cluster # 11644

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Oryza sativa
cluster # 11644 cluster # 11644 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11644#0 length = 1903 sequences # 9
consensusID : consensus_11644#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1903
fasta sequence
                              [AAAAGGACAGGAGGTCTCGTCACGAGCGCGAGGAGGAGGAGGAGGAGGACGACGATGGCGATGGCGGCGGCGAAGGGCAGGGTCCTGCCGCTGCTGGCGGTGGCGGCGGCGCTCGCGGCGGCGCTCCTCTACCGCGCGCCCTTTTCCAAGAGCCTGGGCGGTGAGGGGTGCAGCCTTCTCCCCCACGACCACTTCTGGATCGCCAGCGAGCGCGTCGTCACGCTCGGACGGGTCGGCCCCGCCGCAGTGGAGGTGAAGGGAGGGCTGATCAACGCGATCGCCGTCGGGGATTACCGGAGCTTCCTGCTCCGGCGACCGGTGGTGGACTACGGTGACGCGGTTATCATGCCCGGACTGATCGATGTGCACGCGCATCTTGATGAGCCAGGACGTGCTGAGTGGGAGGGGTTCTCCACTGGTACAAGAGCAGCAGCTGCAGGTGGCATTACAACATTAGTGGACATGCCTCTTAATAGCTACCTGTCAACTGTTTCTGAAGAAACTCTCAAGCTGAAGTTGGATGCAGCTAAGGATAAACTACATGTTGATGTAGGGTTCTGGGGAGGCCTCGTTCCAGAGAATGCCCTCAATCCAAGTGCACTAGAGAGCCTATTAAATGCAGGCGTCTTAGGGCTCAAGTCATTTATGTGCCCCTCAGGTATAAATGACTTCCCCATGACAAATTCAACTCATATTGAGGAGGGCCTGGTTACATTGGCAAAGTACAAAAGGCCGTTACTTATCCATGCAGAACGCATACCCGATGTTCAGAATGAAGATGGGATCGATGGTGAACTAGATCCTAAAGCCTATACGACATATCTTAAATCTAGACCACCAGCATGGGAGGAAGCAGCGATCAAAGATCTGCAACGTGAGATGAAAGACACGGAGATAGGGGGTCGGTCAGAAGGAGCTCATAGTCACATAGTTCATCTCTCAGATGCAAAAACTTCTCTTGGGCTTCTTAAGGATGCAAAACAAAATGGTGCAAGGGTTAGTGTAGAAACCTGTCCTCATTACCTGGCGTTTTCAGCTGAAGAAGTTCCTGATGGAGATACTCGCTTTAAATGTGCTCCTCCTATACGCGATTCAACCAACAGAGATAATCTCTGGGAAGCTCTGCTTGATGGACACATAGACATGTTGAGCTCAGACCATTCACCATCAGCTCCTGATCTCAAACTCATGGAGGAAGGTAACTTCTTAAGGGCATGGGGAGGCATATCATCTTTGCAG-TTTGTTCTCCCTGTAACATGGTCGCATGGGAAAAAATACGGTATCAGTTTGAATCA-ACTGGCATCATGGTGGAGCGAAAGGCCT-GCTATGCTTGCAGGGTTAAAGAAAAAGGGTGCTGTTCTGCCGGGATACCGTGCTGATATTGTGGTATGGAAACCTGAGGCTCAATTCCATCTTGATGACAGCCATCCTGTCTACCATAAGCATCGGAATATTTCGGCATATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCACCTTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACAAACATGCAAAGGCTGCATGTGGTGCTCCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTGTATATGATCGTATGCGCTACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCCTGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCA-TTCGATTGTGCTACATTGTACTTCATGTGGACAGCGTATAGTGATTGTA-TTTTTTATATTATTCAGATACTCCTGTAATCTAGTTTACGTGGAAGTGT-AATTCAGTTACTTTATCAGCTGTTTATGTAGATGAACTGGAATAATAAA-CGCGTGATGTTAAGAATGCTTTAAAAA]

