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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2122 fasta sequence
[CATTATTACTACTCCGGTCGAGGCCAACGGCGGCGGCGCCACTGTCCCTCTCCCTCTAGCTCCGCCCTCCAATCCCCCGCCACCCACCGATGATACCCCGTCTACACCGTGCCATTGCCCGCCGATCACTGCTAACCTCCACCGCCCTCCTCCCCGCCGTCGCCCGCCACCGCGATGCGCCGCTGCCCTCCGCCCCCGGCCTCCCCCGTCTGCTCCACCACGCGCCGGGGGCGTCCGATCAAGCCCGGAAATCAGGTCCTCTTACGCTCTACAGGGATCTGGTGAGCCAAGGGAAACTCCAACATGACATCTACCAGGAAAATGTAGCAACTCAGCTGGACAACTTACTTAGACGACTTGAGCAATACGAGATGGAAATGGAGGATTACCATGCAAGACTCTCTATGTGGGAAAATACCCGGGAGAAACAAAGGCGAAGGCTTCTTGTTCAAGAAGCTGAGGATAAACAGCGTGATGGGGTGTGGATAGATGAGAAAAGGGGGTTTCTTGACAAGTTAGTGTCAAGGAAAAGAAGAGGAAATATAGAACCTGGAGTTGGGAAATGGGTCTCATATTTGAACCGAGAAAAGAAACTGGATACCTTGGTTGGCCAGAAGCCTGTTGCACCCATTGCTCCGAAAGGAATATATCTTTACGGCAATGTTGGAAGTGGAAAGACAATGCTGATGGACATGTTCTATGGGGCCACAGAAGGTCTTATCAAGCACAGGAGGAGATTCCACTTTCACGAGGCTATGCTTGAAATACATGATCATATGCATGATGTATGGAAGAGACGTGATGAGGACAAGTCTATTGAGTCGAGTGCTTTCAGTTGGATATCAAGCCTCCCTTTTGATGGGAAAATTAAGGAGTGGCTAATTGGGGAAGAGAAGTACAAACAAAATACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATATAACTAGACAAACAGGAGGAAACATTATTTCTGTCACCATTCCAGTAATGTTTGGGAGGTATCTTGAGATTCCTAAAAGTTGCAATGGAGTGGCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGAAAGCACTAATAAGATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGTGATTCGAGCAATTGCGTCGCACATATTCTTATGACTTCCTAATTCCTATCCAATTATGCTCAAGGT]
[+] EMBL AK102145 [CATTATTACTACTCCGGTCGAGGCCAACGGCGGCGGCGCCACTGTCCCTCTCCCTCTAGCTCCGCCCTCCAATCCCCCGCCACCCACCGATGATACCCCGTCTACACCGTGCCATTGCCCGCCGATCACTGCTAACCTCCACCGCCCTCCTCCCCGCCGTCGCCCGCCACCGCGATGCGCCGCTGCCCTCCGCCCCCGGCCTCCCCCGTCTGCTCCACCACGCGCCGGGGGCGTCCGATCAAGCCCGGAAATCAGGTCCTCTTACGCTCTACAGGGATCTGGTGAGCCAAGGGAAACTCCAACATGACATCTACCAGGAAAATGTAGCAACTCAGCTGGACAACTTACTTAGACGACTTGAGCAATACGAGATGGAAATGGAGGATTACCATGCAAGACTCTCTATGTGGGAAAATACCCGGGAGAAACAAAGGCGAAGGCTTCTTGTTCAAGAAGCTGAGGATAAACAGCGTGATGGGGTGTGGATAGATGAGAAAAGGGGGTTTCTTGACAAGTTAGTGTCAAGGAAAAGAAGAGGAAATATAGAACCTGGAGTTGGGAAATGGGTCTCATATTTGAACCGAGAAAAGAAACTGGATACCTTGGTTGGCCAGAAGCCTGTTGCACCCATTGCTCCGAAAGGAATATATCTTTACGGCAATGTTGGAAGTGGAAAGACAATGCTGATGGACATGTTCTATGGGGCCACAGAAGGTCTTATCAAGCACAGGAGGAGATTCCACTTTCACGAGGCTATGCTTGAAATACATGATCATATGCATGATGTATGGAAGAGACGTGATGAGGACAAGTCTATTGAGTCGAGTGCTTTCAGTTGGATATCAAGCCTCCCTTTTGATGGGAAAATTAAGGAGTGGCTAATTGGGGAAGAGAAGTACAAACAAAATACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCT TTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATATAACTAGACAAACAGGAGGAAACATTATTTCTGTCACCATTCCAGTAATGTTTGGGAGGTATCTTGAGATTCCTAAAAGTTGCAATGGAGTGGCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGGAAGCACTAATAAGATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGTGATTCGAGCAATTGCGTCGCACATATTCTT ]
[+] EMBL CF196535 [ AGGCTTCTTGTTCAAGAAGCTGAGGATAAACAGCGTGATGGGGTGTGGATAGATGAGAAAAGGGGGTTTCTTGACAAGTTAGTGTCAAGGAAAAGAAGAGGAAATATAGAACCTGGAGTTGGGAAATGGGTCTCATATTTGAACCGAGAAAAGAAACTGGATACCTTGGTTGGCCAGAAGCCTGTTGCACCCATTGCTCCGAAAGGAATATATCTTTACGGCAATGTTGGAAGTGGAAAGACAATGTTGATGGACATGTTCTATGGGGCCACAGAAGGTCTTATCAAGCACAGGAGGAGATTCCACTTTCACGAGGCTATGCTTGAAATACATGATCATATGCATGATGTATGGAAGAGACGTGATGAGGACAAGTCTATTGAGTCGAGTGCTTTCAGTTGGATATCAAGCCTCCCTTTCGATGGGAAAATTAAGGAGTGGCTAATTGGGGAAGAGAAGTACAAACAAAATACACAACAAAAGCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGNNNTACNGACNATCGATGTA ]
[+] EMBL AK059105 [ GGCAATGTTGGAAGTGGAAAGACAATGCTGATGGACATGTTCTATGGGGCCACAGAAGGTCTTATCAAGCACAGGAGGAGATTCCACTTTCACGAGGCTATGCTTGAAATACATGATCATATGCATGATGTATGGAAGAGACGTGATGAGGACAAGTCTATTGAGTCGAGTGCTTTCAGTTGGATATCAAGCCTCCCTTTTGATGGGAAAATTAAGGAGTGGCTAATTGGGGAAGAGAAGTACAAACAAAATACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATATAACTAGACAAACAGGAGGAAACATTATTTCTGTCACCATTCCAGTAATGTTTGGGAGGTATCTTGAGATTCCTAAAAGTTGCAATGGAGTGGCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGAAAGCACTAATAAGATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGTGATTCGAGCAATTGCGTCGCACATATTCTTATGACTTCCTAATTCCTATCCAATTATGCTCAAGGT]
[+] EMBL CA882871 [ ATACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATATAACTAGACAAACAGGAGGAAACATTATTTCTGTCACCATTCCAGTAATGTTTGGGAGGTATCTTGAGATTCCTAAAAGTTGCAATGGAGTGGCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATG ]
[-] EMBL CB663827 [ TGGAGTGGCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATGGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCCTATTGATGAGCTGTGCAATCATCACTGCCGTCTCGTATGTGTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCTTTCTCCTACAGGCGTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGTGATATCCCGTTTCATAGAAATGCAGACCTCACTGTATTTGGAGCGCGTCGAGTGTGTGCACTCATCCCTCCAACAGCAGAGTTGGGTTTTTACAAAGAGCAGCACTGTTTCGCAGTATGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGGGGAAAAAATTGTGGAAAGCTCTAATAAGATTGGAGAACCTCCTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGTGATTCGAGCAATT ]
[+] EMBL BQ907838 [ TGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCC ACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGAAAGCACTAATAAGATTGGAGAACCTACTT CCGTCTGTACAATGCACTGAACCGTAC AAACATAAGTGATTCGA CCATTGCGTCNCACATAaaa ]
consensusID : consensus_11629#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 795 fasta sequence
[TAGTATCCATCCTTTAAACCGTCTAAACTTGGAACTGAATTCTATTGTTATATACAGGAGTATTTGTTATTTTGAGCTGGGATCATGTGATATATTGCAGCTCATTATATAATCCACTGTTTATTTTAATTATCAGGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGAAAGCACTAATAAGATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGAGGTTCGAGCAATTGCGTCGCACATATTCTTATGACTTCC]
[-] EMBL CB669502 [TAGTATCCATCCTTTAAACCGTCTAAACTTGGAACTGAATTCTATTGTTATATACAGGAGTATTTGTTATTTTGAGCTGGGATCATGTGATATATTGCAGCTCATTATATAATCCACTGTTTATTTTAATTATCAGGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGAAAGCACTAATAAGATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGAGGTTCGAGCAATTGCGTCGCACATATTCTTATGACTT ]
[-] EMBL CB632024 [ GTTATTTTGAGCTGGGATCATGTGATATATTGCAGCTCATTATATAATCCACTGTTTATTTTAATTATCAGGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCTTATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGAAGGCACTAATAAGATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGTGATTAGGGCAATTGCGTCGCACATATTCTTATGACTTCC]
consensusID : consensus_11629#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 460 fasta sequence
[TACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGTACTTGATGCTGATGCCCATTAAAAAAAAGTTCAATCTCAGTTCTTTCTGTACTATGAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATA]
[+] EMBL CB663826 [TACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGTACTTGATGCTGATGCCCATTAAAAAAAAGTTCAATCTCAGTTCTTTCTGTACTATGAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11629#0 CATTATTACTACTCCGGTCGAGGCCAACGGCGGCGGCGCCACTGTCCCTCTCCCTCTAGC 60
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 TCCGCCCTCCAATCCCCCGCCACCCACCGATGATACCCCGTCTACACCGTGCCATTGCCC 120
