These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3815 fasta sequence [TCCCTCCATCCTCTCTCGCACTCACCCCGACGCCGCCGCCTCCCTC-----CTCTCTCTCTCTCACTACCTGCGCGCTCGCTCCACCCCGCGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCACCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTGCTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTTCAGGATGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTGCCCAGGAGTACGAGATGTGCGGCAGGGCTCGCT-GCACCCTTA-GCCCGTCCCAGGCCGCTAGGGC-TTTCGGCTT--CCC-GACCACGACCTCTGTCGCGGGCGGTGGGACTGGGGGCGGCTGCGGAGGAGGTGACGCACCCGCTGTGCCG-TTGCTCCGGATGGACCGGTATCGGCCATCATACAATGTGTCGCCAGGGACATACCTGCCGGTGGGCACCGTTCGGGCGCGGCCGGCGGGGTATGATGGTGGAGGGGACATGGACGGGGAGGTGTCGGTAATCCAGTGCATGAAGTGGGGGCTTGTGCCCAGCTTCACCGGCAAGAACGAGAAGCCCGATCATTTCAGGATGTTCAATGCACGGTCAGAGTCTATAAAGGAAAAGGCTTCCTTTCGGCGACTTATCCCAAATAATAGGTGTCTTGTGGCAGTAGAAGGTTTCTACGAATGGAAAAAGGATGGGCCAAAGAAGATGCCGTATTACATTCATTTCCAAGATCAGAGGCCTCTTGTCTTTGCTGCCCTCTTTGACACTTGGACAAACTCGGAAGGTTAGCATGCACATTTGTCAATTAACTTTCTAGTCTTTGGAAGCCATGATTATGGTACTAAGAATGTGTTTCAGTGTAATCACATTTTCTTAAAGTAGTCTTGGGAGTTGCTGCAAAAGATATGTTGTCCTGTTAATGCTGCAGCTTATTTATTCCAACATCTGTGGTTGTAATTACTAATTGGTCTTATTTAGCTTCCTAAAAGGTTTTATCTGCATATATGACATTGTAAATGAAACAAGTTGTAGTATGATATATTTTTGTACTGGTTTAACGCCATGTTTGTAAAGATCTAACATGGTTGCTCAGTTTTGCTTTGTGCCTGCTCTGTCTGCACATAGTTGTAAACATATTATATCCACATCCTGCTTTATATCTAGATCATGTCTTATCATAAGCGGTGCGACAAGTTCATGTTGTCTTGTGATCAAAATTGCAAATATGGATGAACTGTGATAATGAACATTTGCAGGCATGTACTGAACTTGAAGTAGTGCTGTCATCAAGTGTTTCACATTTTTTAAATCTAATTTATGCCATGCGCTGCGCTGCGCTGCGCATTAAATGCCTAACATTATTAATTACATAGAAGAACTGCATTCTGAATAGTACAATATGCATATCATTATGATAGGGAAAAGCTTTCAGATACGAGTTCCACTGTACAATGTCCCAGAACTACATGTTTGGTGTTTGGCTTTTTGATTGTAAAAATAATACGACGTTTTGCTCTACAAATATTGACAGATTTAGTATATAAATTGTCTAGCATGCACTCACACTACCAACTCTTATCTGCTATCCTTTTGTCTACATTTTAAGGAACCATTTTATTAATGCATTTTTTATTGAGCTGAATTATTGATGCATATTTCCAAACACTTTCTGCTGTTCACATACGTCAGTTTATCACATGTTCGGATTAATTGATTATGCCACTTTAGACTTTTGTTGCTCCCATCGGTAAAATGATAATTTACTTGTTTGAGTATTAATATTATCTGCTATTTCCCCAGGAGAAACCATCCATACTTTTACTATTTTGACTACTCGGGCCTCGATTTCTCTAAAATGGCTTCATGGTTAGCTAGATACTCTCTACCCCCCATGATCTCAGATTATTCATATATTTACTATTTCGATACATGTGTGATAAGGCTGCTTTTGAATTGGCTTCATGGTTAGTAGGGTTAATAACAAAACCCTGTTATTTTACACTATATCAAGCTGACATTTATTTGTACACACCTACTCTGGTCTTCGTAGCTAGTGACATTACTGGAAGTTTGTAATGTTTAGCTTGTTAATGCACTGTTCCTATTAATTTTCACTTTACAATATCTTATTTAGAGGCAGGCAAGGAGAAAGCCAGTTGATTTTCAATTAAAAGATAGTATATATCATTGATGATAGTACAATATTGCCTTTAACAGTACTGATGCATCTGTATTTTACTTTATATGATAAGTTGTCCTTGTAGTTCAATTTAATTGAGAAAACAGATTATACCTTTTTCTGGTAATGGATGTATGAAAAATGTTTTTGCCAAGTCTATCAGGTCTTGATATACGAGTACTTATTATACTGTTGCACACAATGTTTTTATGACTTGCTACCTTTTGATTTGATTTGGCACCTTCTGAGTCTGCATGTGACTTAACAGATAGAATGCCAGTAATCTTGGGTGACCAAGACTCCATTAGTACTTGGTTGAACGGTGCATCTGTGAAACTCGAAGAAATTACAGTACCCTATGAAGGAGCAGATCTTGTAAGTTCATGCTTTCATCATTTTATTGGGATTTCCGTGATATGGCTGATATCCTTTTTGGATGTTATTATTTGCTAACTGAACATTGTCTTTAACTTTTTTTAATGACTAGCAAAAATGCATGTGCGATGCAACATGTGAAGACAATTTTAAAAACTATACCAATTTAACAGCAAATAAAAAAAAACAAACGTAACAATGGCATTGAATCTGGTCGCGCTCGCTTCATGCATCATCACATGAAGAATCCTTTATATACACCATTCCATAGCCTTACAAATCGATCGGGTGGCTATGCCGTAAGTTGATGTATGGGTATTTTGCTATACCTCATCAACCAAAGATTGAAATAGGCGTTTCAGACCAGCACTATTGGAAGTTCTCAAAGTCAGGGGTTTACACTTCCAAATCCGCACATGGGACCTTCTTTATCCCAGACGGTCAGGTTTGCTCCTTGGAAAATGATATGGAAGAATTGGGCACCTCTTAAATGTAGGTTTTTTTTCTGTGGCTGACGGATACACAACCATTGTTGGATGACTTATTGTCTTGCCAAGCGTGACTTGCCTCATCTAGCCGCTTGCCCCTTTTGTGATCAAGCGGATGAGACAATGCAACACACTTTGGTTTCTTGTGTTTTCAACAGACAAGTGTGGTCACTAGTTCTTTGAAGTCTGGGCTATTTCTCCACTCTTCCGAACCATGACACGCAAGTTTTCGTGTTGGTTGTCAAAGGCAGTAAAAGGGTTGCGAATGAGCGAGAAGAAAGGGCTTAACTCTCTTATTATCTTGGTCACGTGGGCAATCTGGAAACACAGAAATGCTTGTGTTTCCAATGGTGTTACTCCTAGCATGGCGGATGTGATTCTGTCCATCACTAATGAGGGCACACTATGGTGTATGGCGGGAGCTTCTAGGCTCCAAGAGCTGTTAGCCAAGGCAATAGCTCTTGTGCCCTAGGAGGGGGGCGAATGTGGGTGTGTTTCTTTGTGTTTTTGTTTTTGTAAGTCCGAACATTTATTCTTTGCTTAATGAAATGATATGCACATCTCATGCGTGTTCGAAAAAAAAAGATTCAATTTTGATTATTCAATTAGTGAAAGTCTTTTTGTTTTACTGTAGATGAAAAGCTTTTACAAAGTAACAAACTTACTGTATACATACCTTAAACAATGATAATTTCAAAAGGAAAAAAATATTTATGAGGAGCGAAAT] [+] EMBL OSS1732A [TCCCTCCATCCTCTCTCGCACTCACCCCGACGCCGCCGCCTCCCTC CTCTCTCTCTCTCACTACCTGCGCGCTCGCTCCACCCCGCGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCACCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTGCTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTTCAGGATGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTG CCAGGAGTACGAGATGTGCGG AGGGCTCGCT GCA