[+] EMBL AK067234             [AAAAGGACAGGAGGTCTCGTCACGAGCGCGAGGAGGAGGAGGAGGAGGACGACGATGGCGATGGCGGCGGCGAAGGGCAGGGTCCTGCCGCTGCTGGCGGTGGCGGCGGCGCTCGCGGCGGCGCTCCTCTACCGCGCGCCCTTTTCCAAGAGCCTGGGCGGTGAGGGGTGCAGCCTTCTCCCCCACGACCACTTCTGGATCGCCAGCGAGCGCGTCGTCACGCTCGGACGGGTCGGCCCCGCCGCAGTGGAGGTGAAGGGAGGGCTGATCAACGCGATCGCCGTCGGGGATTACCGGAGCTTCCTGCTCCGGCGACCGGTGGTGGACTACGGTGACGCGGTTATCATGCCCGGACTGATCGATGTGCACGCGCATCTTGATGAGCCAGGACGTGCTGAGTGGGAGGGGTTCTCCACTGGTACAAGAGCAGCAGCTGCAGGTGGCATTACAACATTAGTGGACATGCCTCTTAATAGCTACCTGTCAACTGTTTCTGAAGAAACTCTCAAGCTGAAGTTGGATGCAGCTAAGGATAAACTACATGTTGATGTAGGGTTCTGGGGAGGCCTCGTTCCAGAGAATGCCCTCAATCCAAGTGCACTAGAGAGCCTATTAAATGCAGGCGTCTTAGGGCTCAAGTCATTTATGTGCCCCTCAGGTATAAATGACTTCCCCATGACAAATTCAACTCATATTGAGGAGGGCCTGGTTACATTGGCAAAGTACAAAAGGCCGTTACTTATCCATGCAGAACGCATACCCGATGTTCAGAATGAAGATGGGATCGATGGTGAACTAGATCCTAAAGCCTATACGACATATCTTAAATCTAGACCACCAGCATGGGAGGAAGCAGCGATCAAAGATCTGCAACGTGAGATGAAAGACACGGAGATAGGGGGTCGGTCAGAAGGAGCTCATAGTCACATAGTTCATCTCTCAGATGCAAAAACTTCTCTTGGGCTTCTTAAGGATGCAAAACAAAATGGTGCAAGGGTTAGTGTAGAAACCTGTCCTCATTACCTGGCGTTTTCAGCTGAAGAAGTTCCTGATGGAGATACTCGCTTTAAATGTGCTCCTCCTATACGCGATTCAACCAACAGAGATAATCTCTGGGAAGCTCTGCTTGATGGACACATAGACATGTTGAGCTCAGACCATTCACCATCAGCTCCTGATCTCAAACTCATGGAGGAAGGTAACTTCTTAAGGGCATGGGGAGGCATATCATCTTTGCAG TTTGTTCTCCCTGTAACATGGTCGCATGGGAAAAAATACGGTATCAGTTTGAATCA ACTGGCATCATGGTGGAGCGAAAGGCCT GCTATGCTTGCAGGGTTAAAGAAAAAGGGTGCTGTTCTGCCGGGATACCGTGCTGATATTGTGGTATGGAAACCTGAGGCTCAATTCCATCTTGATGACAGCCATCCTGTCTACCATAAGCATCGGAATATTTCGGCATATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCACCTTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACAAACATGCAAAGGCTGCATGTGGTGCTCCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTGTATATGATCGTATGCGCTACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCCTGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCA TTCGATTGTGCTACATTGTACTTCATGTGGACAGCGTATAGTGATTGTA TTTTTTATATTATTCAGATACTCCTGTAATCTAGTTTACGTGGAAGTGT AATTCAGTTACTTTATCAGCTGTTTATGTAGATGAACTGGAATAATAAA CGCGTGATG                  ]
