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Oryza sativa
cluster # 11665 cluster # 11665       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11665#0 length = 1771 sequences # 3  
consensus_11665#1 length = 1156 sequences # 6  

consensusID : consensus_11665#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1771
fasta sequence
                              [CCGTCGCCCAGGCCGGCGGATGAGAGCCAGGTGAGTGGAGCTCCACGAACCCACCCCACCCTTCCCGCTGCGGGTTCCTGACCTGGCCTGTGTGCCTGTGCCGCGAGAGAGCGCGAGATGTGGATCGGCTAGTCTCTCCATGGTCTCGTGCTCCTCGTCCCATGGTGTTTTGCTTACTTGCCCGTGTGTGTGCTGATGCTGCTGAAATGCTCATCTGGAAATCGGAATGGTGCGAGTGGGAAATGTGGGAGGATGAGGAGGAAGGAGGGAAGTAGCGCGACTCATGCCCATCCTAGAATTGACCTTCAGGTAGAGATAGATAGGAATTGCGCACGACCCTATTACAGGATGAAAAATTCCAAATCCAGAGTTAATCACTTCAACTAACAAGAGTATTATGCAATGTTTTTTTCCTTTGTCGGCCGTTCACACTCATGATCTACCAACGATGGTTTAGATTCTAACCTTAGCAGCTGAAATCAACCGAGGAATAGGCTTATGCGCGCATCAATTGGCACCCCTATATATTTTTCTTTCATTCATGAACAAACGTCCAATGGTAGTATGATACATCGATGAACAACTGAACACATGCTACTAGTTATCTTTCTTGGCAACTGCAGACGTGCAAATGGCAAGTAGAGGACTGCTCTGCAAGCACATGTTATGATTTTCTACTCCTGTTTTCATTAGTCCTTCTTATAATACATTAGTGTAGCGGAGCGTATTATGCAGTTTTGCTGTTTCAGAATTATGGAACACCCTTTTGCCCATGGAAACAATGCGACACATGGTTTTATACTAATGTATATGTCTCTCTTTGTTACCTTTTAGCATGTTGGATCATGCTGATGCTAATCTCTGCTATTTGCAGTGAACCATGGGAGGATTTTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGCGGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAAT-CCAAGTA-CCAATATAACTGACAATTCATTATCCGAAACTTAT-CACCTTGTGTCCAGACCTCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGTGAAAAGTCTATAAATCTAACA-CAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAGCTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGAATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATAACAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAGAATACACTCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAGTTGTATCTACGAATGGATGGAAA-GAAGTGATACTTGTCCGAA-TTTGTGGGAAGGAAATGGAGTTTTGTGAAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATCTACAGTGTGATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTTTTGAGATCAAATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGAATTTGATATATGAATATATTTTTGAATGCAAAAAAAAAAA]

[+] EMBL AK066457             [CCGTCGCCCAGGCCGGCGGATGAGAGCCAGGTGAGTGGAGCTCCACGAACCCACCCCACCCTTCCCGCTGCGGGTTCCTGACCTGGCCTGTGTGCCTGTGCCGCGAGAGAGCGCGAGATGTGGATCGGCTAGTCTCTCCATGGTCTCGTGCTCCTCGTCCCATGGTGTTTTGCTTACTTGCCCGTGTGTGTGCTGATGCTGCTGAAATGCTCATCTGGAAATCGGAATGGTGCGAGTGGGAAATGTGGGAGGATGAGGAGGAAGGAGGGAAGTAGCGCGACTCATGCCCATCCTAGAATTGACCTTCAGGTAGAGATAGATAGGAATTGCGCACGACCCTATTACAGGATGAAAAATTCCAAATCCAGAGTTAATCACTTCAACTAACAAGAGTATTATGCAATGTTTTTTTCCTTTGTCGGCCGTTCACACTCATGATCTACCAACGATGGTTTAGATTCTAACCTTAGCAGCTGAAATCAACCGAGGAATAGGCTTATGCGCGCATCAATTGGCACCCCTATATATTTTTCTTTCATTCATGAACAAACGTCCAATGGTAGTATGATACATCGATGAACAACTGAACACATGCTACTAGTTATCTTTCTTGGCAACTGCAGACGTGCAAATGGCAAGTAGAGGACTGCTCTGCAAGCACATGTTATGATTTTCTACTCCTGTTTTCATTAGTCCTTCTTATAATACATTAGTGTAGCGGAGCGTATTATGCAGTTTTGCTGTTTCAGAATTATGGAACACCCTTTTGCCCATGGAAACAATGCGACACATGGTTTTATACTAATGTATATGTCTCTCTTTGTTACCTTTTAGCATGTTGGATCATGCTGATGCTAATCTCTGCTATTTGCAGTGAACCATGGGAGGATTTTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGCGGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAAT CCAAGTA CCAATATAACTGACAATTCATTATCCGAAACTTAT CACCTTGTGTCCAGACCTCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGTGAAAAGTCTATAAATCTAACA CAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAGCTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGAATATAAAGTCCATCACTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATAACAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAGAATACACTCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAGTTGTATCTACGAATGGATGGAAA GAAGTGATACTTGTCCG A TTTGTGGGAAGGAAATGGAGTTTTGTGAAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATCTACAGTGTGATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTTTTGAGATCAAATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCG                                             ]
[+] EMBL AU085719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AATCCCAAGTACCCAATATAACTGACAATTCATTATCCGAAACTTATCCACCTTGTGTCCAGACCTCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGTGAAAAGTCTATAAATCTAACACCAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAGCTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGAATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATANCAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAG ATACACTCCAGACAATCCGAAGATTATAGCT AATGCTCCCATCATTATCATCTTAGTTGTATCTACGAATGGATGGAAA GAAGTGATACTTGTCCGAATTTTGTGGGAAGGAAATGGAGTTTTGTGAAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATCTACAGTGTGATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTTTTGAGATCAAATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGAATTTGATATATGAATATATTTTTGAATGCAAAAAAAAAAA]
[+] EMBL AU032207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGTGAAAAGTCTATAAATCTAACA CAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAGCTCTGGCATTGAACATTTAGCNGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGAATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATAACAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAGAATACACTCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAGTTGTATCTACGNATGGATGGAAAGGAAGTGATACTTGTCCGAT TTTGTGGGAAGG AATGGAGTTTTGTG AACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGGTCTA                                                                                                                                                              ]


