cluster # 11609

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Oryza sativa
cluster # 11609 cluster # 11609 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11609#0 length = 1903 sequences # 6
consensus_11609#1 length = 1684 sequences # 1

consensus_11609#2 length = 684 sequences # 1
consensus_11609#3 length = 293 sequences # 1

consensusID : consensus_11609#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1903
fasta sequence

                              [CTTTCCTCTCTTCCTCATCCGCTCTCTCTCTCTCTCGTCGTCGACCGCCGCCGTCTGTCGCCGGAGTGGGGGCCATGGCCCCTGTGAAGGCTGAGGAGCTGGTGGCGTTCGTCCCCAAGGAGCAGTACGACGGCGTCGACTACTGCATCACCAGCCCGCCGCCATGGCTGACGGCGGTGCTGTTGGCGTTCCAGCACTACCTCGTCATGCTCGGCACCACCGTCATCGTCGCCACCATCCTCGTGCCCCTCATGGGCGGCGGCCATGTGGAGAAGGCGATCGTGGTGCAGACCATCCTGTTCCTCGCCGGGATCAACACGCTGCTGCAGGTGCACCTCGGGACGCGGCTCCCCGCCGTCATGGGCGCCTCCTACGCCTACATCTACCCGGCCGTCGCCATCATCCTAAGCCCTCGCTTCGCCATCGTCGTCGACCCCTTCGAGAGGTTCGTGTACACGATGAGGTCGCTGCAGGGCGCGCTGATCATCGCCGGCGTCGTCCAGGCCATCATCGGGTTCTTCGGAATCTGGAGGATCTTCATAAGGTTCCTGAGCCCACTCGCGGCGGTTCCGTTCGTGACGCTGTCCGCGCTCGGCCTCTTCTACTTCGCCTTCCCCGGAGTCGCCAAGTGCATCGAGGTCGGCCTCCCGGCGCTCATCCTGCTCCTGCTCTTCACCGAGTACGCGGCGCATTTCTTCGCGAGGGGGAGCTTCCTGTTCGGGCGGTGCGCCGTGCTGGCGACGGTGCTCGTCGTGTGGATCTACGCCGAGATCCTCACGGCGGCCGGCGCCTACAACGAGAGGTCCCTCGTGACGCAGTTCAGCTGCCGCGCCGACCGATCGGGGCTCATCCATGGCGCACCCTGGGTCAGGTTCCCTTACCCGTTCCAGTGGGGGTACCCCATCTTCTTCGCCGACGATTGCTTCGTCATGATCGCTGCCTCTTTCGTCTCACTGATCGAGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCCGCCTTCAGTTTTCGCTCGTGGAGTTGGCTGGCAGGGCATATCTACCATTCTGGACGGGATGTGTGGTACATTGACAGGGTCAGTAGCTTCAGTTGAGAATGCAGGTCTGTTGGCCTTGACGCGAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGTTCGGGAAATTTGGGGCAATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCGTTCTCTTCGCTTATTCAGCT-GCTGCAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAACACA-CTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATC-TGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAAAAAATGTCAACTTGGGGGGGGGGATTCAGGGGCCTGGATGATCCTGCCATTGATTTTGATTTGGTTTTTGATCTCTGATCCAATTTGAACAGCAGAAGAATAG]