[+] EMBL CB636503             [          GAGGTCTCGTCACGAGCGCGAGGAGGAGGAGGAGGAGGACGACGATGGCGATGGCGGCGGCGAAGGGCAGGGTCCTGCCGCTGCTGGCGGTGGCGGCGGCGCTCGCGGCGGCGCTCCTCTACCGCGCGCCCTTTTCCAAGAGCCTGGGCGGTGAGGGGTGCAGCCTTCTCCCCCACGACCACTTCTGGATCGCCAGCGAGCGCGTCGTCACGCTCGGACGGGTCGGCCCCGCCGCAGTGGAGGTGAAGGGAGGGCTGATCAACGCGATCGCCGTCGGGGATTACCGGAGCTTCCTGCTCCGGCGACCGGTGGTGGACTACGGTGACGCGGTTATCATGCCCGGACTGATCGATGTGCACGCGCATCTTGATGAGCCANGACGTGCTGAGTGGGAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB640736             [                                                             TGGCGGCGGCGAAGGGCAGGGTCCTGCCGCTGCTGGCGGTGGCGGCGGCGCTCGCGGCGGCGCTCCTCTACCGCGCGCCCTTTTCCAAGAGCCTGGGCGGTGAGGGGTGCAGCCTTCTCCCCCACGACCACTTCTGGATCGCCAGCGAGCGCGTCGTCACGCTCGGACGGGTCGGTTTTTTCGCAGTGGAGGTGAAGGGAGGGCTGATCAACGCGATCGCCGTCGGGGATTACCGGACCTTCCTGCTCCGGCGACCGGTGGTGGACTACGGTGACGCGGTTATCATGCCCGGACTGATCGATGTGCACGCGCATCTTGATGAGCCAGGACGTGCTGAGTGGGAGGGGTTCTCCACTGGTACAAGAGCAGCANCTGCAGGTGGCATTACAACATTAGTGGACATGCCTCTTAATAGCTACCCGTCAACTGTTTCTGAAGAAACTCTCAAGCTGAAGTTGGATGCAGCTAAGGATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C97503               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATCCTAAAGCCTATACGACATATCTTAAATCTAGACCACCAGCATGGGAGGAAGCAGCGATCAAAGATCTGCAACGTGCGATGAAAGACACGGAGATAGGGGGTCGGTCAGAAGGAGCTCATATTCACATAGTTCATCTCTCAGATGCAAAAACTTCTCTTGGGCTTCTTAAGGATGCAAAACAAAATGGTGCAAGGGTTAGTGTAGAAACCTGTCCTCATTACCTGGCGTTTTCAGCTGAAGAAGTTCCTGATGGAGATACTCGCTTTAAATGTGCTCCTCCTATACGCGATTCAACCAACAGAGATAATCTCTGGGGAGCTCTGCTTGATGGNCACATAGACATGTTGAGCTCAGACCATTCACCATCAGCTCCTGATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB663450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACATAGACATGTTGAGCTCAGACCATTCACCATCAGCTCCTGATCTCAAACTCATGGAGGAAGGTAACTTCTTAAGGGCATGGGGAGGCATATCATCTTTGCAG TTTGTTCTCCCTGTAACATGGTCGCATGGGAAAAAATACGGTATCAGTTTGAATCA ACTGGCATCATGGTGGAGCGAAAGGCCT GCTATGCTTGCAGGGTTAAAGAAAAAGGGTGCTGTTCTGCCGGGATACCGTGCTGATATTGTGGTATGGAAACCTGAGGCTCAATTCCATCTTGATGACAGCCATCCTGTCTACCATAAGCATCGGAATATTTCGGCATATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCCCCTTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACAAACATGCAAAGGCTGCATGTGGTGCTCCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTGTATATGATCGTATGCGCTACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCCTGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCA TTCGATTGTGCTACATTGTACTTCATGTGGACAGCGTATAGTGATTGTA TTTTTTATATTATTCAGATACTCCTGTAATCTAGTTTACGTGGAAGTGT AATTCAGTTACTTTATCAGCTGTTTATGTAGATGAACTGGAATAATAAACCGCG                       ]
