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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11638#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2768 fasta sequence
[CTTCTGACTTCTTTTGTGCTTCTTCCAAGCTTCCTTCCAGTCCTCGCTCTCGTCCTCCCTCCGTCACTCGCAGCGCAGACCAAGGAAGGCTTCTCGCCTCTCGCCTTCGCCTCGCTTCGCTTCCAAGTCCCAATGCCGACGCAACAGCTTACCTCACGCGGCGCGCCACGCGCTTGAGAGGGGCCGCCAACCGCATGGCGGCGCCGGGCCTGGACGAGGTCATGGCGTTCCTCACCGACCACGGGTTCGCGGGCGCCGCCTCCGCGCTCCGCGACGACGTCCTCGCCCGCGCCGCGTCCGCCGCCGGGGACGCCGGCTCCGATTCCGATGCCGCATTAGATCCCCAGCTCCCGCCCCTCCGGTTGCCGGCGTCCACGTCCGGAGGCGGTGGGGCGCCGGCGGCGCCGCCTGCAAGCCCTGGCTCCAGCTCTGACTCGGCGTCGTCCTCTGCCTTCGTCAGCATGCGCTCCTCGCCCTCAGGGATGCTGAATCCATATGGAGTCTGGTCGCCGCGGCACTCGGGCACGTCGTCATCGGAGATGGAGTTTGGCACAGCGCGTCAGTACGACGCCACCGACTTCTTTTTCCAAGAAGGTTGGCTTTACGACGACCATCTCTTCCATAGCAAGTCGGAGCTGGACGACGACAATGGAGAAGACAAAGAGGAGGACAAGTTTGTTCTTGGTGTCCACGATGGCTCAGGGAGGATAGAGATGGGAGTGCTTAGTGCCGGTGATGACCACCGTCATGAACATGTTGGCAATGACGGCTGTGAGGGATGTGCTGAGGTGTACACATGTTCATCACCGCTCTGCGGATGCTGTGGTGAGGGACTGAAGAACGGGGGGCTAGAGGTGGTGAAGGATTCTAGCTCCACTGTCTATGGGAGGTACCAGATCATTGATGACCAGACAGAGATACTTGATGAGTGTGGCATGGATGGGTTTCAGTTGAAGCACCCTGCGGATGTTGTGCTTGAGTGTCATTTGCCAAGAGATTCTGGGGAAGGAGATGAGCGATCGGAGCTGAGTGTAGTGGAGAAGGAGCTTCAAATGCTCAGTTCATTTGGTACTAGGGTTGATGCAGATGCTTTTACAAGTCCTGGACTTGTACACGATATCACAGACAATGCCAAACTGGATGATAGCATTGAAAAGAATATGAAAAACAGTAGCGACAAATATCTGAAGGAAGGTTATAGCATAGAGCCTTTCCCTGAGAGTTCTGTTGATGATACCTTTGAGTTTGGAGATATTGGACCATTGAATACTGATGCGCAAAACTCAGCTGCTGCTAAAGCTGAGGAAGGAAATCCAGAGACAAATGTTGATCTCGCTCTCGCTAATTTCCATCGAGAATATGAGGATTTGAACTGAGAATTGTCCACCGCAAGAACAGGACCGGCTTTGAAGTAAGCAAAGATTTCCCCATTGTCATAAATTCAGTTATAGCAGGAAGATATTATGTCACTGAATACCTTGGCTCAGCTGCATTCAGTAAAGTTGTGCAAGCACATGATCTTCAGACAGGAACTGATGTTTGCCTTAAAATAATTAAAAATGATAAGGATTTCTTTGATCAGAGTCTGGATGAGATCAAGCTTCTGAAGTTTGTGAACAAATACGATCCATTAGATGAGTATCATGTGTTGCGTCTCTATGACTATTTTTATCATCAGGAACACCTTTTTATTGTCACTGAATTACTGCGAGCAAATCTATATGAGTTCCAGAAATATAATCAGGAATCTGGTGGTGAAGCATACTTCACATTGCCTAGAATACAGGCAATAGCTCGGCAATGTTTAGAAGCCTTGGTATATTTGCATCATTTAAGGATCATTCATTGTGACCTGAAGCCTGAAAACATCCTTATCAAGAGCTACAGCAGATGTGAAATTAAGGTTATCGATCTTGGAAGTAGTTGCTTCTTGACAGACAACTTATGTCTCTATGTACAATCACGGTCATATCGAGCTCCTGAGGTCATTCTGGGGCTTCCTTATGATCAGAGGATTGATATTTGGTCTCTTGGTTGCATCCTTGCGGAACTCTACACTGGTGAGGTACTATTTCCTAATGAACCAGTGCCCATAATGCTTGCTCAAATGATTGGGATAATTGGCCCAATTGACATGGAAATGCTTGCCCTGGGAGAGGAGACGCAAAAGTATTTCACT-GATGATTACGACCTTTTCACCA-AGAATGAGGAAACAGATCAATTCGAGTATTTGATCCCAGAAAAGTCTTCTCTGCAGCATCACTTACAATGCCCTGATTCAGAGTTTGTTGATTTTCTATCCTATTTGCTGCAAATAAACCCCAGGAGAAGACCAACGGCAAGTGAAGCGCTACAACATCAATGGCTTTCATTTGCATACTAATGACTAATGAGAAACCAACAGGTCATTTCGTTTGTTTTAAGTGCTTTGTTCAACTGCTCCTAAGCTGGAT-CCCTGCAATCTTCTAAAGATGGATTGATTTTCTGATGTTTCCCCATGAGTCCATGACATGAAACAT-TT-TACACTTTCCTTGAGTTTTAGAAGGATTTACCTTTGTGCTTGCTGAACTAGCATGCGGCACAATTTTCTTGTTTCGTTTCTTCAGGGCAATTCTTGGAGTGGAAGCCCTGCTCTCAGTG-TTAAGATTCGTGAGTGTATGTAAATATGAGGAAATTTTCCTGTGTACATGTACAGTTGAAACACGGCTCTTGTAAGCCATCTGATTCATCTTTCATAACATAGTGAAAATATGAAATAATCATCCTGC]
[+] EMBL AK068489 [CTTCTGACTTCTTTTGTGCTTCTTCCAAGCTTCCTTCCAGTCCTCGCTCTCGTCCTCCCTCCGTCACTCGCAGCGCAGACCAAGGAAGGCTTCTCGCCTCTCGCCTTCGCCTCGCTTCGCTTCCAAGTCCCAATGCCGACGCAACAGCTTACCTCACGCGGCGCGCCACGCGCTTGAGAGGGGCCGCCAACCGCATGGCGGCGCCGGGCCTGGACGAGGTCATGGCGTTCCTCACCGACCACGGGTTCGCGGGCGCCGCCTCCGCGCTCCGCGACGACGTCCTCGCCCGCGCCGCGTCCGCCGCCGGGGACGCCGGCTCCGATTCCGATGCCGCATTAGATCCCCAGCTCCCGCCCCTCCGGTTGCCGGCGTCCACGTCCGGAGGCGGTGGGGCGCCGGCGGCGCCGCCTGCAAGCCCTGGCTCCAGCTCTGACTCGGCGTCGTCCTCTGCCTTCGTCAGCATGCGCTCCTCGCCCTCAGGGATGCTGAATCCATATGGAGTCTGGTCGCCGCGGCACTCGGGCACGTCGTCATCGGAGATGGAGTTTGGCACAGCGCGTCAGTACGACGCCACCGACTTCTTTTTCCAAGAAGGTTGGCTTTACGACGACCATCTCTTCCATAGCAAGTCGGAGCTGGACGACGACAATGGAGAAGACAAAGAGGAGGACAAGTTTGTTCTTGGTGTCCACGATGGCTCAGGGAGGATAGAGATGGGAGTGCTTAGTGCCGGTGATGACCACCGTCATGAACATGTTGGCAATGACGGCTGTGAGGGATGTGCTGAGGTGTACACATGTTCATCACCGCTCTGCGGATGCTGTGGTGAGGGACTGAAGAACGGGGGGCTAGAGGTGGTGAAGGATTCTAGCTCCACTGTCTATGGGAGGTACCAGATCATTGATGACCAGACAGAGATACTTGATGAGTGTGGCATGGATGGGTTTCAGTTGAAGCACCCTGCGGATGTTGTGCTTGAGTGTCATTTGCCAAGAGATTCTGGGGAAGGAGATGAGCGATCGGAGCTGAGTGTAGTGGAGAAGGAGCTTCAAATGCTCAGTTCATTTGGTACTAGGGTTGATGCAGATGCTTTTACAAGTCCTGGACTTGTACACGATATCACAGACAATGCCAAACTGGATGATAGCATTGAAAAGAATATGAAAAACAGTAGCGACAAATATCTGAAGGAAGGTTATAGCATAGAGCCTTTCCCTGAGAGTTCTGTTGATGATACCTTTGAGTTTGGAGATATTGGACCATTGAATACTGATGCGCAAAACTCAGCTGCTGCTAAAGCTGAGGAAGGAAATCCAGAGACAAATGTTGATCTCGCTCTCGCTAATTTCCATCGAGAATATGAGGATTTGAACTGAGAATTGTCCACCGCAAGAACAGGACCGGCTTTGAAGTAAGCAAAGATTTCCCCATTGTCATAAATTCAGTTATAGCAGGAAGATATTATGTCACTGAATACCTTGGCTCAGCTGCATTCAGTAAAGTTGTGCAAGCACATGATCTTCAGACAGGAACTGATGTTTGCCTTAAAATAATTAAAAATGATAAGGATTTCTTTGATCAGAGTCTGGATGAGATCAAGCTTCTGAAGTTTGTGAACAAATACGATCCATTAGATGAGTATCATGTGTTGCGTCTCTATGACTATTTTTATCATCAGGAACACCTTTTTATTGTCACTGAATTACTGCGAGCAAATCTATATGAGTTCCAGAAATATAATCAGGAATCTGGTGGTGAAGCATACTTCACATTGCCTAGAATACAGGCAATAGCTCGGCAATGTTTAGAAGCCTTGGTATATTTGCATCATTTAAGGATCATTCATTGTGACCTGAAGCCTGAAAACATCCTTATCAAGAGCTACAGCAGATGTGAAATTAAGGTTATCGATCTTGGAAGTAGTTGCTTCTTGACAGACAACTTATGTCTCTATGTACAATCACGGTCATATCGAGCTCCTGAGGTCATTCTGGGGCTTCCTTATGATCAGAGGATTGATATTTGGTCTCTTGGTTGCATCCTTGCGGAACTCTACACTGGTGAGGTACTATTTCCTAATGAACCAGTGCCCATAATGCTTGCTCAAATGATTGGGATAATTGGCCCAATTGACATGGAAATGCTTGCCCTGGGAGAGGAGACGCAAAAGTATTTCACT GATGATTACGACCTTTTCACCA AGAATGAGGAAACAGATCAATTCGAGTATTTGATCCCAGAAAAGTCTTCTCTGCAGCATCACTTACAATGCCCTGATTCAGAGTTTGTTGATTTTCTATCCTATTTGCTGCAAATAAACCCCAGGAGAAGACCAACGGCAAGTGAAGCGCTACAACATCAATGGCTTTCATTTGCATACTAATGACTAATGAGAAACCAACAGGTCATTTCGTTTGTTTTAAGTGCTTTGTTCAACTGCTCCTAAGCTGGAT CCCTGCAATCTTCTAAAGATGGATTGATTTTCTGATGTTTCCCCATGAGTCCATGACATGAAACAT TT TACACTTTCCTTGAGTTTTAGAAGGATTTACCTTTGTGCTTGCTGAACTAGCATGCGGCACAATTTTCTTGTTTCGTTTCTTCAGGGCAATTCTTGGAGTGGAAGCCCTGCTCTCAGTG TTAAGATTCGTGAGTGTATGTAAATATGAGGAAAT ]
[+] EMBL AU032357 [ TGTCACTGAATTACTGCGAGCAAATCTATATGAGTTCCAGAAATATAATCAGGAATCTGGTGGTGAAGCATACTTCACATTGCCTAGAATACAGGCAATAGCTCGGCAATGTTTAGAAGCCTTGGTATATTTGCATCATTTAAGGATCATTCATTGTGACCTGAAGCCTGAAAACATCCTTATCAAGAGCTACAGCAGATGTGAAATTAAGGTTATCGATCTTGGAAGTAGTTGCTTCTTGACAGACAACTTATGTCTCTATGTACAATCACGGTCATATCGAGCTCCTGAGGTCATTCTGGGGCTTCCTTATGATCAGAGGATTGATATTTGGTCNCTTGGTTGCATCCTTGCGGAACTCTACACTGGTGAGGNACTATTTCCTAATG ACCAGTGCCCATAATGCTTGCCCCAATGATTGGGA AATTGGCCCAATTG CCTGG ]
[+] EMBL BI805697 [ AGACGCAAAAGTATTTCACTGGATGATTACGACCTTTTCACCATAGAATGAGGAAACAGATCAATTCGAGTA TTGATCCCAGAAAAGTCTTCTCTGCAGCATCACTTACAATGCCCTGATTCAGAGTTTGTTGATTTTCTATCCTATTTGCTGCAAATAAACCCCAGGAGAAGACCAACGGCAAGTGAAGCGCTACAACATCAATGGCTTTCATTTGCATACTAATGACTAATGAGAAACCAACAGGTCATTTCGTTTGTTTTAAGTGCTTTGTTCAACTGCTCCTAAGCTGGATGCCCTGCAATCTTCTAAAGATGGATTGATTTTCTGATGTTTCCCCATGAGTCCATGACATGAAACATGTTNTACACTTTCCTTGAGTTTTAGAAGGATTTACCTTTGTGCTTGCTGAACTAGCATGCGGCACAATTTTCTTGTTTCGTTTCTTCAGGGCAATTCTTGGAGTGGAAGCCCTACTCTCAGTGTTTAAGATTCGTGAGTGTATGTAAATATGAGGAAATTTTCCTGTGTACATGTACAGTTGAAACACGGCTCTTGTAAGCCATCTGATTCATCTTTCATAACATAGTGAAAATATGAAATAATCATCCTGC]
consensusID : consensus_11638#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2071 fasta sequence