[+] EMBL AK100981             [CTTTCCTCTCTTCCTCATCCGCTCTCTCTCTCTCTCGTCGTCGACCGCCGCCGTCTGTCGCCGGAGTGGGGGCCATGGCCCCTGTGAAGGCTGAGGAGCTGGTGGCGTTCGTCCCCAAGGAGCAGTACGACGGCGTCGACTACTGCATCACCAGCCCGCCGCCATGGCTGACGGCGGTGCTGTTGGCGTTCCAGCACTACCTCGTCATGCTCGGCACCACCGTCATCGTCGCCACCATCCTCGTGCCCCTCATGGGCGGCGGCCATGTGGAGAAGGCGATCGTGGTGCAGACCATCCTGTTCCTCGCCGGGATCAACACGCTGCTGCAGGTGCACCTCGGGACGCGGCTCCCCGCCGTCATGGGCGCCTCCTACGCCTACATCTACCCGGCCGTCGCCATCATCCTAAGCCCTCGCTTCGCCATCGTCGTCGACCCCTTCGAGAGGTTCGTGTACACGATGAGGTCGCTGCAGGGCGCGCTGATCATCGCCGGCGTCGTCCAGGCCATCATCGGGTTCTTCGGAATCTGGAGGATCTTCATAAGGTTCCTGAGCCCACTCGCGGCGGTTCCGTTCGTGACGCTGTCCGCGCTCGGCCTCTTCTACTTCGCCTTCCCCGGAGTCGCCAAGTGCATCGAGGTCGGCCTCCCGGCGCTCATCCTGCTCCTGCTCTTCACCGAGTACGCGGCGCATTTCTTCGCGAGGGGGAGCTTCCTGTTCGGGCGGTGCGCCGTGCTGGCGACGGTGCTCGTCGTGTGGATCTACGCCGAGATCCTCACGGCGGCCGGCGCCTACAACGAGAGGTCCCTCGTGACGCAGTTCAGCTGCCGCGCCGACCGATCGGGGCTCATCCATGGCGCACCCTGGGTCAGGTTCCCTTACCCGTTCCAGTGGGGGTACCCCATCTTCTTCGCCGACGATTGCTTCGTCATGATCGCTGCCTCTTTCGTCTCACTGATCGAGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCCGCCTTCAGTTTTCGCTCGTGGAGTTGGCTGGCAGGGCATATCTACCATTCTGGACGGGATGTGTGGTACATTGACAGGGTCAGTAGCTTCAGTTGAGAATGCAGGTCTGTTGGCCTTGACGCGAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGTTCGGGAAATTTGGGGCAATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCGTTCTCTTCGCTTATTCAGCT GCTGCAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAACACA CTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATC TGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTATTACCTCTGTCAACTTGGGGGGGGGGATTCAGGGGCCTGGATGATCCTGCCATTGATTTTGATTTGGTTTTTGATCTCTGATCCAATTTGAACAGCAGAAGAATAG]
[+] EMBL BI796382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCTCTGCCCTGTACTGCGTTCTCTTCGCTTATTCATCTCGCT CA GGCTCTGCTTCCTCCAGTACTGCAACCTCAACACA CTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGT GCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATC TGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAAAAA                                                                                                    ]
[+] EMBL BI796862             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAACACAGCTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATC TGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGC AAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAAAAAA                                                                                                   ]
[+] EMBL OSC131               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCTTCAGCAAGTACTTCCCTTCGTTCTAGGNCAAAGGATNGCGAGAGGTAGAAGACGATGCAATCATCTTGGAGCCTT                                                                                                                                                                                                     ]
[+] EMBL AU091900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGNTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATC TGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAAAAA                                                                                                    ]
[+] EMBL BI799645             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTCCTCGCCTGCGACGGT GCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCT CCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTA GCCAAAGGATGGCGAGAGGTAGAAGACGATCCAATCATC TGGACCCTTTAGCTTCACTGCTGTGGCTGTT CAT CAAACCATTTTGGATATGAGATTTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAAAAAAaaaa                                                                                               ]