CCTTAGGCCCGT CCAGGCCG TAGGGT TTTGGGTTT GGG GACCANGA CT TTTNGNGGGCGGTGGG ] [+] EMBL OSS1904A [TCCCTCCATCCTCTCTCGCACTCACCCCGACGCCGCCGCCTCCCTC CTCTCTCTCTCTCACTACCTGCGCGCTCGCTCCACCCCGCGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCACCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTGCTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTTCAGGATGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTGCCCAGGAGTACGAGATGTGCGGCAGGGCTCGCT GCACCCTTA GCCCGTCCCAGGCCGCTAGGGC TTTCGGCTT NCC GACCACGANCTCTGTCGCG ] [+] EMBL AK073255 [ CATCCTCTCTCGCACTCACCCCGACGCCGCCGCCTCCCTC CTCTCTCTCTCTCACTACCTGCGCGCTCGCTCCACCCCGCGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCACCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTGCTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTTCAGGATGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTGCCCAGGAGTACGAGATGTGCGGCAGGGCTCGCT GCACCCTTA GCCCGTCCCAGGCCGCTAGGGC TTTCGGCTT CCC GACCACGACCTCTGTCGCGGGCGGTGGGACTGGGGGCGGCTGCGGAGGAGGTGACGCACCCGCTGTGCCG TTGCTCCGGATGGACCGGTATCGGCCATCATACAATGTGTCGCCAGGGACATACCTGCCGGTGGGCACCGTTCGGGCGCGGCCGGCGGGGTATGATGGTGGAGGGGACATGGACGGGGAGGTGTCGGTAATCCAGTGCATGAAGTGGGGGCTTGTGCCCAGCTTCACCGGCAAGAACGAGAAGCCCGATCATTTCAGGATGTTCAATGCACGGTCAGAGTCTATAAAGGAAAAGGCTTCCTTTCGGCGACTTATCCCAAATAATAGGTGTCTTGTGGCAGTAGAAGGTTTCTACGAATGGAAAAAGGATGGGCCAAAGAAGATGCCGTATTACATTCATTTCCAAGATCAGAGGCCTCTTGTCTTTGCTGCCCTCTTTGACACTTGGACAAACTCGGAAGGTTAGCATGCACATTTGTCAATTAACTTTCTAGTCTTTGGAAGCCATGATTATGGTACTAAGAATGTGTTTCAGTGTAATCACATTTTCTTAAAGTAGTCTTGGGAGTTGCTGCAAAAGATATGTTGTCCTGTTAATGCTGCAGCTTATTTATTCCAACATCTGTGGTTGTAATTACTAATTGGTCTTATTTAGCTTCCTAAAAGGTTTTATCTGCATATATGACATTGTAAATGAAACAAGTTGTAGTATGATATATTTTTGTACTGGTTTAACGCCATGTTTGTAAAGATCTAACATGGTTGCTCAGTTTTGCTTTGTGCCTGCTCTGTCTGCACATAGTTGTAAACATATTATATCCACATCCTGCTTTATATCTAGATCATGTCTTATCATAAGCGGTGCGACAAGTTCATGTTGTCTTGTGATCAAAATTGCAAATATGGATGAACTGTGATAATGAACATTTGCAGGCATGTACTGAACTTGAAGTAGTGCTGTCATCAAGTGTTTCACATTTTTTAAATCTAATTTATGCCATGCGCTGCGCTGCGCTGCGCATTAAATGCCTAACATTATTAATTACATAGAAGAACTGCATTCTGAATAGTACAATATGCATATCATTATGATAGGGAAAAGCTTTCAGATACGAGTTCCACTGTACAATGTCCCAGAACTACATGTTTGGTGTTTGGCTTTTTGATTGTAAAAATAATACGACGTTTTGCTCTACAAATATTGACAGATTTAGTATATAAATTGTCTAGCATGCACTCACACTACCAACTCTTATCTGCTATCCTTTTGTCTACATTTTAAGGAACCATTTTATTAATGCATTTTTTATTGAGCTGAATTATTGATGCATATTTCCAAACACTTTCTGCTGTTCACATACGTCAGTTTATCACATGTTCGGATTAATTGATTATGCCACTTTAGACTTTTGTTGCTCCCATCGGTAAAATGATAATTTACTTGTTTGAGTATTAATATTATCTGCTATTTCCCCAGGAGAAACCATCCATACTTTTACTATTTTGACTACTCGGGCCTCGATTTCTCTAAAATGGCTTCATGGTTAGCTAGATACTCTCTACCCCCCATGATCTCAGATTATTCATATATTTACTATTTCGATACATGTGTGATAAGGCTGCTTTTGAATTGGCTTCATGGTTAGTAGGGTTAATAACAAAACCCTGTTATTTTACACTATATCAAGCTGACATTTATTTGTACACACCTACTCTGGTCTTCGTAGCTAGTGACATTACTGGAAGTTTGTAATGTTTAGCTTGTTAATGCACTGTTCCTATTAATTTTCACTTTACAATATCTTATTTAGAGGCAGGCAAGGAGAAAGCCAGTTGATTTTCAATTAAAAGATAGTATATATCATTGATGATAGTACAATATTGCCTTTAACAGTACTGATGCATCTGTATTTTACTTTATATGATAAGTTGTCCTTGTAGTTCAATTTAATTGAGAAAACAGATTATACCTTTTTCTGGTAATGGATGTATGAAAAATGTTTTTGCCAAGTCTATCAGGTCTTGATATACGAGTACTTATTATACTGTTGCACACAATGTTTTTATGACTTGCTACCTTTTGATTTGATTTGGCACCTTCTGAGTCTGCATGTGACTTAACAGATAGAATGCCAGTAATCTTGGGTGACCAAGACTCCATTAGTACTTGGTTGAACGGTGCATCTGTGAAACTCGAAGAAATTACAGTACCCTATGAAGGAGCAGATCTTGTAAGTTCATGCTTTCATCATTTTATTGGGATTTCCGTGATATGGCTGATATCCTTTTTGGATGTTATTATTTGCTAACTGAACATTGTCTTTAACTTTTTTTAATGACTAGCAAAAATGCATGTGCGATGCAACATGTGAAGACAATTTTAAAAACTATACCAATTTAACAGCAAATAAAAAAAAACAAACGTAACAATGGCATTGAATCTGGTCGCGCTCGCTTCATGCATCATCACATGAAGAATCCTTTATATACACCATTCCATAGCCTTACAAATCGATCGGGTGGCTATGCCGTAAGTTGATGTATGGGTATTTTGCTATACCTCATCAACCAAAGATTGAAATAGGCGTTTCAGACCAGCACTATTGGAAGTTCTCAAAGTCAGGGGTTTACACTTCCAAATCCGCACATGGGACCTTCTTTATCCCAGACGGTCAGGTTTGCTCCTTGGAAAATGATATGGAAGAATTGGGCACCTCTTAAATGTAGGTTTTTTTTCTGTGGCTGACGGATACACAACCATTGTTGGATGACTTATTGTCTTGCCAAGCGTGACTTGCCTCATCTAGCCGCTTGCCCCTTTTGTGATCAAGCGGATGAGACAATGCAACACACTTTGGTTTCTTGTGTTTTCAACAGACAAGTGTGGTCACTAGTTCTTTGAAGTCTGGGCTATTTCTCCACTCTTCCGAACCATGACACGCAAGTTTTCGTGTTGGTTGTCAAAGGCAGTAAAAGGGTTGCGAATGAGCGAGAAGAAAGGGCTTAACTCTCTTATTATCTTGGTCACGTGGGCAATCTGGAAACACAGAAATGCTTGTGTTTCCAATGGTGTTACTCCTAGCATGGCGGATGTGATTCTGTCCATCACTAATGAGGGCACACTATGGTGTATGGCGGGAGCTTCTAGGCTCCAAGAGCTGTTAGCCAAGGCAATAGCTCTTGTGCCCTAGGAGGGGGGCGAATGTGGGTGTGTTTCTTTGTGTTTTTGTTTTTGTAAGTCCGAACATTTATTCTTTGCTTAATGAAATGATATGCACATCTCATGCGTGTTCGAAAAAAAAAGATTCAATTTTGATTATTCAATTAGTGAAAGTCTTTTTGTTTTACTGTAGATGAAAAGCTTTTACAAAGTAACAAACTTACTGTATACATACCTTAAACAATGATAATTTCAAAAGGAAAAAAATATTTATGAGGAGCGAAAT] [+] EMBL