These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11645#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1159 fasta sequence [AATCGCAGTCGTGCTCGTCTCATCCCGCTGTATATAAGCAGGCGACTCCTGTGTACCCGCGCACACGCAAACCATTTGCATTTGAGCCTTTTGCTTGCCTTCTCTCCTGTCCTGACTGCAGCGAGAGATCAGTAGGGAGAGGGCAATGGCATTGACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATGTCGCCGGCGGGGGCGCCGGCG-CCGGCGGGCGGGATCAGCCCGGCGTGCATGGACGCGGTGCTCAACATGTCGGACTGCC-TGACGTACGTGA-TGAACGGGAGCACGGCGCGGAAGCCCGACGAGCCGTGCTGCCCGGAGCTGGCGGGGCTGCTCGAGTCCAAGCCCGTCTGCCTCTGCCAGCTGCTCGCCGGCGGCGCCAGCTCGTACGACATCAGCGTCGACTACAAGCGCGCCATGGCGCTCCCGGGCATCTGCGGCCTCGCCGCGCCGCCCGTCACCGCATGCGCGCTTCTTGGAGTACCTGTGCCTATGGCGCCTTCTGCATCGCCGATGGCAGGCCTCGGGCCATCTACTGAACCACAAATGCCTGAGAAATCGCCGTCGGCCTCGCCGTCCGAGTCGAGTAACCATGCTCCCGGCCGCTTCACCGCCCTCGCCGCGGTGGTCCTCGCCGTTGCAGCCGCCGGGATGGTTTAGAAAATGCCTGGATTTTCGGCCGATCGATCTCAAGATTTAGCCCGACGATTCTTGTTTATTCTTGCCACACATTTGGCTGTGTATTAATTTACAACACGTTACAGTACGTATGCGCAATGAACGATATTTTTCTGCTTTGCTTTAAATTCTTATAATTAACTAGTAACTCTTCCTTGTCGTAAGTTGCTAGAGCATATGGTGAGACTATATGTACACACGTAGTGATATCTGGCCATCCGCAGTAGCTACTTGGGGCCTTCTGTTAATTATTTTCAGTGTTTAAATGCTTGGTTTTTGGAGGCGAGGTGGAGAGGATTTTTGGAAAGATGTGAGCTGGAGATGATCAAAGTGTGGGGAAAAAAAGCATTGGATTCGCCGGTCGGCAATACACGGCGGCCGGCCCCGATCGGCCGTAAGGCGCTGTAGGTTCATGAATGCTAAGATTCCGAT] [+] EMBL C28091 [AATCGCAGTCGTGCTCGTCTCATCCCGCTGTATATAAGCAGGCGACTCCTGTGTACCCGCGCACACGCAAACCATTTGCATTTGAGCCTTTTGCTTGCCTTCTCTCCTGTCCTGACTGCAGCGAGAGATCAGTAGGGAGAGGGCAATGGCATTGACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATGTCGCCGGCGGGGGCGCCGGCGCCCGGCGGGCGGGATCAGCCCGGCGTGCATGGACGCGGTGCTCAACATGTCGGACTGCC TGACGTACGTGA TGAACGGGAGCACGGCGCGGAANCCCGACGAGCCGTGCTGCCCGGANCTGGCGGGGCTGCTCGAGTC ] [+] EMBL AK061173 [ CCATTTGCATTTGAGCCTTTTGCTTGCCTTCTCTCCTGTCCTGACTGCAGCGAGAGATCAGTAGGGAGAGGGCAATGGCATTGACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATGTCGCCGGCGGGGGCGCCGGCG CCGGCGGGCGGGATCAGCCCGGCGTGCATGGACGCGGTGCTCAACATGTCGGACTGCC TGACGTACGTGA