>consensus_11609#0
CTTTCCTCTCTTCCTCATCCGCTCTCTCTCTCTCTCGTCGTCGACCGCCGCCGTCTGTCG
CCGGAGTGGGGGCCATGGCCCCTGTGAAGGCTGAGGAGCTGGTGGCGTTCGTCCCCAAGG
AGCAGTACGACGGCGTCGACTACTGCATCACCAGCCCGCCGCCATGGCTGACGGCGGTGC
TGTTGGCGTTCCAGCACTACCTCGTCATGCTCGGCACCACCGTCATCGTCGCCACCATCC
TCGTGCCCCTCATGGGCGGCGGCCATGTGGAGAAGGCGATCGTGGTGCAGACCATCCTGT
TCCTCGCCGGGATCAACACGCTGCTGCAGGTGCACCTCGGGACGCGGCTCCCCGCCGTCA
TGGGCGCCTCCTACGCCTACATCTACCCGGCCGTCGCCATCATCCTAAGCCCTCGCTTCG
CCATCGTCGTCGACCCCTTCGAGAGGTTCGTGTACACGATGAGGTCGCTGCAGGGCGCGC
TGATCATCGCCGGCGTCGTCCAGGCCATCATCGGGTTCTTCGGAATCTGGAGGATCTTCA
TAAGGTTCCTGAGCCCACTCGCGGCGGTTCCGTTCGTGACGCTGTCCGCGCTCGGCCTCT
TCTACTTCGCCTTCCCCGGAGTCGCCAAGTGCATCGAGGTCGGCCTCCCGGCGCTCATCC
TGCTCCTGCTCTTCACCGAGTACGCGGCGCATTTCTTCGCGAGGGGGAGCTTCCTGTTCG
GGCGGTGCGCCGTGCTGGCGACGGTGCTCGTCGTGTGGATCTACGCCGAGATCCTCACGG
CGGCCGGCGCCTACAACGAGAGGTCCCTCGTGACGCAGTTCAGCTGCCGCGCCGACCGAT
CGGGGCTCATCCATGGCGCACCCTGGGTCAGGTTCCCTTACCCGTTCCAGTGGGGGTACC
CCATCTTCTTCGCCGACGATTGCTTCGTCATGATCGCTGCCTCTTTCGTCTCACTGATCG
AGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCCGCCTT
CAGTTTTCGCTCGTGGAGTTGGCTGGCAGGGCATATCTACCATTCTGGACGGGATGTGTG
GTACATTGACAGGGTCAGTAGCTTCAGTTGAGAATGCAGGTCTGTTGGCCTTGACGCGAG
TCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGTTCG
GGAAATTTGGGGCAATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCG
TTCTCTTCGCTTATTCAGCTGCTGCAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAACA
CACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGT
ACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTT
TCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCT
ACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCC
ATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTC
TGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAG
AAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAAGCA
TTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAA
AAAATGTCAACTTGGGGGGGGGGATTCAGGGGCCTGGATGATCCTGCCATTGATTTTGAT
TTGGTTTTTGATCTCTGATCCAATTTGAACAGCAGAAGAATAG

consensusID : consensus_11609#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1684
fasta sequence

                              [TAGATGTCTACATTAGTTGAGTTCCTAATCATTGATTTGTCACAAACATGTCTTCAAAACACTGGGGATTTGGTGAGAAGTTTCTACTTGTAAGTCTGACGAGGAATTCTGGTCGATTTCAGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCCGCCTTCAGTTTTCGCTCGTGGAGTTGGCTGGCAGGTACTGAAAATAACAGAAACTTTCAGTAATTCTCACTGAGTTTTTCTGCAGAACGAACGCTCACTGCACTGCAACCTGGGCAATTTCAGGGCATATCTACCATTCTGGACGGGATGTGTGGTACATTGACAGGATCAGTAGCTTCAGTGTAAAGCACTCAGCTCTCTTAGAACCTTACCTAGACTTCCACTTAGAAGGATGGAAATAACTTGTCCTTGTATTGCTTGAGAAGTGAGAATGCAGGTCTGTTGGCCTTGACGCGAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGTTCGGTATGATTTCCCATCATTCAGAATCTATCAGCAGTGTTCACCATTGCATTGTTAGCAACTCCACATTATCTGATTCTGATACAATGAGATGCCGGAAAATCAACAGGGAAATTTGGGGCAATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCGTTCTCTTCGCTTATTCAGGTGAGCCTTCATGATACCATCACTAATAAATTCAAGAGATCATTCATGGCCGAATGCATGATCTATGATGTAGAGGCTGGAATGAATTCATTATGGAAAATTAATATTCCGGAAGACTTACACTTGGTTTCTGCATGAGACAGCTGCTGCAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTGTACGTGAACCAACCCAGCTCTGAATCTCTGTTCTCTGATTGCATCAAGATCATGGCCGTTTTACTTTTCTGAATGTTTCTGAATTCTGATGATACAACATCTTTCCTTTTGCAGTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTCTGTCAACTTGGGGGGGGGGATTCAGGGGCCTGGATGATCCTGCCATTGATTTTGATTTGGTTTTTAATCTCTGATCCAATTTGAACAGCAGAAGAATAGTAAACCTGCCAATGATCAAATGAGTTCCTCAACTAGAAATCATAATCGGTTGGAATTCGTCCCAAATTCCAGTTCATTTCGATTGCAATTAGAGCCCATTAGGAAACACACGATTTACACAATAATTATACATGATTCTAACCGAAATCTGCTAAATTCCCG]