[GGCGTCACGAGCGCGAGTACGACACCACCGATCTCTTCTTCGGCGAGAATTGGCTCTACGACGACCACCTCTTCCACACCAATTCGGACGGCGACGAGGGCAATGGAGAGGACAAGTTCATCGTTGGCGCTGACTCTACCGCCCAGTGGAGCGAAACGCGTGAGCTCGACGATTGCGGCGGCCGCCACCAAGTGCACACGAAATCCAAGGCCGACGCTGAAGCCTGCGCGGAAGTGTATACCTGCTCTTCAGCGCCCTGCAGCTGCTGCTACGGAGGGAGGAAGAATGATGATGGGTTGACGAGGGATTCTTGCTCTGCTGTCTATGGGAGGTACCTGATCATGGATGACCAGACAGAGGTGCTGGATGAGTGTGGTGCAGATGCATTCCTGTTCACACGGGATGGAGATGCCATGCTCAAAAGTGAACAGCCAATTGATTCCAAAGGCGGAGATATCGAGTTGCTGGACATGAGTACGGTGGAGAAGGAGCTTCAGATGCTCAGTCCGTATTTGGCTGAGGCAGATGCTCTTGAGAAGGCTGAGCTTGAACACGATTTCAGCGGCAATGGGGAACTAGATATTAACGTTGTTACAAACGAGAAAACTGCCGATGACAAAGAACTTCTAAAAAATAGTTACAGCATACATTCTTTACCTGAGATAGGTGATCCTCTAGATGTTTATGAGATGGAGGACTTTGGACGAACAGATACAAGTGTTCAAAATTCTACAGCCAATAAAATCGCTGAAGATGCGAGAACAGATATTGATCTTGCACTTTCTAGATTTCATGAGGAATATGAGGTATTTGAGCTGAGAATTTTCCACCGGAAGAACAGGACTGGTTTTGAGGAAAACAAAGAGTTCCCTATTGTCATGAATTCAGTTGTAGGTGGAAGATATCGCATCACTGAGTATCTTGGCTCAGCTGCATTCAGCAAGGTTGTACGGGCACAGGATCTTTGGACGGGAATGGATGTCTGCCTGAAAATAATAAAAAATGACAAGGATTTCTTTGACCAGAGCTTGGACGAGATAAAGCTCCTTAAATTTGTAAACAAATACGATCCTGATGATGAACATCATATATTGCGCCTTTACGATTTTTTCTACTATCAGGAACATCTTTTCATTGTCACTGAATTGCTACGGGCGAATCTGTATGAATTTCAAAAATATAACCAAGAGTCTGGTGATGAAGTGTACTTCTCATTGCGCAGAATACAGGCTATAGCTCGACAATGCTTAGAAGCTCTGGTGTATTTGCATCATTTAAATATCGTTCACTGTGACCTTAAACCAGAGAATATCCTCATGAAGAGTTACAGCAGATGTGAAATTAAGGTTATTGATCTTGGAAGTAGTTGCTTCTTGACAGACAACTTAAGCTTATATGTCCAGTCACGTTCTTACAGAGCTCCTGAAGTCATTCTAGGTCTTCCATATGATCAGAAGATTGACATTTGGTCTCTCGGATGCATCTTGGCTGAACTGTACACTGGTGAAGTGCTCTTTCCAAATGAATCAGTACAAATAATTCTTGCTCGGATGATAGGGACAATTGGTCCAATTGACATGGAAATGCTTGCACTGGGACAAGATACCCAGAAGTACTTTACAGAAGACTACGACCTGTTCCACAAGAATGAGGAGACGGATCAGTTGGAGTACTTGATCCCAGAGAAGATTTCCTTGCGGCGTCGCTTGCAGTGCCCCGACACCAAATTTGTTAAATTTCTTTCCTACCTGTTACAAATCAACCCCAGAAAGAGACCAACAGCCAGTGAAGCATTGCAGCATCCGTGGCTCTCATATGCCTATCAGTGAGATGTCAACCAAATGTGTTTATACGGGATGGATCGTTTTTCTGAAGTTCCATTTGCACCAGGATTTGGCTTTTCCGTTTTTTTCAGGGCAGTCCTTGGTTAGCATCGAAACCCTGTTTTCCGAGATGAATGCAAACTTGCTCGTGCATGTAAATATGAGAAGAAGAAAAGGTTCCTTGTTGCATATATGTATAGCTGTCACTTTGATGTACTTCACCCAACTCATCAATAGAAATGTGTTTC]
[+] EMBL AK063502 [GGCGTCACGAGCGCGAGTACGACACCACCGATCTCTTCTTCGGCGAGAATTGGCTCTACGACGACCACCTCTTCCACACCAATTCGGACGGCGACGAGGGCAATGGAGAGGACAAGTTCATCGTTGGCGCTGACTCTACCGCCCAGTGGAGCGAAACGCGTGAGCTCGACGATTGCGGCGGCCGCCACCAAGTGCACACGAAATCCAAGGCCGACGCTGAAGCCTGCGCGGAAGTGTATACCTGCTCTTCAGCGCCCTGCAGCTGCTGCTACGGAGGGAGGAAGAATGATGATGGGTTGACGAGGGATTCTTGCTCTGCTGTCTATGGGAGGTACCTGATCATGGATGACCAGACAGAGGTGCTGGATGAGTGTGGTGCAGATGCATTCCTGTTCACACGGGATGGAGATGCCATGCTCAAAAGTGAACAGCCAATTGATTCCAAAGGCGGAGATATCGAGTTGCTGGACATGAGTACGGTGGAGAAGGAGCTTCAGATGCTCAGTCCGTATTTGGCTGAGGCAGATGCTCTTGAGAAGGCTGAGCTTGAACACGATTTCAGCGGCAATGGGGAACTAGATATTAACGTTGTTACAAACGAGAAAACTGCCGATGACAAAGAACTTCTAAAAAATAGTTACAGCATACATTCTTTACCTGAGATAGGTGATCCTCTAGATGTTTATGAGATGGAGGACTTTGGACGAACAGATACAAGTGTTCAAAATTCTACAGCCAATAAAATCGCTGAAGATGCGAGAACAGATATTGATCTTGCACTTTCTAGATTTCATGAGGAATATGAGGTATTTGAGCTGAGAATTTTCCACCGGAAGAACAGGACTGGTTTTGAGGAAAACAAAGAGTTCCCTATTGTCATGAATTCAGTTGTAGGTGGAAGATATCGCATCACTGAGTATCTTGGCTCAGCTGCATTCAGCAAGGTTGTACGGGCACAGGATCTTTGGACGGGAATGGATGTCTGCCTGAAAATAATAAAAAATGACAAGGATTTCTTTGACCAGAGCTTGGACGAGATAAAGCTCCTTAAATTTGTAAACAAATACGATCCTGATGATGAACATCATATATTGCGCCTTTACGATTTTTTCTACTATCAGGAACATCTTTTCATTGTCACTGAATTGCTACGGGCGAATCTGTATGAATTTCAAAAATATAACCAAGAGTCTGGTGATGAAGTGTACTTCTCATTGCGCAGAATACAGGCTATAGCTCGACAATGCTTAGAAGCTCTGGTGTATTTGCATCATTTAAATATCGTTCACTGTGACCTTAAACCAGAGAATATCCTCATGAAGAGTTACAGCAGATGTGAAATTAAGGTTATTGATCTTGGAAGTAGTTGCTTCTTGACAGACAACTTAAGCTTATATGTCCAGTCACGTTCTTACAGAGCTCCTGAAGTCATTCTAGGTCTTCCATATGATCAGAAGATTGACATTTGGTCTCTCGGATGCATCTTGGCTGAACTGTACACTGGTGAAGTGCTCTTTCCAAATGAATCAGTACAAATAATTCTTGCTCGGATGATAGGGACAATTGGTCCAATTGACATGGAAATGCTTGCACTGGGACAAGATACCCAGAAGTACTTTACAGAAGACTACGACCTGTTCCACAAGAATGAGGAGACGGATCAGTTGGAGTACTTGATCCCAGAGAAGATTTCCTTGCGGCGTCGCTTGCAGTGCCCCGACACCAAATTTGTTAAATTTCTTTCCTACCTGTTACAAATCAACCCCAGAAAGAGACCAACAGCCAGTGAAGCATTGCAGCATCCGTGGCTCTCATATGCCTATCAGTGAGATGTCAACCAAATGTGTTTATACGGGATGGATCGTTTTTCTGAAGTTCCATTTGCACCAGGATTTGGCTTTTCCGTTTTTTTCAGGGCAGTCCTTGGTTAGCATCGAAACCCTGTTTTCCGAGATGAATGCAAACTTGCTCGTGCATGTAAATATGAGAAGAAGAAAAGGTTCCTTGTTGCATATATGTATAGCTGTCACTTTGATGTACTTCACCCAACTCATCAATAGAAATGTGTTTC]