>consensus_11665#0 CCGTCGCCCAGGCCGGCGGATGAGAGCCAGGTGAGTGGAGCTCCACGAACCCACCCCACC CTTCCCGCTGCGGGTTCCTGACCTGGCCTGTGTGCCTGTGCCGCGAGAGAGCGCGAGATG TGGATCGGCTAGTCTCTCCATGGTCTCGTGCTCCTCGTCCCATGGTGTTTTGCTTACTTG CCCGTGTGTGTGCTGATGCTGCTGAAATGCTCATCTGGAAATCGGAATGGTGCGAGTGGG AAATGTGGGAGGATGAGGAGGAAGGAGGGAAGTAGCGCGACTCATGCCCATCCTAGAATT GACCTTCAGGTAGAGATAGATAGGAATTGCGCACGACCCTATTACAGGATGAAAAATTCC AAATCCAGAGTTAATCACTTCAACTAACAAGAGTATTATGCAATGTTTTTTTCCTTTGTC GGCCGTTCACACTCATGATCTACCAACGATGGTTTAGATTCTAACCTTAGCAGCTGAAAT CAACCGAGGAATAGGCTTATGCGCGCATCAATTGGCACCCCTATATATTTTTCTTTCATT CATGAACAAACGTCCAATGGTAGTATGATACATCGATGAACAACTGAACACATGCTACTA GTTATCTTTCTTGGCAACTGCAGACGTGCAAATGGCAAGTAGAGGACTGCTCTGCAAGCA CATGTTATGATTTTCTACTCCTGTTTTCATTAGTCCTTCTTATAATACATTAGTGTAGCG GAGCGTATTATGCAGTTTTGCTGTTTCAGAATTATGGAACACCCTTTTGCCCATGGAAAC AATGCGACACATGGTTTTATACTAATGTATATGTCTCTCTTTGTTACCTTTTAGCATGTT GGATCATGCTGATGCTAATCTCTGCTATTTGCAGTGAACCATGGGAGGATTTTGCTGTTG CCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGG TGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGCGGGTATACTGCCACATTCCAGAG GCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAATCC AAGTACCAATATAACTGACAATTCATTATCCGAAACTTATCACCTTGTGTCCAGACCTCC ACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCG TGAAAAGTCTATAAATCTAACACAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAG CTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGA ATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATAACAGCAG TTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAGAATACAC TCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAGTTGTATCTA CGAATGGATGGAAAGAAGTGATACTTGTCCGAATTTGTGGGAAGGAAATGGAGTTTTGTG AAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATCTACAGTGTG ATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTTTTGAGATCA AATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGAATTTGATAT ATGAATATATTTTTGAATGCAAAAAAAAAAA