[-] EMBL AK110834             [TAGATGTCTACATTAGTTGAGTTCCTAATCATTGATTTGTCACAAACATGTCTTCAAAACACTGGGGATTTGGTGAGAAGTTTCTACTTGTAAGTCTGACGAGGAATTCTGGTCGATTTCAGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCCGCCTTCAGTTTTCGCTCGTGGAGTTGGCTGGCAGGTACTGAAAATAACAGAAACTTTCAGTAATTCTCACTGAGTTTTTCTGCAGAACGAACGCTCACTGCACTGCAACCTGGGCAATTTCAGGGCATATCTACCATTCTGGACGGGATGTGTGGTACATTGACAGGATCAGTAGCTTCAGTGTAAAGCACTCAGCTCTCTTAGAACCTTACCTAGACTTCCACTTAGAAGGATGGAAATAACTTGTCCTTGTATTGCTTGAGAAGTGAGAATGCAGGTCTGTTGGCCTTGACGCGAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGTTCGGTATGATTTCCCATCATTCAGAATCTATCAGCAGTGTTCACCATTGCATTGTTAGCAACTCCACATTATCTGATTCTGATACAATGAGATGCCGGAAAATCAACAGGGAAATTTGGGGCAATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCGTTCTCTTCGCTTATTCAGGTGAGCCTTCATGATACCATCACTAATAAATTCAAGAGATCATTCATGGCCGAATGCATGATCTATGATGTAGAGGCTGGAATGAATTCATTATGGAAAATTAATATTCCGGAAGACTTACACTTGGTTTCTGCATGAGACAGCTGCTGCAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTGTACGTGAACCAACCCAGCTCTGAATCTCTGTTCTCTGATTGCATCAAGATCATGGCCGTTTTACTTTTCTGAATGTTTCTGAATTCTGATGATACAACATCTTTCCTTTTGCAGTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTCTGTCAACTTGGGGGGGGGGATTCAGGGGCCTGGATGATCCTGCCATTGATTTTGATTTGGTTTTTAATCTCTGATCCAATTTGAACAGCAGAAGAATAGTAAACCTGCCAATGATCAAATGAGTTCCTCAACTAGAAATCATAATCGGTTGGAATTCGTCCCAAATTCCAGTTCATTTCGATTGCAATTAGAGCCCATTAGGAAACACACGATTTACACAATAATTATACATGATTCTAACCGAAATCTGCTAAATTCCCG]