[+] EMBL C97502               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTTTNCAGCTTTGTTCTCCCTGTAACATGGTCNCATGGGAAAAAATNCGGTATCAGTTTGAATCACCCTGGCATCATGGTGGAGCGAAAGGCCTGGCTATGCTTCCAGGTTTAAAGAAAAAGGGTGCTGTTCTNCCGGGATACCGTGCTGATATTGTGGTCTGGAAACCTGAGGCTCAATTCCATCTTGATGACAGCCATCCTGTCTACCATAAGCNTCGGAATATTTCGGCATATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCNCCTTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACANACATGCAAAGGCTGCATGTGGTGCTCCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTGTATATGATCGTATGCGCTACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCCTGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCA TTCGATTGTGCTACATTGTACTTCATGTGGACAGCGTATAGTGATTGTA TTTTCTCTATTATTCAGATACTCCTGTAATCTAGTTTACGTGGAAGTGT AATTCAGTTACTTTANCAGCTGTTTATGTAGATGAACTGGAATAATAAAaaaaaaaaa                   ]
[-] EMBL CB636504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATCA ACTGGCATCATGGTGGAGCGAAAGGCCT GCTATGCTTGCAGGGTTAAAGAAAAAGGGTGCTGTTCTGCCGGGATACCGTGCTGATATTGTGGTATGGAAACCTGAGGCTCAATTCCATCTTGATGACAGCCATCCTGTCTACCATAAGCATCGGAATATTTCGGCATATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCACCTTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACAAACATGCAAAGGCTGCATGTGGTGCTCCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTGTATATGATCGTATGCGCTACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCCTGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCA TTCGATTGTGCTACATTGTACTTCATGTGGACAGCGTATAGTGATTGTA TTTTTTATATTATTCAGATACTCCTGTAATCTAGTTTACGTGGAAGTGT AATTCAGTTACTTTATCAGCTGTTTATGTAGATGAAGTGGAATAATAAA CGCGTGATGTTAA              ]
[-] EMBL CF311002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGAAACATGAGGCTCAATTCCATCTTGATGACAGCCATCCTGTCTACCATAAGCATCGGAATATTTCGGCATATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCACCTTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACAAACATGCAAAGGCTGCATGTGGTGCTCCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTGTATATGATCGTATGCGCCACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCCTGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCA TTCGATTGTGCTACATTGTACTTCATGTGGACAGCGTATAGTGATTGTA TTTTTTATATTATTCAGATACTCCTGTAATTTAGTTCACGTGTAAGTGT AATTCAGTTACTTTATCACCTGTTTACGTTGATGAACTGATATAATAAA CGCGTAATGTTAGGAATGCTTTAAAAA]