[+] EMBL CB683207 [ agagctttAGTTCATCGTTGGCGCTGACTCTACCGCCCAGTGGAGCGAAACGCGTGAGCTCGACGATTGCGGCGGCCGCCACCAAGTGCACACGAAATCCAAGGCCGACGCTGAAGCCTGCGCGGAAGTGTATACCTGCTCTTCAGCGCCCTGCAGCTGCTGCTACGGAGGGAGGAAGAATGATGATGGGTTGACGAGGGATTCTTGCTCTGCTGTCTATGGGAGGTACCTGATCATGGATGACCAGACAGAGGTGCTGGATGAGTGTGGTGCAGATGCATTCCTGTTCACACGGGATGGAGATGCCATGCTCAAAAGTGAACAGCCAATTGATTCCAAAGGCGGAGATATCGAGTTGCTGGACATGAGTACGGTGGAGAAGGAGCTTCAGATGCTCAGTCCGTATTTGGCTGAGGCAGATGCTCTTGAGAAGGCTGAGCTTGAACACGATTTCAGCGGCAATGGGGAACTAGATATTAACGTTGTTACAAACGAGAAAACTGCCGATGACAAAGAACTTCTAAAAAATAGTTACAGCATACATTCTTTACCTGAGATAGGTGATCCTCTAGATGTTTATGAGATGGAGGACTTTGGACGAACAGATACAAGTGTTCAAAATTCTACAGCCAATAAAATCGCTGAAGATGCGAGAACAGATATTGATCTTGCACTTTCTAGATTTCATGAGGAATATGAGGT ]
consensusID : consensus_11638#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 666 fasta sequence
[CTCCCGCCGGGGAGGGGTATTTTTCCATAAAAACCCCCGGCGCCCCAAAAAGCTCTCCCCAAAAATTTTGGGGAAAAATGGGCCCCCTTTTACCGAGAAAATCCCCCCCCCGGAGAGGGGACCCCCCAAAAGTTTTTCCCTGAAGTTTCCGCCCTTTTCCCCAAAAATAGGCCCATTCGGGTTTTTGATCCCAAAAAGTTTTTTTTTCCGCTTCCCTCTCACTGGGNNTTGATTAAAGAGGTTGGTGATTTTTCTTTCCCATTTGCCCAAATAAACCCCGGAAGAGCACCACGCCCAAAGTTAAAGCCCTTCCAACATCCAATGGGCTTTTATTTGCCATACTAAAGNCTAAATGAGNAACCACCAGGTCATTTCGTTTGTTTAAGTGCTTGTTCAACTGCTCCTAAGCTGGATCCCTGCAATCTTCTAAAGATGGATTGATTTCTGGATGTTTTCCCCCATGAGGTCCCAGTGNACCACTGNAAANCCATTTTACACTTTCCTTGAGTTTTAGAAGGATTTACCTTTGTGCTTGCTGAACTAGCATGCGGCACAATTTTCTTGTTTCGTTTCTTCAGGGCAATTCTTGGAGTGGAAGCCCTACTCTCAGTGTTAAGATTCGTGAGTGTATGTAAATATGAGGAAATTTTCCTGTGTAAAAAAAAA]
[-] EMBL CA760522 [CTCCCGCCGGGGAGGGGTATTTTTCCATAAAAACCCCCGGCGCCCCAAAAAGCTCTCCCCAAAAATTTTGGGGAAAAATGGGCCCCCTTTTACCGAGAAAATCCCCCCCCCGGAGAGGGGACCCCCCAAAAGTTTTTCCCTGAAGTTTCCGCCCTTTTCCCCAAAAATAGGCCCATTCGGGTTTTTGATCCCAAAAAGTTTTTTTTTCCGCTTCCCTCTCACTGGGNNTTGATTAAAGAGGTTGGTGATTTTTCTTTCCCATTTGCCCAAATAAACCCCGGAAGAGCACCACGCCCAAAGTTAAAGCCCTTCCAACATCCAATGGGCTTTTATTTGCCATACTAAAGNCTAAATGAGNAACCACCAGGTCATTTCGTTTGTTTAAGTGCTTGTTCAACTGCTCCTAAGCTGGATCCCTGCAATCTTCTAAAGATGGATTGATTTCTGGATGTTTTCCCCCATGAGGTCCCAGTGNACCACTGNAAANCCATTTTACACTTTCCTTGAGTTTTAGAAGGATTTACCTTTGTGCTTGCTGAACTAGCATGCGGCACAATTTTCTTGTTTCGTTTCTTCAGGGCAATTCTTGGAGTGGAAGCCCTACTCTCAGTGTTAAGATTCGTGAGTGTATGTAAATATGAGGAAATTTTCCTGTGTAAAAAAAAA]
consensusID : consensus_11638#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence
[GGCCCGGTTTTTTTTTTTTTTTTTTTTTTTGAACGAAGGCCTGAGTAAATTTTGGGGCACAAGGACTGGCTTTAATAAATATAGACCAATAAAAACGTTTTACTTGGAAACGAATAAGGTGCTTCAAGTTGTTTTGATGTTATCCATATGGAAACAAAGTTGTTTTAAAATTTAAAAAGGCTAATCGTCTAATTATAATTCCTAACTGGGACACATAACAGGGACTATTTCCTAATGAACCAGCGCCCATAAGGCTTGCTCAAATGATCGGTATAATTGGCCCAATTGACATGGAAATGCTTGCCCTGGGAGAGGAGACGCACAAGTATTTCACTGATAATTACAACCTTTTCACCAAGAATGAGGAAACAGATCACTTCGGGTATTTGATCCCAGAAAAGTCTTCTCTGCAGCATCACTTACAATGCCCTGATTCAAAGTTTGTTGATTTTCTATCCCATTTGCTGCAAATAAACCCCAGGAGAAAACCAACGGCAAGTGAAGCGCTACAACATCAATGGCTTTCATTTGCATACTAATGACTAATGAGAAACCAACAGGTCATTTCGTTTGTTTTAAGGGCTTTGTTCAACTGCTCCTAAGCTGGATCCCTGCAATCTTCTAAAGATGGATTGATTTTCTGATGTTTCCCCTTGTCTCGTCCT]
[+] EMBL CA763543 [GGCCCGGTTTTTTTTTTTTTTTTTTTTTTTGAACGAAGGCCTGAGTAAATTTTGGGGCACAAGGACTGGCTTTAATAAATATAGACCAATAAAAACGTTTTACTTGGAAACGAATAAGGTGCTTCAAGTTGTTTTGATGTTATCCATATGGAAACAAAGTTGTTTTAAAATTTAAAAAGGCTAATCGTCTAATTATAATTCCTAACTGGGACACATAACAGGGACTATTTCCTAATGAACCAGCGCCCATAAGGCTTGCTCAAATGATCGGTATAATTGGCCCAATTGACATGGAAATGCTTGCCCTGGGAGAGGAGACGCACAAGTATTTCACTGATAATTACAACCTTTTCACCAAGAATGAGGAAACAGATCACTTCGGGTATTTGATCCCAGAAAAGTCTTCTCTGCAGCATCACTTACAATGCCCTGATTCAAAGTTTGTTGATTTTCTATCCCATTTGCTGCAAATAAACCCCAGGAGAAAACCAACGGCAAGTGAAGCGCTACAACATCAATGGCTTTCATTTGCATACTAATGACTAATGAGAAACCAACAGGTCATTTCGTTTGTTTTAAGGGCTTTGTTCAACTGCTCCTAAGCTGGATCCCTGCAATCTTCTAAAGATGGATTGATTTTCTGATGTTTCCCCTTGTCTCGTCCT]
consensusID : consensus_11638#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 430 fasta sequence
