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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11664#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1173 fasta sequence
[CATCACTGGCTCACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG-TA-CAT-CAGAGACAGGCT-CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA-CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAATTTAAAAAAAAAAAAAAA]
[+] EMBL AK106319 [CATCACTGGCTCACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCA ]
[+] EMBL AU068090 [ ACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGC ]
[+] EMBL D55710 [ AACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTGTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAG ]
[+] EMBL OSC101501 [ AACGCCATCTCGATNGAAAGCTAGACTAACCAAGTATATATACGATCGATGGNGTTCCGGAGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGANCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTNTTCGGCCACGGCCGCTAATCCCTCGACCTCTTCGGTCACGACCTNCGCCGCGTCGGCAAC ]
[+] EMBL D43137 [ TCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTAGGCCACGGCCGCTACTCCCTCGACCTCTCCG ]
[+] EMBL AU068091 [ CCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAA ]
[+] EMBL AU082589 [ tcATGTTACCATCCAGAGACAGGCTCCAACTACNGTGGCAAGATGATCTGGAACNGGTACTACGACAAGAAGACCGACTACTCCATTNGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGANCNTNNNNNNATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATNTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAATCTTTAAAAAAAAAAAAAAA]
[+] EMBL CF329505 [ CAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAG ATATATATATATATATATATATACCAAGTATTGAATAAGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAA ]
[-] EMBL CF329504 [ AAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAACCCTATATATATACTCCTTTTTCCATTGGGAGCATGGAG ATATATATATATATATATATATACCAAGTATTGAATAAGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAAa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||