>consensus_11609#1
TAGATGTCTACATTAGTTGAGTTCCTAATCATTGATTTGTCACAAACATGTCTTCAAAAC
ACTGGGGATTTGGTGAGAAGTTTCTACTTGTAAGTCTGACGAGGAATTCTGGTCGATTTC
AGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCCGCCTT
CAGTTTTCGCTCGTGGAGTTGGCTGGCAGGTACTGAAAATAACAGAAACTTTCAGTAATT
CTCACTGAGTTTTTCTGCAGAACGAACGCTCACTGCACTGCAACCTGGGCAATTTCAGGG
CATATCTACCATTCTGGACGGGATGTGTGGTACATTGACAGGATCAGTAGCTTCAGTGTA
AAGCACTCAGCTCTCTTAGAACCTTACCTAGACTTCCACTTAGAAGGATGGAAATAACTT
GTCCTTGTATTGCTTGAGAAGTGAGAATGCAGGTCTGTTGGCCTTGACGCGAGTCGGAAG
CAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGTTCGGTATGAT
TTCCCATCATTCAGAATCTATCAGCAGTGTTCACCATTGCATTGTTAGCAACTCCACATT
ATCTGATTCTGATACAATGAGATGCCGGAAAATCAACAGGGAAATTTGGGGCAATCATTG
CATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCGTTCTCTTCGCTTATTCAGGTG
AGCCTTCATGATACCATCACTAATAAATTCAAGAGATCATTCATGGCCGAATGCATGATC
TATGATGTAGAGGCTGGAATGAATTCATTATGGAAAATTAATATTCCGGAAGACTTACAC
TTGGTTTCTGCATGAGACAGCTGCTGCAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAA
CACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACA
GTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGC
TGTACGTGAACCAACCCAGCTCTGAATCTCTGTTCTCTGATTGCATCAAGATCATGGCCG
TTTTACTTTTCTGAATGTTTCTGAATTCTGATGATACAACATCTTTCCTTTTGCAGTTCA
ATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACC
TCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATT
GGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGC
CGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCGAGAGGTAGAAG
ACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTCTGTCAACTTGGGGGGGG
GGATTCAGGGGCCTGGATGATCCTGCCATTGATTTTGATTTGGTTTTTAATCTCTGATCC
AATTTGAACAGCAGAAGAATAGTAAACCTGCCAATGATCAAATGAGTTCCTCAACTAGAA
ATCATAATCGGTTGGAATTCGTCCCAAATTCCAGTTCATTTCGATTGCAATTAGAGCCCA
TTAGGAAACACACGATTTACACAATAATTATACATGATTCTAACCGAAATCTGCTAAATT
CCCG

consensusID : consensus_11609#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 684
fasta sequence

                              [GAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATTTTCTTCTCGCTGTTCGGGAAATNTGGGGCAATCATTGCATCAATCCCATTGCCAATTTTCTTTGCACTGTANTGCGTTCTCTTCGCTTACTCAGNTGCTGCAGGGCTNTGCTTCCTCCAGTACTGCAATCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTTTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTTTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTTATTGTCAACGTGATTTTCTCCTTGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTTTTACAGGCATGACCCGAGGAGCGAGGAGTTTTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTTTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA762797             [GAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATTTTCTTCTCGCTGTTCGGGAAATNTGGGGCAATCATTGCATCAATCCCATTGCCAATTTTCTTTGCACTGTANTGCGTTCTCTTCGCTTACTCAGNTGCTGCAGGGCTNTGCTTCCTCCAGTACTGCAATCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTTTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTTTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTTATTGTCAACGTGATTTTCTCCTTGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTTTTACAGGCATGACCCGAGGAGCGAGGAGTTTTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTTTAGGCCAAAGGATGGCGAGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11609#2
GAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATTTTCTTCTCGCTGT
TCGGGAAATNTGGGGCAATCATTGCATCAATCCCATTGCCAATTTTCTTTGCACTGTANT
GCGTTCTCTTCGCTTACTCAGNTGCTGCAGGGCTNTGCTTCCTCCAGTACTGCAATCTCA
ACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTTTTGGGCCTGTCCATCCCAC
AGTACTTCAGGGAGTACGAGGTGTTTTACGTCTTCGGGCCAGTTCACACCCACTCACCCG
CTTTCAATGTTATTGTCAACGTGATTTTCTCCTTGCCTGCGACGGTGGCCGCCATCCTCG
CCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCT
TCCATTGGTGGGAGAAGTTCAAGTTTTACAGGCATGACCCGAGGAGCGAGGAGTTTTACT
CTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTTTAGGCCAAAGGATGGCGAGAGG
TAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCATGCAAA
GCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGATGGTA
AAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_11609#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 293
fasta sequence

                              [GTTTCGGCACGAGCATCATGCAAATTTAAAAGCCATTGATGTGTGATAAGGTGGCAAATATGGACCATCCGGCTCCATGAGCGATAACTGAAGGCGGGCAGAACGTTGCCCCTGCATATCTCGTCACCGCCATCAACGTGCCCGTAGACTGAAATCGACCAGAATTCCTCGTCAGACTTACAAGTAGAAACTTCTCACCAAATCCCCAGTGTTTTGAAGACATGTTTGTGACAAATCAATGATTAGGAACTCAACTAATGTAGACATCTATCTGGTAATGAAAATTACTGATT]