consensusID : consensus_11665#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1156
fasta sequence
                              [ACACCCCACCCCACGACGCCACCGAGCCCGGGAGGGAGAGGCCGACGCGACGCGACAAGTCCACACCCACACACGCACCAGCACCAGCCCAACTCACTCCTCCTCCCCCAGATTCCGCCGCTCCCTCCCCCTCGCCGCGCGGCGCCGCCGCCGCCGCGGTGGCCACCAGCAACGTCGAGCTCGCCGTCGCCCAGGCCGGCGGATGAGAGCCAGTGAACCATGGGAGGATTTTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGC-GGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAATCCAAGTACCAATATAACT-GACAATTCATTATCCGAAACTTATCACCTTGTGTCCAGACC-TCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGTGAAAAGTCTATAAATCTAACACAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAGCTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGAATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATAACAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAGAATACACTCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAGTTGTATCTACGAATGGATGGAAAGAAGTGATACTTGTCCGATTTGTGGGAAGGAAATGGAGTTTTGTGAAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATCTACAGTGTGATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTTTTGAGATCAAATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGAATTTGATATATGAATATATTTTTGAATGCATTNNCCCCCCCCCCCCCCCNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA755370             [ACACCCCACCCCACGACGCCACCGAGCCCGGGAGGGAGAGGCCGACGCGACGCGACAAGTCCACACCCACACACGCACCAGCACCAGCCCAACTCACTCCTCCTCCCCCAGATTCCGCCGCTCCCTCCCCCTCGCCGCGCGGCGCCGCCGCCGCCGCGGTGGCCACCAGCAACGTCGAGCTCGCCGTCGCCCAGGCCGGCGGATGAGAGCCAGTGAACCATGGGAGGATTTTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGC GGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAATCCAAGTACCAATATAACT GACAATTCATTATCCGAAACTTATCACCTTGTGTCCAGACC TCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGTGAAAAGTCTATAAATCTAACACAAGAAGAGTCACTGGCTCTTAGGCGAAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK073650             [               ACGCCACCGAGCCCGGGAGGGAGAGGCCGACGCGACGCGACAAGTCCACACCCACACACGCACCAGCACCAGCCCAACTCACTCCTCCTCCTCCAGATTCCGCCGCTCCCTCCCCCTCGCCGCGCGGCGCCGCCGCCGCCGCGGTGGCCACCAGCAACGTCGAGCTCGCCGTCGCCCAGGCCGGCGGATGAGAGCCAGTGAACCATGGGAGGATTTTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGC GGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAATCCAAGTACCAATATAACT GACAATTCATTATCCGAAACTTATCACCTTGTGTCCAGACC TCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGTGAAAAGTCTATAAATCTAACACAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAGCTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGAATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATAACAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAGAATACACTCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAGTTGTATCTACGAATGGATGGAAAGAAGTGATACTTGTCCGATTTGTGGGAAGGAAATGGAGTTTTGTGAAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATCTACAGTGTGATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTTTTGAGATCAAATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGAATTTGATATATGAATATAT                                                                    ]
[+] EMBL AU173061             [                           CCGGGAGGGAGAGGCCGACGCGACGCGACAAGTCCACACCCACACACGCACCAGCACCAGCCCAACTCACTCCTCCTCCCCCAGATTCCGCCGCTCCCTCCCCCTCGCCGCGCGGCGCCGCCGCCGCCGCGGTGGCCACCAGCAACGTCGAGCTCGCCGTCGCCCAGGCCGGCGGATGAGAGCCAGTGAACCATGGGAGGATTTTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGC GGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAATCCAAGTACCAATATAACT GACAATTCATTATCCGAAACTTATCACCTTGTGTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C27504               [                                                    gagCAAGTCCACACCCACACACGCACCAGCACCAGCCCAACTCACTCCTCCTCCCCCAGATTCCGCCGCTCCCTCCCCCTCGCCGCGCGG GCCGCCG CGCCGGGNTGGCCACCAGCAACGTCGAGCTCGCCGTCGCCCAGGCCGGCGGATGANAGCCAGTNAACCATGGGAGGATTTTNCTGTTGCCTCTGCACTGACGATTTCNAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGCGGGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGNAA CCAGCTCAAGGGGCTGCTCCATTGGAAT CACTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C27491               [                                                                                                                    GCCGCTCCCTCCCCCTCGCCGCG GG GCCGCCG CGNCGGGNTGGCCACCAGCAACGTCGAGCTCGCNGTCGCCCAGGCCGGCGGATGANAGCCAGTNAACCATGGGAGGATTTTNCTGTTGCCTCTGCACTGACGATTTCNAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGC GGGTATACTGCCACATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAATCCAAGTANCAATATAACTGGNCAATTCATTATCCGAAACTTATCACCTTGTGTCCAGACCTTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU095544             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTATAAGTGGAAGGNAAAAGATNTACAGTGTGATATGCTGGAGAGTNTGTAAATAATACTAGTTGTCCAGATAGATCTNTTTTTTGNGATCAAANTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGNGNTAGAATCNGATATATGAATATATTTTTGAATGCATTNNCCCCCCCCCCCCCCCNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11665#1 ACACCCCACCCCACGACGCCACCGAGCCCGGGAGGGAGAGGCCGACGCGACGCGACAAGT CCACACCCACACACGCACCAGCACCAGCCCAACTCACTCCTCCTCCCCCAGATTCCGCCG CTCCCTCCCCCTCGCCGCGCGGCGCCGCCGCCGCCGCGGTGGCCACCAGCAACGTCGAGC TCGCCGTCGCCCAGGCCGGCGGATGAGAGCCAGTGAACCATGGGAGGATTTTGCTGTTGC CTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTATAGGCAAGGT GTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGCGGGTATACTGCCACATTCCAGAGG CTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATCCACTAATCCA AGTACCAATATAACTGACAATTCATTATCCGAAACTTATCACCTTGTGTCCAGACCTCCA CCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGTATCTAGGCGT GAAAAGTCTATAAATCTAACACAAGAAGAGTCACTGGCTCTTAGGCGAAATGGCAGCAGC TCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACCTGAGGGTGAA TATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTATAACAGCAGT TTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGAAGAATACACT CCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAGTTGTATCTAC GAATGGATGGAAAGAAGTGATACTTGTCCGATTTGTGGGAAGGAAATGGAGTTTTGTGAA ACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATCTACAGTGTGAT ATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTTTTGAGATCAAA TTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGAATTTGATATAT GAATATATTTTTGAATGCATTNNCCCCCCCCCCCCCCCNNNNNAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11665#0      CCGTCGCCCAGGCCGGCGGATGAGAGCCAGGTGAGTGGAGCTCCACGAACCCACCCCACC 60
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      CTTCCCGCTGCGGGTTCCTGACCTGGCCTGTGTGCCTGTGCCGCGAGAGAGCGCGAGATG 120
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      TGGATCGGCTAGTCTCTCCATGGTCTCGTGCTCCTCGTCCCATGGTGTTTTGCTTACTTG 180
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      CCCGTGTGTGTGCTGATGCTGCTGAAATGCTCATCTGGAAATCGGAATGGTGCGAGTGGG 240
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      AAATGTGGGAGGATGAGGAGGAAGGAGGGAAGTAGCGCGACTCATGCCCATCCTAGAATT 300
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      GACCTTCAGGTAGAGATAGATAGGAATTGCGCACGACCCTATTACAGGATGAAAAATTCC 360
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      AAATCCAGAGTTAATCACTTCAACTAACAAGAGTATTATGCAATGTTTTTTTCCTTTGTC 420
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      GGCCGTTCACACTCATGATCTACCAACGATGGTTTAGATTCTAACCTTAGCAGCTGAAAT 480
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      CAACCGAGGAATAGGCTTATGCGCGCATCAATTGGCACCCCTATATATTTTTCTTTCATT 540
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      CATGAACAAACGTCCAATGGTAGTATGATACATCGATGAACAACTGAACACATGCTACTA 600
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      GTTATCTTTCTTGGCAACTGCAGACGTGCAAATGGCAAGTAGAGGACTGCTCTGCAAGCA 660
consensus_11665#1      ------------------------------------------------------------
                                                                                   