[TCCGTTTGGTGTGTTGAAGTGGCTTTTGTGTCCAACTGCCTGCTCTTAAGCTCGGATNCCCTGGCAAATCTTGCTGAAAGATGCGGATTGATTTTGCTGGATGTTTGCCCCCTATGGAGTGCCATGACAATGGAAACAATGTGTGTGACAACTGTGTGCCTTGGAGTGTTGTGAGAAGGGATGTTGACCTGTTGGTGCTGTGGCTGAACTAGCATGCGGCACAATTTTCTTGTTTCAGTTTCTTCAGGGCAATTCTTGGAGTGGGAAGCCCTACTCTCAGTGTTAAGATTCGTGAGTGTATGTAAATATGAGGAAATGTTTCCTGTGTACATGTACACGTTGAAACAGGCTCTTGTAAGCCATCTGATTCATCTTTCATAACATAGTGAAAATATGAAATAACTCATCCTGCATTTCTTCAAAAAAAAAA]
[+] EMBL BQ906174 [TCCGTTTGGTGTGTTGAAGTGGCTTTTGTGTCCAACTGCCTGCTCTTAAGCTCGGATNCCCTGGCAAATCTTGCTGAAAGATGCGGATTGATTTTGCTGGATGTTTGCCCCCTATGGAGTGCCATGACAATGGAAACAATGTGTGTGACAACTGTGTGCCTTGGAGTGTTGTGAGAAGGGATGTTGACCTGTTGGTGCTGTGGCTGAACTAGCATGCGGCACAATTTTCTTGTTTCAGTTTCTTCAGGGCAATTCTTGGAGTGGGAAGCCCTACTCTCAGTGTTAAGATTCGTGAGTGTATGTAAATATGAGGAAATGTTTCCTGTGTACATGTACACGTTGAAACAGGCTCTTGTAAGCCATCTGATTCATCTTTCATAACATAGTGAAAATATGAAATAACTCATCCTGCATTTCTTCAAAAAAAAAA]
consensusID : consensus_11638#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 181 fasta sequence
[TCCTTGGAGTGGAAGCCCTGACTGCTGCAAGTGGTTGAAGATTGCAGTGGAGTGGTGATGTAAATATGAGGAAATTTTCCTGTGTACATGTACAGTTGAAACAGGCTCTTGTAAGCCATCTGATTCATCTTTCATAACATAGTGAAAATATGAAATAATCATCCGGCGTGTTCTTCAAAAA]
[+] EMBL BI812674 [TCCTTGGAGTGGAAGCCCTGACTGCTGCAAGTGGTTGAAGATTGCAGTGGAGTGGTGATGTAAATATGAGGAAATTTTCCTGTGTACATGTACAGTTGAAACAGGCTCTTGTAAGCCATCTGATTCATCTTTCATAACATAGTGAAAATATGAAATAATCATCCGGCGTGTTCTTCAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CTTCTGACTTCTTTTGTGCTTCTTCCAAGCTTCCTTCCAGTCCTCGCTCTCGTCCTCCCT 60
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CCGTCACTCGCAGCGCAGACCAAGGAAGGCTTCTCGCCTCTCGCCTTCGCCTCGCTTCGC 120
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TTCCAAGTCCCAATGCCGACGCAACAGCTTACCTCACGCGGCGCGCCACGCGCTTGAGAG 180
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 GGGCCGCCAACCGCATGGCGGCGCCGGGCCTGGACGAGGTCATGGCGTTCCTCACCGACC 240
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ACGGGTTCGCGGGCGCCGCCTCCGCGCTCCGCGACGACGTCCTCGCCCGCGCCGCGTCCG 300
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CCGCCGGGGACGCCGGCTCCGATTCCGATGCCGCATTAGATCCCCAGCTCCCGCCCCTCC 360
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 GGTTGCCGGCGTCCACGTCCGGAGGCGGTGGGGCGCCGGCGGCGCCGCCTGCAAGCCCTG 420
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 GCTCCAGCTCTGACTCGGCGTCGTCCTCTGCCTTCGTCAGCATGCGCTCCTCGCCCTCAG 480
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 GGATGCTGAATCCATATGGAGTCTGGTCGCCGCGGCACTCGGGCACGTCGTCATCGGAGA 540
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TGGAGTTTGGCACAGCGCGTCAGTACGACGCCACCGACTTCTTTTTCCAAGAAGGTTGGC 600
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TTTACGACGACCATCTCTTCCATAGCAAGTCGGAGCTGGACGACGACAATGGAGAAGACA 660
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 AAGAGGAGGACAAGTTTGTTCTTGGTGTCCACGATGGCTCAGGGAGGATAGAGATGGGAG 720
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TGCTTAGTGCCGGTGATGACCACCGTCATGAACATGTTGGCAATGACGGCTGTGAGGGAT 780
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 GTGCTGAGGTGTACACATGTTCATCACCGCTCTGCGGATGCTGTGGTGAGGGACTGAAGA 840
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ACGGGGGGCTAGAGGTGGTGAAGGATTCTAGCTCCACTGTCTATGGGAGGTACCAGATCA 900
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TTGATGACCAGACAGAGATACTTGATGAGTGTGGCATGGATGGGTTTCAGTTGAAGCACC 960
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CTGCGGATGTTGTGCTTGAGTGTCATTTGCCAAGAGATTCTGGGGAAGGAGATGAGCGAT 1020
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ------------------------------------------------------------
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CGGAGCTGAGTGTAGTGGAGAAGGAGCTTCAAATGCTCAGTTCATTTGGTACTAGGGTTG 1080
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ---------------------------GGCGTCACGAGCGCGAGTACGACACCACCGATC 33
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ATGCAGATGCTTTTACAAGTCCTGGACTTGTACACGATATCACAGACAATGCCAAACTGG 1140