TGAACGGGAGCACGGCGCGGAAGCCCGACGAGCCGTGCTGCCCGGAGCTGGCGGGGCTGCTCGAGTCCAAGCCCGTCTGCCTCTGCCAGCTGCTCGCCGGCGGCGCCAGCTCGTACGACATCAGCGTCGACTACAAGCGCGCCATGGCGCTCCCGGGCATCTGCGGCCTCGCCGCGCCGCCCGTCACCGCATGCGCGCTTCTTGGAGTACCTGTGCCTATGGCGCCTTCTGCATCGCCGATGGCAGGCCTCGGGCCATCTACTGAACCACAAATGCCTGAGAAATCGCCGTCGGCCTCGCCGTCCGAGTCGAGTAACCATGCTCCCGGCCGCTTCACCGCCCTCGCCGCGGTGGTCCTCGCCGTTGCAGCCGCCGGGATGGTTTAGAAAATGCCTGGATTTTCGGCCGATCGATCTCAAGATTTAGCCCGACGATTCTTGTTTATTCTTGCCACACATTTGGCTGTGTATTAATTTACAACACGTTACAGTACGTATGCGCAATGAACGATATTTTTCTGCTTTGCTTTAAATTCTTATAATTAACTAGTAACTCTTCCTTGTCGTAAGTTGCTAGAGCATATGGTGAGACTATATGTACACACGTAGTGATATCTGGCCATCCGCAGTAGCTACTTGGGGCCTTCTGTTAATTATTTTCAGTGTTTAAATGCTTGGTTTTTGGAGGCGAGGTGGAGAGGATTTTTGGAAAGATGTGAGCTGGAGATGATCAAAGTGTGGGGAAAAAAAGCATTGGATTCGCCGGTCGGCAATACACGGCGGCCGGCCCCGATCGGCCGTAAGGCGCTGTAGGTTCATGAATGCTAAGATTCCGAT] [+] EMBL AK059376 [ ATTTGCATTTGAGCCTTTTGCTTGCCTTCTCTCCTGTCCTGACTGCAGCGAGAGATCAGTAGGGAGAGGGCAATGGCATTGACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATGTCGCCGGCGGGGGCGCCGGCG CCGGCGGGCGGGATCAGCCCGGCGTTCATGGACGCGGTGCTCAACATGTCGGACTGCC TGACGTACGTGA TGAACGGGAGCACGGCGCGGAAGCCCGACGAGCCGTGCTGCCCGGAGCTGGCGGGGCTGCTCGAGTCCAAGCCCGTCTGCCTCTGCCAGCTGCTCGCCGGCGGCGCCAGCTCGTACGACATCAGCGTCGACTACAAGCGCGCCATGGCGCTCCCGGGCATCTGCGGCCTCGCCGCGCCGCCCGTCACCGCATGCGCGCTTCTTGGAGTACCTGTGCCTATGGCGCCTTCTGCATCGCCGATGGCAGGCCTCGGGCCATCTACTGAACCACAAATGCCTGAGAAATCGCCGTCGGCCTCGCCGTCCGAGTCGAGTAACCATGCTCCCGGCCGCTTCACCGCCCTCGCCGCGGTGGTCCTCGCCGTTGCAGCCGCCGGGATGGTTTAGAAAATGCCTGGATTTTCGGCCGATCGATCTCAAGATTTAGCCCGACGATTCTTGTTTATTCTTGCCACACATTTGGCTGTGTATTAATTTACAACACGTTACAGTACGTATGCGCAATGAACGATATT ] [+] EMBL C74247 [ TGAGCCTTTTGCTTGCCTTCTCTCCTGTCCTGACTGCAGCGAGAGATCAGTAGGGAGAGGGCAATGGCATTGACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATGTCGCCGGCGGGGGCGCCGGCG CCGGCGGGCGGGATCAGCCCGGCGTGCATGGACGCGGTGCTCAACATGTCGGACTGCC TGACGTACGTGA TGAACGGGAGCACGGCGCGGAAGCCCGACGAGCCGTGCTGCCCGGAGCTGGCGGGGCTGCTCGAGTCCAAGCCCGTCTGCCTCTG CAGCTGCTCGCCGGCGGCGCCAGCTCGTACGACATCAGCGTCGACTACAAGCGCGCCATGGCGCTCCCGGGCATCTGCGGCCTCGCCGCGCCGCCCGTCACCGCATG ] [+] EMBL CF325403 [ TTTTGCTTGCCTTCTCTCCTGTCCTGACTGCAGCGAGAGATCAGTAGGGAGAGGGCAATGGCATTGACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATGTCGCCGGCGGGGGCGCCGGCG CCGGCGGGCGGGATCAGCCCGGCGTGCATGGACGCGGTGCTCAACATGTCGGACTGCC TGACGTACGTGA TGAACGGGAGCACGGCGCGGAAGCCCGACGAGCCGTGCTGCCCGGAGCTGGCGGGGCTGCTCGAGTCCAAGCCCGTCTGCCTCTGCCAGCTGCTCGCCGGCGGCGCCAGCTCGTACGACATCAGCGTCGACTACAAGCGCGCCATGGCGCTCCCGGGCATCTGCGGCCTCGCCGCGCCGCCCGTCACCGCATGCGCGCTTCTTGGAGTACCTGTGCCTATGGCGCCTTCTGCATCGCCGATGGCAGGCCTCGGGCCATCTACTGAACCACAAATGCCTGAGAAATCGCCGTCGGCCTCGCCGTCCGAGTCG ] [+] EMBL CF325412 [ TTCTCTCCTGTCCTGACTGCAGCGAGAGATCAGTAGGGAGAGGGCAATGGCATTGACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATGTCGCCGGCGGGGGCGCCGGCG CCGGCGGGCGGGATCAGCCCGGCGTGCATGGACGCGGTGCTCAACATGTCGGACTGCC TGACGTACGTGA TGAACGGGAGCACGGCGCGGAAGCCCGACGAGCCGTGCTGCCCGGAGCTGGCGGGGCTGCTCGAGTCCAAGCCCGTCTGCCTCTGCCAGCTGCTCGCCGGCGGCGCCAGCTCGTACGACATCAGCGTCGACTACAAGCGCGCCATGGCGCTCCCGGGCATCTGCGGCCTCGCCGCGCCGCCCGTCACCGCATGCGCGCTTCTTGGAGTACCTGTGCCTATGGCGCCTTCTGCATCGCCGATGGCAGGCCTCGGGCCATCT ] [+] EMBL C74501 [ TCTCTCCTGTCCTGACTGCAGCNAGAGATCAGTAGGGAGAGGGCAATGGCATTNACGGTGCGGCTGCACACGGCGGTGGCGGCGGTGGCCGTGGCCGTGGTGGTGGCGATGGGGATGGCGGCGGCGCAGATNTCGCCGGCGGGGGCGCC GCG CCGGCGGGCGGGATCANCCCGGCGTGCATNGACGCGGTGCTCAANATGTCGGACTGCCTTAACGTACGTTATTAAAGGGGAGCCCGGCNCCGAAACCCcaaaa ] [+] EMBL AU094804 [ CCGGCCGTTTCACCGCCCTCGCCGCGGTGGTCCTCGCCGTTGCAGCCGCCGGGATGGTTTAGAAAATGCCTGGATTTTCGGCCGATCGATCCCAAGATTTAGCCCGACGATTCTTGTTTANTCTTGCCACACATTTGGCNGTGTATTAATTTACAACACGTTACAGTACGTATGCGCAATGANCGATATTTTTCTGCTTTGCTTTAAATTCTTATAATTAACTAGTAACTCTTCCTTGTCGTAAGTTGCTAGAGCATATGGTGAGACTATATGTACACACGTAGTGATATNTGGCCATCCGCAGTAGCTAaaaaaaaaa ] [+] EMBL AA751223 [ CCTCNNYGCGGTGGTCCTCGCCGTTGCAGCCGCCGGGATGGTTTAGAAAATGCCTGGATTTTTNNCCGATCGATCTCAAGATTTAGCCCGACGATTCTTGTTTATTCTTGCCACACATTTGGCTGTGTATTAATTTACAACACGTTACAGTACGTATGTGCAATGAACGATATTTTTCTGCTTTG TTTAAATTCTTATAAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||