consensus_11665#0      CATGTTATGATTTTCTACTCC-TGTTTTCATTAGTCCTTCTTATAATACATTAGTGTAGC 719
consensus_11665#1      ---------ACACCCCACCCCACGACGCCACCGAGCCCGGGAGGGAGAGGCCGACGCGAC 51
                                *    * ** **  *    **     **        * *       *   *

consensus_11665#0      GGAGCGTATTATGCAGTTTTGC-TGTTTCAGAATTA-TGGAACACCCTTTTGCCCATGGA 777
consensus_11665#1      GCGACA-AGTCCACACCCACACACGCACCAGCACCAGCCCAACTCACTCCTCCTCCCCCA 110
                       *   *  * *   **      *  *   *** *  *    *** * **  * * *    *

consensus_11665#0      AACAATGCGACACATGGTTTTATACTA-ATGTATATGTCTCT-CTTTGTTACCTTTTAGC 835
consensus_11665#1      GATTCCGCCGCTCCCTCCCCCTCGCCGCGCGGCGCCGCCGCCGCCGCGGTGGCCACCAGC 170
                        *    **  * *           *     *     * * *  *   * *  *    ***

consensus_11665#0      ATGTTGGATCATGCTGATGCTAATCTCTGCTATTTG----CAGTGAACCATGGGAGGATT 891
consensus_11665#1      AACGTCGAGCTCGCCGTCGCCCAGGCCGGCGGATGAGAGCCAGTGAACCATGGGAGGATT 230
                       *   * ** *  ** *  **  *   * **   *      ********************

consensus_11665#0      TTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTA 951
consensus_11665#1      TTGCTGTTGCCTCTGCACTGACGATTTCGAGGAGTACGCTCATCCAAATAACCCTATCTA 290
                       ************************************************************

consensus_11665#0      TAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGCGGGTATACTGCCAC 1011
consensus_11665#1      TAGGCAAGGTGTATGCCTAAGGAATTTTTTCCACAACTTTTTTGGCGGGTATACTGCCAC 350
                       ************************************************************

consensus_11665#0      ATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATC 1071
consensus_11665#1      ATTCCAGAGGCTCGAATCTAGACCTAGCAACCCAGCTCAAGGGGCTGCTCCATTGGCATC 410
                       ************************************************************

consensus_11665#0      CACTAATCCAAGTACCAATATAACTGACAATTCATTATCCGAAACTTATCACCTTGTGTC 1131
consensus_11665#1      CACTAATCCAAGTACCAATATAACTGACAATTCATTATCCGAAACTTATCACCTTGTGTC 470
                       ************************************************************

consensus_11665#0      CAGACCTCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGT 1191
consensus_11665#1      CAGACCTCCACCGTATGATACTGATCCTAGATATGCCCGTGTTCAAAGAGAGGGTTTGGT 530
                       ************************************************************

consensus_11665#0      ATCTAGGCGTGAAAAGTCTATAAATCTAACACAAGAAGAGTCACTGGCTCTTAGGCGAAA 1251
consensus_11665#1      ATCTAGGCGTGAAAAGTCTATAAATCTAACACAAGAAGAGTCACTGGCTCTTAGGCGAAA 590
                       ************************************************************

consensus_11665#0      TGGCAGCAGCTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACC 1311
consensus_11665#1      TGGCAGCAGCTCTGGCATTGAACATTTAGCTGCTCAGAAGAAATGGAGCAGCACTGAACC 650
                       ************************************************************

consensus_11665#0      TGAGGGTGAATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTA 1371
consensus_11665#1      TGAGGGTGAATATAAAGTCCATCGCTCTGAATCCACCAAGAGTTTATCCGCAAAATCGTA 710
                       ************************************************************

consensus_11665#0      TAACAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGA 1431
consensus_11665#1      TAACAGCAGTTTTGCAGTTGTCACTTCAGAAGATGAAGATGTCTGCCCTACTTGTCTAGA 770
                       ************************************************************

consensus_11665#0      AGAATACACTCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAG 1491
consensus_11665#1      AGAATACACTCCAGACAATCCGAAGATTATAGCTAAATGCTCCCATCATTATCATCTTAG 830
                       ************************************************************

consensus_11665#0      TTGTATCTACGAATGGATGGAAAGAAGTGATACTTGTCCGAATTTGTGGGAAGGAAATGG 1551
consensus_11665#1      TTGTATCTACGAATGGATGGAAAGAAGTGATACTTGTCCGA-TTTGTGGGAAGGAAATGG 889
                       ***************************************** ******************

consensus_11665#0      AGTTTTGTGAAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATC 1611
consensus_11665#1      AGTTTTGTGAAACCCCATGAGAGATTTCTCGCTGGTTGTATCAGTGGAAGGCAAAAGATC 949
                       ************************************************************

consensus_11665#0      TACAGTGTGATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTT 1671
consensus_11665#1      TACAGTGTGATATGCTGGAGAGTCTGTAAATAATACTAGTTGTCCAGATAGATCTCTTTT 1009
                       ************************************************************

consensus_11665#0      TTGAGATCAAATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGA 1731
consensus_11665#1      TTGAGATCAAATTCTTATGTGTACTGAAATCATGGCCTACAAAAAAGAAAATGCGCTAGA 1069
                       ************************************************************

consensus_11665#0      ATTTGATATATGAATATATTTTTGAATGCAAAAAAAAAAA-------------------- 1771
consensus_11665#1      ATTTGATATATGAATATATTTTTGAATGCATTNNCCCCCCCCCCCCCCCNNNNNAAAAAA 1129
                       ******************************                              

consensus_11665#0      ---------------------------
consensus_11665#1      AAAAAAAAAAAAAAAAAAAAAAAAAAA 1156
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)