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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11654#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2684 fasta sequence
[TTGGAAGTCAGGGAAATATATCAAATATGTCTTCCCAACAGAGCACAGATCTGTCTGCCCAACAAAATCTAGCACCTTCACCACTTCCACCTGCAGAAGCAGAACGAACAGGTTTGCTTACCACACAGCCAGCTCAGAATTTCCAACCTGAATTGCAACCATCAACCTCATTGTTTGATGCTTCACTTGAAAGTAACAACATAAGTCAAACAGATTGTCAATCAGATCGAGCAGTTGTTTTCTTGCAGGAAGGTGCAACAACTCAACAACATTTACTTGATACCGGAGTTGTAGTTGATGACATTGTTGCCGAAGAGCCTTCACACTCAGAATCTCCAACTTACATCATTCACGAAACAGCTGCCTTGGTAGTTTCGACAGAAGTTGAAACTCAGACTTGTCAATCAAATATACCTATACAACAAAATACAAGCCACCCTGCCCAACAAAGTCCAGAAACTTCACGACATTCAATTGCAAGTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCAGGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTTGAGTGCTGCAGCAGCTCA-GAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCGATCTTGCACGACAGANACTTGTGATTTGCAGCCCCAACTGGATCTATCATCCACAATACAGACTGTCCAACTTGAAGGAATACGCTCTGAAGACATGAATCAGATAGGTGTTCAGTCCAACTCTGCACTAAGTTCTGAACAGCCCACCCAGCCTCTTCCAGTGGCACCATTAGTGTTTAATTATCAAAGATTTAGTGACGAACCTCTCAAAAATGAGCTGGAAAGATTAAAACATACCAGCAATGTTCTTAGTAAAGTTCATGAACAAAAGAGAAAACAACTCCTAGTGGAGTATAACCAAGAAATGGAGAAGCTAAAACAGAAATATGACTCATTACTTCAAAAGGAAGATTCTTTTTACGCTCAGAAGGAGGCAGAACTTGATACTATCTACAGGAAAGTCTTTATAAACCAATCACTGGCTGAGAATTTTCGAAGGAAATTCCTACCATTATCTGCAGCTCAAGGGGGATCCACGAGACCCACAATTGGGCAGCTGGTTCAGTCTTCTCAGGAACCATCTGCAAGGATTGTAGCAGAGCAAGTCACAGCATCACCAGTTACCTTGTCATCAGCAGTTCGACCACAGGTGCTTCATTCATCAGGACCATATGTGCAACCTTCACTGGTGGTTCAACCATCATCACAGGCTACCCAACC-GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCTTTTCCTGCTGAAGATAATATGATGGGCTGCTGATATTTTTTTTGTTCTGACATGTGGGTATTGTCTCTGCTATCTCATTGACAGTAAGGGGCTTTACTGTCAATGAGTTGACCTGTTGTAGCATTGGATCCAGTCTGTCAACCCTGTTGTTACAGAAATGTGAGTGTTTTTTTAGTTGGAAATGTGGGTGCATTTTGTATATTGCTTAATCTTAGTGGCACATGCTGGTGCATGTTACGACGTTTATTTTGATTTTTGAAGACTTGTGGATGT]
[+] EMBL CF306574 [TTGGAAGTCAGGGAAATATATCAAATATGTCTTCCCAACAGAGCACAGATCTGTCTGCCCAACAAAATCTAGCACCTTCACCACTTCCACCTGCAGAAGCAGAACGAACAGGTTTGCTTACCACACAGCCAGCTCAGAATTTCCAACCTGAATTGCAACCATCAACCTCATTGTTTGATGCTTCACTTGAAAGTAACAACATAAGTCAAACAGATTGTCAATCAGATCGAGCAGTTGTTTTCTTGCAGGAAGGTGCAACAACTCAACAACATTTACTTGATACCGGAGTTGTAGTTGATGACATTGTTGCCGAAGAGCCTTCACACTCAGAATCT ]
[+] EMBL CF306271 [TTGGAAGTCAGGGAAATATATCAAATATGTCTTCCCAACAGAGCACAGATCTGTCTGCCCAACAAAATCTAGCACCTTCACCACTTCCACCTGCAGAAGCAGAACGAACAGGTTTGCTTACCACACAGCCAGCTCAGAATTTCCAACCTGAATTGCAACCATCAACCTCATTGTTTGATGCTTCACTTGAAAGTAACAACATAAGTCAAACAGATTGTCAATCAGATCGAGCAGTTGTTTTCTTGCAGGAAGGTGCAACAACTCAACAACATTTACTTGATACCGGAGTTGTAGTTGATGACATTGTTGCCGAAGAGCCTTCACACTCAGAATCTCCAACTTACATCATTCACGAAACAGCTGCCTTGGTAGTTTCGACAGAAGTTGAAACTCAGACTTGTCAATCAAATATACCTATACAACAAAATACAAGCCACCCTGCCCAACAAAGTCCAGAAACTTCACGACATTCAATTGCAAGTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGC ]