[+] EMBL AA751785             [GTTTCGGCACGAGCATCATGCAAATTTAAAAGCCATTGATGTGTGATAAGGTGGCAAATATGGACCATCCGGCTCCATGAGCGATAACTGAAGGCGGGCAGAACGTTGCCCCTGCATATCTCGTCACCGCCATCAACGTGCCCGTAGACTGAAATCGACCAGAATTCCTCGTCAGACTTACAAGTAGAAACTTCTCACCAAATCCCCAGTGTTTTGAAGACATGTTTGTGACAAATCAATGATTAGGAACTCAACTAATGTAGACATCTATCTGGTAATGAAAATTACTGATT]




>consensus_11609#3
GTTTCGGCACGAGCATCATGCAAATTTAAAAGCCATTGATGTGTGATAAGGTGGCAAATA
TGGACCATCCGGCTCCATGAGCGATAACTGAAGGCGGGCAGAACGTTGCCCCTGCATATC
TCGTCACCGCCATCAACGTGCCCGTAGACTGAAATCGACCAGAATTCCTCGTCAGACTTA
CAAGTAGAAACTTCTCACCAAATCCCCAGTGTTTTGAAGACATGTTTGTGACAAATCAAT
GATTAGGAACTCAACTAATGTAGACATCTATCTGGTAATGAAAATTACTGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11609#0      CTTTCCTCTCTTCCTCATCCGCTCTCTCTCTCTCTCGTCGTCGACCGCCGCCGTCTGTCG 60
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ------------------------------------------------------------
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      CCGGAGTGGGGGCCATGGCCCCTGTGAAGGCTGAGGAGCTGGTGGCGTTCGTCCCCAAGG 120
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ------------------------------------------------------------
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      AGCAGTACGACGGCGTCGACTACTGCATCACCAGCCCGCCGCCATGGCTGACGGCGGTGC 180
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ------------------------------------------------------------
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TGTTGGCGTTCCAGCACTACCTCGTCATGCTCGGCACCACCGTCATCGTCGCCACCATCC 240
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ------------------------------------------------------------
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TCGTGCCCCTCATGGGCGGCGGCCATGTGGAGAAGGCGATCGTGGTGCAGACCATCCTGT 300
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ------------------------------------------------------------
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TCCTCGCCGGGATCAACACGCTGCTGCAGGTGCACCTCGGGACGCGGCTCCCCGCCGTCA 360
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ------------------------------------------------------------
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TGGGCGCCTCCTACGCCTACATCTACCCGGCCGTCGCCATCATCCTAAGCCCTCGCTTCG 420
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ------------------------------------------------------------
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      CCATCGTCGTCGACCCCTTCGAGAGGTTCGTGTACACGATGAGGTCGCTGCAGGGCGCGC 480
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ---TAGATGTCTACA--TTAGTTGAGTTCCTAATCATTGATTTGTCACAAACATGTCTTC 55
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TGATCATCGCCGGCGTCGTCCAGGCCATCATCGGGTTCTTCGGAATCTGGAGGATCTTCA 540
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      AAAACACTGGGGATTTGGTGAGAAGTTTCTACTTGTAAGTCTGACGAGGAATTCTGGTCG 115
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      --TAAGGTTCCTGAGCCCACTCGCGGCGGTTCCGTTCGTGACGCTGTCCGCGCTCGGCCT 598
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ATTTCAGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCC 175
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      CTTCTACTTCGCCTTCCCCGGAGTCGCCAAGT--GCATCGAGGTCGGCCTC--CCGGCGC 654
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      GCCTTCAGTTTTCGCTCGTGGAGTTGGCTGGCAGGTACTGAAAATAACAGAAACTTTCAG 235
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TCATCCTGCTCCTGCTCTTCACCGAGTACGCGGCGCATTTCTTCGCGAGGGGGAGCTTCC 714
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      TAATTCTCACTGAGTTTTTCTGCAGAACGAACGCTCACTGCACTGCAACCTGGGCAATTT 295
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TGTTCGGGCGGTGCGCCGTGCTGGCGACGGTGCTCGTCGTGTGGATCTACGCCGAGATCC 774
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      CA--GGGCATATCTACCATTCTGGACGGGATGTGTGGTACATTGA-CAGGATCAGTAGCT 352
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TCACGGCGGCCGGCGCCTACAACGAGAGGTCCCTCGTGACGCAGTTCAGCTGCCGCGCCG 834