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 TCTTCTTCGGCGAGAATTGGCTCTACGACGACCACCTCTTCCACACCAATTCGGACGGCG 93
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ATGATAGCATTGAAAAGAATATGAAAAACAGTAGCGACAAATATCTGAAGGAAGGTTATA 1200
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ACGAGGGCAATGGAGAGGACAAGTTCATCGTTGGCGCTGACTCTACCGCCCAGTGGAGCG 153
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 GCATAGAGCCTTTCCCTGAGAGTTCTGTTGATGATACCTTTGAGTTTGGAGATATTGGAC 1260
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 AAACGCGTGAGCTCGACGATTGCGGCGGCCGCCACCAAGTGCACACGAAATCCAAGGCCG 213
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CATTGAATACTGATGCGCAAAACTCAGCTGCTGCTAAAGCTGAGGAAGGAAATCCAGAGA 1320
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ACGCTGAAGCCTGCGCGGAAGTGTATACCTGCTCTTCAGCGCCCTGCAGCTGCTGCTACG 273
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CAAATGTTGATCTCGCTCTCGCTAATTTCCATCGAGAATATGAGGATTTGAACTGAGAAT 1380
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 GAGGGAGGAAGAATGATGATGGGTTGACGAGGGATTCTTGCTCTGCTGTCTATGGGAGGT 333
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TGTCCACCGCAAGAACAGGACCGGCTTTGAAGTAAGCAAAGATTTCCCCATTGTCATAAA 1440
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ACCTGATCATGGATGACCAGACAGAGGTGCTGGATGAGTGTGGTGCAGATGCATTCCTGT 393
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TTCAGTTATAGCAGGAAGATATTATGTCACTGAATACCTTGGCTCAGCTGCATTCAGTAA 1500
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 TCACACGGGATGGAGATGCCATGCTCAAAAGTGAACAGCCAATTGATTCCAAAGGCGGAG 453
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 AGTTGTGCAAGCACATGATCTTCAGACAGGAACTGATGTTTGCCTTAAAATAATTAAAAA 1560
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ATATCGAGTTGCTGGACATGAGTACGGTGGAGAAGGAGCTTCAGATGCTCAGTCCGTATT 513
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TGATAAGGATTTCTTTGATCAGAGTCTGGATGAGATCAAGCTTCTGAAGTTTGTGAACAA 1620
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 TGGCTGAGGCAGATGCTCTTGAGAAGGCTGAGCTTGAACACGATTTCAGCGGCAATGGGG 573
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ATACGATCCATTAGATGAGTATCATGTGTTGCGTCTCTATGACTATTTTTATCATCAGGA 1680
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 AACTAGATATTAACGTTGTTACAAACGAGAAAACTGCCGATGACAAAGAACTTCTAAAAA 633
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ACACCTTTTTATTGTCACTGAATTACTGCGAGCAAATCTATATGAGTTCCAGAAATATAA 1740
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ATAGTTACAGCATACATTCTTTACCTGAGATAGGTGATCCTCTAGATGTTTATGAGATGG 693
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TCAGGAATCTGGTGGTGAAGCATACTTCACATTGCCTAGAATACAGGCAATAGCTCGGCA 1800
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 AGGACTTTGGACGAACAGATACAAGTGTTCAAAATTCTACAGCCAATAAAATCGCTGAAG 753
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ATGTTTAGAAGCCTTGGTATATTTGCATCATTTAAGGATCATTCATTGTGACCTGAAGCC 1860
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ATGCGAGAACAGATATTGATCTTGCACTTTCTAGATTTCATGAGGAATATGAGGTATTTG 813
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TGAAAACATCCTTATCAAGAGCTACAGCAGATGTGAAATTAAGGTTATCGATCTTGGAAG 1920
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 AGCTGAGAATTTTCCACCGGAAGAACAGGACTGGTTTTGAGGAAAACAAAGAGTTCCCTA 873
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TAGTTGCTTCTTGACAGACAACTTATGTCTCTATGTACAATCACGGTCATATCGAGCTCC 1980
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 TTGTCATGAATTCAGTTGTAGGTGGAAGATATCGCATCACTGAGTATCTTGGCTCAGCTG 933
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TGAGGTCATTCTGGGGCTTCCTTATGATCAGAGGATTGATATTTGGTCTCTTGGTTGCAT 2040
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 CATTCAGCAAGGTTGTACGGGCACAGGATCTTTGGACGGGAATGGATGTCTGCCTGAAAA 993