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 GCCGATCACTGCTAACCTCCACCGCCCTCCTCCCCGCCGTCGCCCGCCACCGCGATGCGC 180
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 CGCTGCCCTCCGCCCCCGGCCTCCCCCGTCTGCTCCACCACGCGCCGGGGGCGTCCGATC 240
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 AAGCCCGGAAATCAGGTCCTCTTACGCTCTACAGGGATCTGGTGAGCCAAGGGAAACTCC 300
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 AACATGACATCTACCAGGAAAATGTAGCAACTCAGCTGGACAACTTACTTAGACGACTTG 360
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 AGCAATACGAGATGGAAATGGAGGATTACCATGCAAGACTCTCTATGTGGGAAAATACCC 420
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 GGGAGAAACAAAGGCGAAGGCTTCTTGTTCAAGAAGCTGAGGATAAACAGCGTGATGGGG 480
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 TGTGGATAGATGAGAAAAGGGGGTTTCTTGACAAGTTAGTGTCAAGGAAAAGAAGAGGAA 540
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 ATATAGAACCTGGAGTTGGGAAATGGGTCTCATATTTGAACCGAGAAAAGAAACTGGATA 600
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 CCTTGGTTGGCCAGAAGCCTGTTGCACCCATTGCTCCGAAAGGAATATATCTTTACGGCA 660
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 ATGTTGGAAGTGGAAAGACAATGCTGATGGACATGTTCTATGGGGCCACAGAAGGTCTTA 720
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 TCAAGCACAGGAGGAGATTCCACTTTCACGAGGCTATGCTTGAAATACATGATCATATGC 780
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 ATGATGTATGGAAGAGACGTGATGAGGACAAGTCTATTGAGTCGAGTGCTTTCAGTTGGA 840
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 -------------------------------------TAGTATCCATCCTTTAAACCGTC 23
consensus_11629#0 TATCAAGCCTCCCTTTTGATGGGAAAATTAAGGAGTGGCTAATTGGGGAAGAGAAGTACA 900
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 TAAACTTGGAACTGAATTCTATTGTTATATACAGGAGTATTTGTTATTTTGAGCTGGGAT 83
consensus_11629#0 AACAAAATACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGA-- 958
consensus_11629#2 -------TACACAACAAAACCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGA-- 51
consensus_11629#1 CATGTGATATATTGCAGCTCATTATATAATCCACTGTTTATTTTAATTATCAGGTTGGAG 143
** * ** * *** * **** * ** * ** ****
consensus_11629#0 ---TAGACAAGCAAATAAGAGT--GGAGCAAGCATTCTATGCTTTGACGAGATA---CAG 1010
consensus_11629#2 ---TAGACAAGCAAATAAGAGT--GGAGCAAGCATTCTATGCTTTGACGAGATA---CAG 103
consensus_11629#1 CTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAG 203
**** * * ** ** *** * * *** * ** * * **** ***
consensus_11629#0 ------------------------------------------------------------
consensus_11629#2 TACTTGATGCTGATGCCCATTAAAAAA----AAGTTCAATCTCAGTTCTTTCTGTACTAT 159
consensus_11629#1 CTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCT 263
consensus_11629#0 ---ACAATCGATGTA--TTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAA 1065
consensus_11629#2 GAGACAATCGATGTA--TTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAA 217
consensus_11629#1 ACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAG 323
* *** ** *** * ***** ** *** ** *
consensus_11629#0 GCAC------AGGAACTGTGCTTGTTTCGA-------CCAGTAATAAAGC--ACCTGAAG 1110
consensus_11629#2 GCAC------AGGAACTGTGCTTGTTTCGA-------CCAGTAATAAAGC--ACCTGAAG 262
consensus_11629#1 GAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAG 383
* ** **** ** * *** * * **** ** * * ******
consensus_11629#0 ATCTGAA--TCAGGATGGGATGCAGCGG--GAAATTTTCCTTGACTTATTGTCTAAGTTG 1166