[+] EMBL D42850               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCACCTTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACAAACATGCAAAGGCTGCATGTGGTGCTCCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTGTATATGATCGTATGCGCTACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCCTGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCATTTCGATTGTGCTACATTGTACTTCATGTGGACAGCGTATAGTGATTGTATTTTTTTATATTATTCAGATACTCCTGTAATCTAGTTTACGTGGAAGTGTAAATTCAG                                                                      ]




>consensus_11644#0
AAAAGGACAGGAGGTCTCGTCACGAGCGCGAGGAGGAGGAGGAGGAGGACGACGATGGCG
ATGGCGGCGGCGAAGGGCAGGGTCCTGCCGCTGCTGGCGGTGGCGGCGGCGCTCGCGGCG
GCGCTCCTCTACCGCGCGCCCTTTTCCAAGAGCCTGGGCGGTGAGGGGTGCAGCCTTCTC
CCCCACGACCACTTCTGGATCGCCAGCGAGCGCGTCGTCACGCTCGGACGGGTCGGCCCC
GCCGCAGTGGAGGTGAAGGGAGGGCTGATCAACGCGATCGCCGTCGGGGATTACCGGAGC
TTCCTGCTCCGGCGACCGGTGGTGGACTACGGTGACGCGGTTATCATGCCCGGACTGATC
GATGTGCACGCGCATCTTGATGAGCCAGGACGTGCTGAGTGGGAGGGGTTCTCCACTGGT
ACAAGAGCAGCAGCTGCAGGTGGCATTACAACATTAGTGGACATGCCTCTTAATAGCTAC
CTGTCAACTGTTTCTGAAGAAACTCTCAAGCTGAAGTTGGATGCAGCTAAGGATAAACTA
CATGTTGATGTAGGGTTCTGGGGAGGCCTCGTTCCAGAGAATGCCCTCAATCCAAGTGCA
CTAGAGAGCCTATTAAATGCAGGCGTCTTAGGGCTCAAGTCATTTATGTGCCCCTCAGGT
ATAAATGACTTCCCCATGACAAATTCAACTCATATTGAGGAGGGCCTGGTTACATTGGCA
AAGTACAAAAGGCCGTTACTTATCCATGCAGAACGCATACCCGATGTTCAGAATGAAGAT
GGGATCGATGGTGAACTAGATCCTAAAGCCTATACGACATATCTTAAATCTAGACCACCA
GCATGGGAGGAAGCAGCGATCAAAGATCTGCAACGTGAGATGAAAGACACGGAGATAGGG
GGTCGGTCAGAAGGAGCTCATAGTCACATAGTTCATCTCTCAGATGCAAAAACTTCTCTT
GGGCTTCTTAAGGATGCAAAACAAAATGGTGCAAGGGTTAGTGTAGAAACCTGTCCTCAT
TACCTGGCGTTTTCAGCTGAAGAAGTTCCTGATGGAGATACTCGCTTTAAATGTGCTCCT
CCTATACGCGATTCAACCAACAGAGATAATCTCTGGGAAGCTCTGCTTGATGGACACATA
GACATGTTGAGCTCAGACCATTCACCATCAGCTCCTGATCTCAAACTCATGGAGGAAGGT
AACTTCTTAAGGGCATGGGGAGGCATATCATCTTTGCAGTTTGTTCTCCCTGTAACATGG
TCGCATGGGAAAAAATACGGTATCAGTTTGAATCAACTGGCATCATGGTGGAGCGAAAGG
CCTGCTATGCTTGCAGGGTTAAAGAAAAAGGGTGCTGTTCTGCCGGGATACCGTGCTGAT
ATTGTGGTATGGAAACCTGAGGCTCAATTCCATCTTGATGACAGCCATCCTGTCTACCAT
AAGCATCGGAATATTTCGGCATATTTGGGAAAGCAGCTTTCAGGGAAGATACTGTCCACC
TTTGTGGGTGGGAATCTTGTGTTCGCTGAAGACAAACATGCAAAGGCTGCATGTGGTGCT
CCAATCCTCGCCAAATAAAATTCAGGTGGATCCAGTGCTTACAGTTGTTGATTTGTAGTG
TATATGATCGTATGCGCTACACATTTTGATTTGCGGCAAAACTGCAAATGGCAATGTCCC
TGTGTGTATAATTTAGCCCGGCTCTTCCATTGTTATATACCACTCTCCATTCGATTGTGC
TACATTGTACTTCATGTGGACAGCGTATAGTGATTGTATTTTTTATATTATTCAGATACT
CCTGTAATCTAGTTTACGTGGAAGTGTAATTCAGTTACTTTATCAGCTGTTTATGTAGAT
GAACTGGAATAATAAACGCGTGATGTTAAGAATGCTTTAAAAA
clustalw multiple alignements is not computed in this case