#0      TTCTTCCCCTTCTCTTCTCCGGGCATCACAGGATCGAGGCGATACCGGAGGAGCCCCCGC 60
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      CATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGCCGACCGG 120
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      TTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTG 180
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      GAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCC 240
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      GCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGA 300
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      GTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCC 360
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      AAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAG 420
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      CGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCC 480
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      GCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAG 540
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      GAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTA 600
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      AATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCA 660
consensus_11608#1      ---------------------------------------------------------TCA 3
                                                                                ***

consensus_11608#0      AATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAA 720
consensus_11608#1      AATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAA 63
                       ************************************************************

consensus_11608#0      GAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAA 780
consensus_11608#1      GAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAA 123
                       ************************************************************

consensus_11608#0      CAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAG 840
consensus_11608#1      CAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAG 183
                       ************************************************************

consensus_11608#0      AAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAA 900
consensus_11608#1      AAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAA 243
                       ************************************************************

consensus_11608#0      TTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCAT 960
consensus_11608#1      TTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCAT 303
                       ************************************************************

consensus_11608#0      GATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGG----- 1015
consensus_11608#1      GATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGGAGGT 363
                       *******************************************************     

consensus_11608#0      ------------------------------------------------------------
consensus_11608#1      GTTTGATGCTGCCTTCCTTTTCTTTGAACAAAATAAGTTCCCAATGAGCTGGCTAAGTTT 423
                                                                                   

consensus_11608#0      ---------------AGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGA 1060
consensus_11608#1      TGGATTGTGTTTGACAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGA 483
                                      *********************************************

consensus_11608#0      ACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACC 1120
consensus_11608#1      ACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACC 543
                       ************************************************************

consensus_11608#0      AGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGAC 1180
consensus_11608#1      AGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTA------------------------- 578
                       ***********************************                         

consensus_11608#0      TTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACG 1240
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      AGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGC 1300
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      TCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTG 1360
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      AACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAA 1420
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      GAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAAT 1480
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      TTTGGATGACCGATTATTTTCCCCCCTTACCTGCCTACACACAAAAGGCAGAGCTTACAG 1540
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      CAAGTAACGATCATTTGTAGAGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACA 1600
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      TTCGGTTCACTGTTGTATTATATTGGAAATGGGGGCAGTAACAAATGAACGAGTACACCC 1660
consensus_11608#1      ------------------------------------------------------------
                                                                                   

consensus_11608#0      GCCACCGGACTTTGGAATCAGATTTGCTTGTGTTGAAGTTAAAACTATTAAG 1712
consensus_11608#1      ----------------------------------------------------