cluster # 11637

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11637 cluster # 11637 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11637#0 length = 871 sequences # 9
consensusID : consensus_11637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 871
fasta sequence
                              [ATCCATCGATTTCTAGCTTAGCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCATCTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGGCAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCGCCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGTGGGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGT-GGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTT-CAACTCCGGCGATGACACCAT-CCCTCTCACCGCTACCGGCACCCGCTACTTCATATGTGGCTTCAATGGCCATT-GCACCGGA-GGGATGAA-GGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGG-CCCCATCACCGATGACCCCTCGTCCACGCACACCGACAGCAATGGCACCGAACGCAATGCCGCCAACGGCTGGTGGCCGGCCCGTGCCTCCATCTAACTCAGCAAGCCAGCCCGCT-GGTGTTGCATCTCTAGTTGGTCTTAGTTTGGGTGCCATAGTTGTTGGTCTCATGGCCTTCTAAATTAGAGTAAGAAGATACTTTGTGTATCTCTTCGAAGGCGATCGATTGATTGTGTTCGTATATATTGATTGCTTTGAGTATTTTCTCTGGTAGAGTCCGGCTCATATTGTTATTTATATGTAATATATTTTTTGTTATATGTAATTCATCAGCTCATTAATTATGATTTGATTCTATTGTTATATAAAAAA]

[+] EMBL CF319997             [ATCCATCGATTTCTAGCTTAGCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCATCTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGGCAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCGCCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGTGGGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGTGGGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTT CAACTCCGGCGATGACACCAT CCCTCTCACCGCTACCGGCACCCGCTACTTCATATGTGGCTTCAATGGCCATTGGCACCGGAGGGGATGAAGGGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGG CCCCATCACCGATGACCCCTCGTCC CGC CACCGAC GC ATGGCAC                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF314200             [ATCCATCGATTTCTAGCTTAGCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCATCTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGGCAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCGCCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGTGGGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGTGGGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTT CAACTCCGGCGATGACACCAT CCCTCTCACCGCTACCGGCACCCGCTACTTCATATGTGGCTTCAATGGCCATT GCACCGGA GGGATGAA GGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGG CCCCATCACCGATGACCCCTCGTCCACGCACACCGACAGCAATGGCACCGAGCGCAATGCCGCCAACGGCTGGTGGCCGGCCCGTGCCTCCATCTAACTCAGCAAGCCAGCCCGCTGGGTGTTGCAT                                                                                                                                                                                                                                                    ]
[+] EMBL CF335355             [ATCCATCGATTTCTAGCTTAGCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCATCTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGGCAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCGCCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF321316             [ATCCATCGATTTCTAGCTTAGCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCATCTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGGCAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCGCCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGTGGGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGT GGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTT CAACTCCGGCGATGACACCAT CCCTCTCACCGCTACCGGCACCCGCTACTTCATATGTGGCTTCAATGGCCATT GCACCGGA GGGATGAA GGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGG CCCCATCACCGATGACCCCTCGTCCACGCACACCGACAGCAATGGCACCGAACGCAATGCCGCCAACGGCTGGTGGCCGGCCCGTGCCTCCATCTAACTCAGC                                                                                                                                                                                                                                                                            ]
[+] EMBL AK063041             [ TCCATCGATTTCTAGCTTAGCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCATCTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGGCAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCGCCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGTGGGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGT GGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTT CAACTCCGGCGATGACACCAT CCCTCTCACCGCTACCGGCACCCGCTACTTCATATGTGGCTTCAATGGCCATT GCACCGGA GGGATGAA GGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGG CCCCATCACCGATGACCCCTCGTCCACGCACACCGACAGCAATGGCACCGAACGCAATGCCGCCAACGGCTGGTGGCCGGCCCGTGCCTCCATCTAACTCAGCAAGCCAGCCCGCT GGTGTTGCATCTCTAGTTGGTCTTAGTTTGGGTGCCATAGTTGTTGGTCTCATGGCCTTCTAAATTAGAGTAAGAAGATACTTTGTGTATCTCTTCGAAGGCGATCGATTGATTGTGTTCGTATATATTGATTGCTTTGAGTATTTTCTCTGGTAGAGTCCGGCTCATATTGTTATTTATATGTAATATATTTTTTGTTATATGTAATTCATCAGCTCATTAATTATGATTTGA                    ]
[+] EMBL CF319444             [        ATTTCTAGCTTATCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCATCTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGGCAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCGCCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGTGGGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGT GGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTT CAACTCCGGCGATGACACCAT CCCTCTCACCGCTACCGGCACCCGCTACTTCATATGTGGCTTCAATGGCCATT GCACCGGA GGGATGAA GGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGG CCCCATCACCGATGACCCCTCGTCCACGCACACCGACAGCAATGGCAC                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CF335356             [                                                                                                                                                                                                                                                 GGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGT GGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTTCCAACTCCGGCGATGACACCATCCCCTCTCACCGCTACCGGCACCCGNTACTTCATATGTGGCTTCAATGGCCATT GCACCGGA GGGATGAA GGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGGCCCCCATCACCGATGACCCCTCGTCCACGCACACCGACAGCAATGGCACCGAACGCAATGCCGCCAACGGCTGGTGGCCGGCCCGTGCCTCCATCTAACTCAGCAAGCCAGCCCGCT GGTGTTGCATCTCTAGTTGGTCTTAGTTTGGGTGCCATAGTTGTTGGTCTCATGGCCTTCTAAATTAGAGTAAGAAGATACTTTGTGTATCTCTTCGAAGGCGATCGATTGATTGTGTTCGTATATATTGATTGCTTTGAGTATTTTCTCTGGTAGAGTCCGGCTCATATTGTTATTTATATGTAATATATTTTTTGTTATATGTAATTCATCAGCTCATTAATTAaaaaa                       ]
[+] EMBL CB000979             [                                                                                                                                                                                                                                                                CTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGGCGCATGATGTGGT GGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTATCGCCACCTT CAACTCCGGCGATGACACCAT CCCTCTCACCGCTACCGGCACCCGCTACTTCATATGTGGCTTCAATGGCCATT GCACCGGA GGGATGAA GGTCGCTGTCAAGGTTGAGGCCGCCACCGGCAGCAACCCGG CCCCATCACCGATGACCCCTCGTCCACGCACACCGACAGCAATGGCACCGAACGCAATGCCGCCAACGGCTGGTGGCCGGCCCGTGCCTCCATCTAACTCAGCAAGCCAGCCCGCT GGTGTTGCATCTCTAGTTGGTCTTAGTTTGGGTGCCATAGTTGTTGGTCTCATGGCCTTCTAAATTAGAGTAAGAAGATACTTTGTGTATCTCTTCGAAGGCGATCGATTGATTGTGTTCGTATATATTGATTGCTTTGAGTATTTTCTCTGGTAGAGTCCGGCTCATATTGTTATTTATATGTAATATATTTTTTGTTATATGTAATTCATCAGCTCATTAATTAa                           ]
[-] EMBL CF314201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGGCCGGCCCGTGCCTCCATCTAACTCAGCAAGCCAGCCCGCT GGTGTTGCATCTCTAGTTGGTCTTAGTTTGGGTGCCATAGTTGTTGGTCTCATGGCCTTCTAAATTAGAGTAAGAAGATACTTTGTGTATCTCTTCGAAGGCGATCGATTGATTGTGTTCGTATATATTGATTGCTTTGAGTATTTTCTCTGGTAGAGTCCGGCTCATATTGTTATTTATATGTAATATATTTTTTGTTATATGTAATTCATCAGCTCATTAATTATGATTTGATTCTATTGTTATATAAAAAA]