[+] EMBL CB639935 [ GTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCAGGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTTGAGTGCTGCAGCAGCTCA GAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCG ]
[+] EMBL CB639936 [ GTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCATGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTCGAGTGCTGCACCAGCTCATCAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGACCTGCCTGGTAT ]
[+] EMBL CB639850 [ GTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCAGGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTTGAGTGCTGCAGCAGCTCA GAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCGATCTTGCACGACAGANACTTGTGATTTGCAGCCCCAACTGGATCTATCATCCACAATACAGACTGTCCAACTTGAAGGAATACGCTC ]
[+] EMBL AK058383 [ GCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCGATCTTGCACGACAGAAACTTGTGATTTGCAGCCCCAACTGGATCTATCATCCACAATACAGACTGTCCAACTTGAAGGAATACGCTCTGAAGACATGAATCAGATAGGTGTTCAGTCCAACTCTGCACTAAGTTCTGAACAGCCCACCCAGCCTCTTCCAGTGGCACCATTAGTGTTTAATTATCAAAGATTTAGTGACGAACCTCTCAAAAATGAGCTGGAAAGATTAAAACATACCAGCAATGTTCTTAGTAAAGTTCATGAACAAAAGAGAAAACAACTCCTAGTGGAGTATAACCAAGAAATGGAGAAGCTAAAACAGAAATATGACTCATTACTTCAAAAGGAAGATTCTTTTTACGCTCAGAAGGAGGCAGAACTTGATACTATCTACAGGAAAGTCTTTATAAACCAATCACTGGCTGAGAATTTTCGAAGGAAATTCCTACCATTATCTGCAGCTCAAGGGGGATCCACGAGACCCACAATTGGGCAGCTGGTTCAGTCTTCTCAGGAACCATCTGCAAGGATTGTAGCAGAGCAAGTCACAGCATCACCAGTTACCTTGTCATCAGCAGTTCGACCACAGGTGCTTCATTCATCAGGACCATATGTGCAACCTTCACTGGTGGTTCAACCATCATCACAGGCTACCCAACC GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCT ]
[+] EMBL AK061065 [ ATGTGCAACCTTCACTGGTGGTTCAACCATCATCACAGGCTACCCAACC GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCTTTTCCTGCTGAAGATAATATGATGGGCTGCTGATATTTTTTTTGTTCTGACATGTGGGTATTGTCTCTGCTATCTCATTGACAGTAAGGGGCTTTACTGTCAATGAGTTGACCTGTTGTAGCATTGGATCCAGTCTGTCAACCCTGTTGTTACAGAAATGTGAGTGTTTTTTTAGTTGGAAATGTGGGTGCATTTTGTATATTGCTTAATCTTAGTGGCACATGCTGGTGCATGTTACGACGTTTATTTTGATTTTTGAAGACTTGTGGATGT]
[-] EMBL CB650673 [ AGGCTACCCAACC GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCNTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCTTTTCCTGCTGAAGATAATATGATGGGCTGCTGATATTTTTTTTGTT ]
[-] EMBL CA760058 [ aCCAACCGGGAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTTTTGGGGCACAACGNCATGCTCCCTCTCCTCATCTCCAGCAACTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCCGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGATGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAATATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGAC GGTGCTAACATCAATTCGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAAaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||