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CCTTGCGGAACTCTACACTGGTGAGGTACTATTTCCTAATGAACCAGTGCCCATAATGCT 2100
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 TAATAAAAAATGACAAGGATTTCTTTGACCAGAGCTTGGACGAGATAAAGCTCCTTAAAT 1053
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 TGCTCAAATGATTGGGATAATTGGCCCAATTGACATGGAAATGCTTGCCCTGGGAGAGGA 2160
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 TTGTAAACAAATACGATCCTGATGATGAACATCATATATTGCGCCTTTACGATTTTTTCT 1113
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 GACGCAAAAGTATTTCACTGATGATTACGACCTTTTCACCAAGAATGAGGAAACAGATCA 2220
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 ACTATCAGGAACATCTTTTCATTGTCACTGAATTGCTACGGGCGAATCTGTATGAATTTC 1173
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ATTCGAGTATTTGATCCCAGAAAAGTCTTCTCTGCAGCATCACTTACAATGCCCTGATTC 2280
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 AAAAATATAACCAAGAGTCTGGTGATGAAGTGTACTTCTCATTGCGCAGAATACAGGCTA 1233
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 AGAGTTTGTTGATTTTCTATCCTATTTGCTGCAAATAAACCCCAGGAGAAGACCAACGGC 2340
consensus_11638#2 -----------------------------------CTCCCGCCGGGGAGGGGTATTTTTC 25
consensus_11638#3 ---------------------------------------------------GGCCCGGTT 9
consensus_11638#1 TAGCTCGACAATGCTTAGAAGCTCTGGTGTATTTGCATCATTTAAATATCGTTCACTGTG 1293
consensus_11638#4 ------------------TCCGTTTGGTGTGTTGAAGTGGCTTTTGTGTCCAACTGCCTG 42
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 AAGTGAAGCGCTACAACATCAATGGCTTTCATTTGCATACTAATGACTAATGAGAAACCA 2400
consensus_11638#2 CATAAAAACCCCCGGCGCCCCAAAAAGCTCTCCCCAAAAATTTTGGGGAAAAATGGGCCC 85
consensus_11638#3 TTTTTTTTTTTTTTTTTTTTTGAACGAAGGCCTGAGTAAATTTTGGGGCACAAGGACTGG 69
consensus_11638#1 ACCTTAAACCAGAGAATATCCTCATGAAGAGTTACAGCAGATGTGAAATTAAGGTTATTG 1353
consensus_11638#4 CTCT------TAAGCTCGGATNCCCTGGCAAATCTTGCTGAAAGATGCGGATTGATTTTG 96
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ACAG------GTCATTTCGTTTGTTTTAAGTGCTTTGTTCAACTGCTCCTAAGCTGGATC 2454
consensus_11638#2 CCTT------TTACCGAGAAAATCCCCCCCCCGGAGAGGGGACCCCCCAAAAGTTTTTCC 139
consensus_11638#3 CTTTAA----TAAATATAGACCAATAAAAACGTTTTACTTGGAAACGAATAAGGTGCTTC 125
consensus_11638#1 ATCTTGGAAGTAGTTGCTTCTTGACAGACAACTTAAGCTTATATGTCCAGTCACGTTCTT 1413
consensus_11638#4 CTGGATGTTTGCCCCCTATGGAGTGCCATGACAATGGAAACAATGTGTGTGACAACT--G 154
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 CCTGCAATCTTCTAAAGATGGATTGATTTTCTGATGTTTCCCCATGAGTCCATGACATGA 2514
consensus_11638#2 CTGAAGTTTCCGCCCTTTTCCCCAAAAATAGGCCCATTCGGGTTTTTGATCCCAAAAAGT 199
consensus_11638#3 AAGTTGTTTTGATGTTATCCATATGGAAACAAAGTTGTTTTAAAATTTAAAAAGGCTAAT 185
consensus_11638#1 ACAGAGCTCCTGAAGTCATTCTAGGTCTTCCATATGATCAGAAGATTGACATTTGGTC-T 1472
consensus_11638#4 TGTGCCTTGGAGTGTTGTGAGAAGGGATGTTGACCTGTTGGTGCTGTGGCTGAACTAGCA 214
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 AACATTTTACACTTTCCTTGAGTTTTAGAAGGATTTACCTTTGTGCTTGCTGAACTAGCA 2574
consensus_11638#2 TTTTTTTTCCGCTTCCCTCTCACTGGGNNTTGATTAAAGAGGTTGGTGATTTTTCTTTCC 259
consensus_11638#3 CGTCTAATTATAATTCCTAACTGGGACACATAACAGGGACTATTTCCTAATGAACCAGCG 245
consensus_11638#1 CTCGGATGCATCTTGGCTGAACTGTACACTGGTGAAGTGCTCTTTCCAAATGAATCAGTA 1532
consensus_11638#4 TGCGGCACAATTTTCTTGTTTCAGTTTCTTCAGGGCAATTCTTGGAGTGGGAAGCC---C 271
consensus_11638#5 --------------------------------------TCCTTGGAGTGGAAGCCCTGAC 22
consensus_11638#0 TGCGGCACAATTTTCTTGTTTC-GTTTCTTCAGGGCAATTCTTGGAGTGGAAGCCC---- 2629
consensus_11638#2 CATTTGCCCAAATAAACCCCGGAA------GAGCACCACGCCCAAAGTTAAAGCCCTTCC 313
consensus_11638#3 CCCATAA-GGCTTGCTCAAATGATCGGTATAATTGGCCCAATTGACATGGAAATGCTTGC 304
consensus_11638#1 CAAATAA-TTCTTGCTCGGATGATAGGGACAATTGGTCCAATTGACATGGAAATGCTTGC 1591
* * *
consensus_11638#4 TACTCTCAGTG------TTAAGATTCGT----G-AGTGT--ATGT-------AAATATGA 311