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      TCA--GTGTAAAGCACTCAGCTCTCTTAGAACCTTACCTAGACTTCCACTTAGAAGGATG 410
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      ACCGATCGGGGCTCATCCATGGCGCACCCTGGGTCAGGTTCCCTTACCCGTTCCAGTGGG 894
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      GAAATAACTTGTCCTTGTATTGCTTGAGAAGTGAGAATGCAGGTCTGTTGGCCTTGACGC 470
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      GGTACCCCATCTTCTTCGCCGACGATTGCTTCGTCATGATCGCTGCCTCTTTCGTCTCAC 954
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      GAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGT 530
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      T-GATCGAGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTT--CT 1011
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      TCGGTATGATTTCCCATCATTCAGAATCTATCAGCAGTGTTCACCATTGCATTGTTAGCA 590
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      GCCCGCCTTCAGTTTTCGCTCGTGGAGTTGGCTGGCAGGGCAT-ATCTACCATTCTGGAC 1070
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      ACTCCACATTATCTGATTCTGATACAATGAGATGCCGGAAAATCAACAGGGAAATTTGGG 650
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      GGGATGTGTGGTACATTGACAGGGTCAGTAGCTTCAGTTGAGAATGCAGGTCTGTTGGCC 1130
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      GCAATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCGTTCTCTTCGCT 710
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      T--TGACGCGAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCC--TTGTTCATGATCTT 1186
consensus_11609#2      ---------GAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCC--TTGTTCATGATTTT 49
consensus_11609#1      TATTCAGGTGAGCCTTCATGATACCATCACTAATAAATTCAAGAGATCATTCATGGCCGA 770
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      CTTCTCGCTGTTCGGGAAATTTGGGGCAATCATTGCATCAATCCCATTGCCAATCTTCTC 1246
consensus_11609#2      CTTCTCGCTGTTCGGGAAATNTGGGGCAATCATTGCATCAATCCCATTGCCAATTTTCTT 109
consensus_11609#1      ATGCATGATCTATGATGTAGAGGCTGGAATGAATTCATTA--TGGAAAATTAATATTCCG 828
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TGCACTGTACTGCGTTCTCTTCGCTT-ATTCAGCTGCTGCAGGGCTCTGCTTCCTCCAGT 1305
consensus_11609#2      TGCACTGTANTGCGTTCTCTTCGCTT-ACTCAGNTGCTGCAGGGCTNTGCTTCCTCCAGT 168
consensus_11609#1      GAAGACTTAC-ACTTGGTTTCTGCATGAGACAGCTGCTGCAGGGCTCTGCTTCCTCCAGT 887
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      ACTGCAACCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCC 1365
consensus_11609#2      ACTGCAATCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTTTTGGGCC 228
consensus_11609#1      ACTGCAACCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCC 947
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACA 1425
consensus_11609#2      TGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTTTACGTCTTCGGGCCAGTTCACA 288
consensus_11609#1      TGTCCATCCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACA 1007
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      CCCACTCACCCGCT---------------------------------------------- 1439
consensus_11609#2      CCCACTCACCCGCT---------------------------------------------- 302
consensus_11609#1      CCCACTCACCCGCTGTACGTGAACCAACCCAGCTCTGAATCTCTGTTCTCTGATTGCATC 1067
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      ------------------------------------------------------------
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      AAGATCATGGCCGTTTTACTTTTCTGAATGTTTCTGAATTCTGATGATACAACATCTTTC 1127
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      ---------TTCAATGTCATCGTCAACGTGATCTT----CTCCTCGCCTGCGACGGTGGC 1486
consensus_11609#2      ---------TTCAATGTTATTGTCAACGTGATTTT----CTCCTTGCCTGCGACGGTGGC 349
consensus_11609#1      CTTTTGCAGTTCAATGTCATCGTCAACGTGATCTT----CTCCTCGCCTGCGACGGTGGC 1183
consensus_11609#3      -------GTTTCGGCACGAGCATCATGCAAATTTAAAAGCCATTGATGTGTGATAA-GGT 52
                                ***      *   ***     ** *     *   *    ** **    ** 