>consensus_11637#0
ATCCATCGATTTCTAGCTTAGCTTCTACTGCCAATTGCTTGGAGATTGATCGACCATCAT
CTCCATCGATCCTCGAAGTCGATATATAGCTAATTGGACCATATTCCATGGCGATCATGG
CAGCCAGAGCTCTACTCGTCGTCGCCATGGCAGCAGCGGTGCTCGGAACGGCGCTCGGCG
CCACCTACACCGTCGGAGCTCCGAGCGGCTCATGGGACTTGAGGACTAACTATGACCAGT
GGGTTTCCAACATCAACTTTCGTGCCGGAGATCAGATAGTGTTCAAGTATTCTCCAGCGG
CGCATGATGTGGTGGAGGTGAACAAGGCCGACTACGACTCATGCTCCAGCTCCAGCCCTA
TCGCCACCTTCAACTCCGGCGATGACACCATCCCTCTCACCGCTACCGGCACCCGCTACT
TCATATGTGGCTTCAATGGCCATTGCACCGGAGGGATGAAGGTCGCTGTCAAGGTTGAGG
CCGCCACCGGCAGCAACCCGGCCCCATCACCGATGACCCCTCGTCCACGCACACCGACAG
CAATGGCACCGAACGCAATGCCGCCAACGGCTGGTGGCCGGCCCGTGCCTCCATCTAACT
CAGCAAGCCAGCCCGCTGGTGTTGCATCTCTAGTTGGTCTTAGTTTGGGTGCCATAGTTG
TTGGTCTCATGGCCTTCTAAATTAGAGTAAGAAGATACTTTGTGTATCTCTTCGAAGGCG
ATCGATTGATTGTGTTCGTATATATTGATTGCTTTGAGTATTTTCTCTGGTAGAGTCCGG
CTCATATTGTTATTTATATGTAATATATTTTTTGTTATATGTAATTCATCAGCTCATTAA
TTATGATTTGATTCTATTGTTATATAAAAAA
clustalw multiple alignements is not computed in this case