consensus_11638#5 TGCTGCAAGTGG-----TTGAAGATTGCAGTGG-AGTGGTGATGT-------AAATATGA 69
consensus_11638#0 TGCTCTCAGTG------TTAAGATTCGT----G-AGTGT--ATGT-------AAATATGA 2669
consensus_11638#2 AACATCCAATGGG-CTTTTATTTGCCATACTAA-AGNCTAAATGA-------GNAACCAC 364
consensus_11638#3 CCTGGGAGAGGAGACGCACAAGTATTTCACTGATAATTACAACCTTTTCACCAAGAATGA 364
consensus_11638#1 ACTGGGACAAGATACCCAGAAGTACTTTACAGAAGACTACGACCTGTTCCACAAGAATGA 1651
* *
consensus_11638#4 GGAAATGTTTC-CTGTGTACATGTACACGTTGAAACA-GGCTCTTGTAAGCCATCTGATT 369
consensus_11638#5 GGAAAT-TTTC-CTGTGTACATGTACA-GTTGAAACA-GGCTCTTGTAAGCCATCTGATT 125
consensus_11638#0 GGAAAT-TTTC-CTGTGTACATGTACA-GTTGAAACACGGCTCTTGTAAGCCATCTGATT 2726
consensus_11638#2 CAGGTCATTTC-GTTTGTTTAAGTGCTTGTTCAACTG---CTCCTAAGCTGGATCCCTGC 420
consensus_11638#3 GGAAACAGATCACTTCGGGTATTTGATCCCAGAAAAG--TCTTCTCTGCAGCATCACTTA 422
consensus_11638#1 GGAGACGGATCAGTTGGAGTACTTGATCCCAGAGAAG--ATTTCCTTGCGGCGTCGCTTG 1709
** * * * * * * **
consensus_11638#4 CATCTTTCATAACATAGTGAAAATATGAAATAACTCATCCTGCAT-TTCTTCAAAAAAAA 428
consensus_11638#5 CATCTTTCATAACATAGTGAAAATATGAAATAA-TCATCCGGCGTGTTCTTCAAAAA--- 181
consensus_11638#0 CATCTTTCATAACATAGTGAAAATATGAAATAA-TCATCCTGC----------------- 2768
consensus_11638#2 AATCTTCTA-AAGATGGATTGATTTCTGGATGTTTTCCCCCATGAGGTCCCAGTGNACCA 479
consensus_11638#3 CAATGCCCT---GATTCAAAGTTTGTTGATTTT-CTATCCCATTTGCTGCAAATAAACCC 478
consensus_11638#1 CAGTGCCCC---GACACCAAATTTGTTAAATTT-CTTTCCTACCTGTTACAAATCAACCC 1765
* * * * **
consensus_11638#4 AA---------------------------------------------------------- 430
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ------------------------------------------------------------
consensus_11638#2 CTGNAAANCCATTTTACACTTTCCTTGAGTTTTAGAAGGATTTACCTT-TGTGCTTGCTG 538
consensus_11638#3 CAGGAGAAAACCAACGGCAAGTGAAGCGCTACAACATCAATGGCTTTCATTTGCATACTA 538
consensus_11638#1 CAGAAAGAGACCAACAGCCAGTGAAGCATTGCAGCATCCGTGGCTCTCATATGCCTATCA 1825
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ------------------------------------------------------------
consensus_11638#2 AACTAGCATGCGGCA--------CAATTTTCTTGTTTCGTTTCTTCAGGGCAATTCTTGG 590
consensus_11638#3 ATGACTAATGAGAAA--------CCAACAGGTCATTTCGTTTGTTTTAAGGGCTTTGTTC 590
consensus_11638#1 GTGAGATGTCAACCAAATGTGTTTATACGGGATGGATCGTTTTTCTGAAGTTCCATTTGC 1885
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ------------------------------------------------------------
consensus_11638#2 AGTGGAAGCCCTACTCTCAGTGTTAAGATTCGTGAGTGTATGTAAATATGAGGAAATTTT 650
consensus_11638#3 AACTGCTCCTAAGCTGGATCCCTGCAATCTTCTAAAGATGGATTGATTTTCTGATGTTTC 650
consensus_11638#1 ACCAGGATTTGGCTTTTCCGTTTTTTTCAGGGCAGTCCTTGGTTAGCATCGAAACCCTGT 1945
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ------------------------------------------------------------
consensus_11638#2 CCTGTGTAAAAAAAAA-------------------------------------------- 666
consensus_11638#3 CCCTTGTCTCGTCCT--------------------------------------------- 665
consensus_11638#1 TTTCCGAGATGAATGCAAACTTGCTCGTGCATGTAAATATGAGAAGAAGAAAAGGTTCCT 2005
consensus_11638#4 ------------------------------------------------------------
consensus_11638#5 ------------------------------------------------------------
consensus_11638#0 ------------------------------------------------------------
consensus_11638#2 ------------------------------------------------------------
consensus_11638#3 ------------------------------------------------------------
consensus_11638#1 TGTTGCATATATGTATAGCTGTCACTTTGATGTACTTCACCCAACTCATCAATAGAAATG 2065
consensus_11638#4 ------
consensus_11638#5 ------
consensus_11638#0 ------
consensus_11638#2 ------
consensus_11638#3 ------
consensus_11638#1 TGTTTC 2071
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||