consensus_11629#2 ATCTGAA--TCAGGATGGGATGCAGCGG--GAAATTTTCCTTGACTTATTGTCTAAGTTG 318
consensus_11629#1 GGGCAAAGCTTAGGA-GGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTC-TCC 441
** * **** ****** * *** * *** * * ** *
consensus_11629#0 GACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTA-ATTCC 1225
consensus_11629#2 GACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTA-ATTCC 377
consensus_11629#1 TACAGGCCTAGTGGCAA---TTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGC 498
** * * *** * **** * * ** **** * ** * * *
consensus_11629#0 AACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCT----CACTTCTGACATTCGGA 1281
consensus_11629#2 AACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCT----CACTTCTGACATTCGGA 433
consensus_11629#1 GATATCCCGTCTCATAGAAATGCAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCA 558
* * * * * * ** ** ** * *** * * ** * * * *
consensus_11629#0 GT-ATGTATGAGGCTATGTGGCACGATATAACTAGACAAACAGGAGGAAACATTATTTCT 1340
consensus_11629#2 GT-ATGTATGAGGCTATGTGGCACGATA-------------------------------- 460
consensus_11629#1 CTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGC 618
* ** * * * ** *
consensus_11629#0 GTCACCATTCCAGTAATGTTTGGGAGGTATCTTGAGATTCCTAAAAGTTGCAATGGAGTG 1400
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 TCCGTCCGTTTGACAGACGAGACCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAA 678
consensus_11629#0 GCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTTGGAGCTGCAGACTATATAGCA 1460
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 AAATTGTCGAAAGCACTAATAAGATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGA 738
consensus_11629#0 ATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATT 1520
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ACCGTACAAAACATAAGAGGTTCGAGCAATTGCGTCGCACATATTCTTATGACTTCC--- 795
consensus_11629#0 CGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGT 1580
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 CTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCT 1640
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 CTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGG 1700
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 GATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATT 1760
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 TTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATG 1820
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 CAGACCTCACTGTATCTGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGT 1880
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 TCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGACAGACGAGA 1940
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 CCCTTATAGTACCATTATTTCATTTCTTATCGTGGAAAAAATTGTCGAAAGCACTAATAA 2000
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 GATTGGAGAACCTACTTGCCGTCTGTACAATGCACTGAACCGTACAAAACATAAGTGATT 2060
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 CGAGCAATTGCGTCGCACATATTCTTATGACTTCCTAATTCCTATCCAATTATGCTCAAG 2120
consensus_11629#2 ------------------------------------------------------------
consensus_11629#1 ------------------------------------------------------------
consensus_11629#0 GT 2122
consensus_11629#2 --
consensus_11629#1 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||