consensus_11609#0      CGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAA 1546
consensus_11609#2      CGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAA 409
consensus_11609#1      CGCCATCCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAA 1243
consensus_11609#3      GGCAAATATGGACCATCC----GGCTCCATGAGCGATAACTGAAGGCGGGCAGAACGTTG 108
                        ** *   * * * * *     * ** ** *  *    ****     *  * *   *   

consensus_11609#0      GGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGA 1606
consensus_11609#2      GGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTTTTACAGGCATGACCCGAGGAGCGA 469
consensus_11609#1      GGACAGGGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGA 1303
consensus_11609#3      CCCCTGCATATCTCGTCACCGCCATCAACGTG---CCCGTAGACTGAAATCGACCAGAAT 165
                          * *    *  * *    *  *  *             ** *   *  ***  **   

consensus_11609#0      GGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGG 1666
consensus_11609#2      GGAGTTTTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTTTAGGCCAAAGG 529
consensus_11609#1      GGAGTTCTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGG 1363
consensus_11609#3      TCCTCGTCAGACTTACAAGTAGAAACTTCTCACCAAATCCCCAGTGTTTT-GAAGACATG 224
                               *  **     ***    **   **   * * ***   *** * *   * * *

consensus_11609#0      ATGGCGAGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTG 1726
consensus_11609#2      ATGGCGAGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTG 589
consensus_11609#1      ATGGCGAGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTC 1423
consensus_11609#3      TTTGTGACAAATCAATGATTAGGAACTCAACTAATGTAGACATCTATCTGGTAATGAAAA 284
                        * * ** *  *  * **  * * * *** **   *     * **     *   **    

consensus_11609#0      TTGCAT------GCAAAGCATTTTGGATATGAGATGTTG-------TGGATCTAATGAAA 1773
consensus_11609#2      TTGCAT------GCAAAGCATTTTGGATATGAGATGTTG-------TGGATCTAATGAAA 636
consensus_11609#1      TGTCAACTTGGGGGGGGGGATTCAGGGGCCTGGATGATCCTGCCATTGATTTTGATTTGG 1483
consensus_11609#3      TTACTGATT--------------------------------------------------- 293
                       *  *                                                        

consensus_11609#0      TG---AAACTTAGA---ATTTTGGATGGTAAAAAAAATGTCAACTTGGGGGGGGGGATTC 1827
consensus_11609#2      TG---AAACTTAGA---ATTTTGGATGGTAAAAAAAAAAAAAAAAAAAAAAAAA------ 684
consensus_11609#1      TTTTTAATCTCTGATCCAATTTGAACAGCAGAAGAATAGTAAACCTGCCAATGATCAAAT 1543
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      AGGGGCCTGGAT--GATCCTGCCATTGATTTTGATTTGGTTTTTGATCTCTGATCCAATT 1885
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      GAGTTCCTCAACTAGAAATCATAATCGGTTGGAATTCG--TCCCAAATTCCAGTTCATTT 1601
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      TGAACAGCAGAAGAATAG------------------------------------------ 1903
consensus_11609#2      ------------------------------------------------------------
consensus_11609#1      CGATTGCAATTAGAGCCCATTAGGAAACACACGATTTACACAATAATTATACATGATTCT 1661
consensus_11609#3      ------------------------------------------------------------
                                                                                   

consensus_11609#0      -----------------------
consensus_11609#2      -----------------------
consensus_11609#1      AACCGAAATCTGCTAAATTCCCG 1684
consensus_11609#3      -----------------------