CF291671 [ CATCCTCTCTCGCACTCACCCCGACGCCGCCGCCTCCCTC CTCTCTCTCTCTCACTACCTGCGCGCTCGCTCCACCCCGCGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCACCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTGCTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTTCAGGATGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTGCCCAGGAGTACGAGATGTGCGGCAGGGCTCGCT GCACCCTTA GCCCGTCCCAGGCCGCTAGGGC TTTCGGCTT CCC GACCACGACCTCTGTCGCGGGCGGTGGGACTGGGGGCGGCTGCGGAGGAGGTGACGCACCCGCTGTGCCG TTGCTCCGGATGGACCGGTATCGGCCATCATACAATGTGTCGCCAGGGAC ] [+] EMBL AU161234 [ TCTCTCGCACTCACCCCGACGCCGCCGCCTCCCTC CTCTCTCTCTCTCACTACCTGCGCGCTCGCTCCACCCCGCGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCACCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTGCTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTTCAGGATGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTGCCCAGGAGTACGAGATGTGCGGCAGGGCTCGCTGGCACCCTTA GCCCGTCCCAGGCCGCTAAGGCTTTTCGGCTTTCCCCGGACCACGA CTCTGTCGCGGGCGGTGGGATGGGGGGCGGCTGCGGAGGAAGTGACGCAACCGCTGTGCCGTTTGCTNCGGATGGAACG ] [+] EMBL CB632212 [ CACTCA TCCGACGCCGGCGCCTCCCTCCTTCTCTCTCTCTCTCTCACTACCTGGGCGCTCGCTCCACCCCGGGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCACCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTGCTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTGCAGGATGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTGCCCAGGAGTACGAGATGTGCGGCAGGGCTCGCT GCACCCTTA GCCCGTCCCAGGCCGCTAGGGC TTTCGGCTT CCC GACCACTACCCTTGTCGCGGGCGGTGGGACTGGGGGCGGCTGCGGAGGAGGTGACGCACCCGCTGTGCCG TTGCTCCGGATGGACCGGTATCGGCCATCATACAATGTGTCGCCAGGGACATACCTGCCGGTGGGCACCGTTCGGGCGCGGCCGGCGGGGTATGATGGTGGAGGGGACATGGACGGGGAGGTGTCGGTAATCCAGTGCATGAAGTGGGGGCTTGGGCCCAGCTTCACCGGCAAGAAGGAGAAGCCCGATCATTTCAGGATGTTCTATGCACGGTCAGAGTCTATAAAGGAAAAGGCTTCCTTTC ] consensusID : consensus_11667#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence [CAGGGACATACCTGCCGGTGGGCACCGTTCGGGCGCGGCCGGCGGGGTATGATGGTGGAGGGGACATGGACGGGGAGGTGTCGGTAATCCAGTGCATGAAGTGGGGGCTTGTGCCCAGCTTCACCGGCAAGAACGAGAAGCCCGATCATTTCAGGATGTTCAATGCACGGTCAGAGTCTATAAAGGAAAAGGCTTCCTTTCGGCGACTTATCCCAAATAATAGGTGTCTTGTGGCAGTAGAAGGGTATGCACAAAATAGTTGTCTCCTTTTATTTGGAACTTCCAACTATCATATGCTTTGTTAAAGTTTTGCATGAGCATGCTTTGATTTACCCCTTGAAGTTGGTACAGTATGCATGTACTTGCTCAATATTTGCTTGCATTGATGGAGGCTAAAAGGCTACAGAATGATTTGCACCTGGATGTAAAATTTGACATCTGGATTTATAGTAGTTTGATATAACTTCTGTCCTGCTCAAAAAAAAAAAAAAA] [-] EMBL CF291670 [CAGGGACATACCTGCCGGTGGGCACCGTTCGGGCGCGGCCGGCGGGGTATGATGGTGGAGGGGACATGGACGGGGAGGTGTCGGTAATCCAGTGCATGAAGTGGGGGCTTGTGCCCAGCTTCACCGGCAAGAACGAGAAGCCCGATCATTTCAGGATGTTCAATGCACGGTCAGAGTCTATAAAGGAAAAGGCTTCCTTTCGGCGACTTATCCCAAATAATAGGTGTCTTGTGGCAGTAGAAGGGTATGCACAAAATAGTTGTCTCCTTTTATTTGGAACTTCCAACTATCATATGCTTTGTTAAAGTTTTGCATGAGCATGCTTTGATTTACCCCTTGAAGTTGGTACAGTATGCATGTACTTGCTCAATATTTGCTTGCATTGATGGAGGCTAAAAGGCTACAGAATGATTTGCACCTGGATGTAAAATTTGACATCTGGATTTATAGTAGTTTGATATAACTTCTGTCCTGCTCAAAAAAAAAAAAAAA] consensusID : consensus_11667#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 312 fasta sequence [ATATGCTTTGTTAAAGTTTTGCATGAGCATGCTCTGATTTACCCCTTGAAGTTGGTACAGTATGCATGTACTTGCTCAATATTTGCTTGCATTGATAGAGGCTAAAAGGCTACAGAATGATTTGCACCTGGATGTAATTTTTGACATCTGGATTTATAGTAGTTTGATATAACTTCTGTCCTGCTCTTCTTGCTTTCCGTGTCTCGCTCCATCCTTCTGTCATATAGTGGTGCTAATCGATGAGTGACATGCCAATTGTAGGATTTGACATAGGACTGTAGGTTTAGATGTGCTTGATTTTCCTCATTCCAA] [+] EMBL CF306175 [ATATGCTTTGTTAAAGTTTTGCATGAGCATGCTCTGATTTACCCCTTGAAGTTGGTACAGTATGCATGTACTTGCTCAATATTTGCTTGCATTGATAGAGGCTAAAAGGCTACAGAATGATTTGCACCTGGATGTAATTTTTGACATCTGGATTTATAGTAGTTTGATATAACTTCTGTCCTGCTCTTCTTGCTTTCCGTGTCTCGCTCCATCCTTCTGTCATATAGTGGTGCTAATCGATGAGTGACATGCCAATTGTAGGATTTGACATAGGACTGTAGGTTTAGATGTGCTTGATTTTCCTCATTCCAA] [+] EMBL CF306013 [ATATGCTTTGTTAAAGTTTTGCATGAGCATGCTCTGATTTACCCCTTGAAGTTGGTACAGTATGCATGTACTTGCTCAATATTTGCTTGCATTGATAGAGGCTAAAAGGCTACAGAATGATTTGCACCTGGATGTATTTTTTGACATCTGGATTTATAGTAGTTTGATATAACTTCTGTTCTTCTCTTCTTGCTTTCCGTGTCTCGCTCCATCCTTCTGTCATATAGTGGTGCTAATCGATGAGTGACATGCCAATTGTAGGATTTGACATAGGACTGTAGGTTTAGATGTGCTTGATTTTCCTCATTCCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TCCCTCCATCCTCTCTCGCACTCACCCCGACGCCGCCGCCTCCCTCCTCTCTCTCTCTCA 60 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CTACCTGCGCGCTCGCTCCACCCCGCGCCCTAATCTCCGTCACGCCCTTCGCAAGCACCA 120 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CCATTGCCGTCGCCGCCGCCGCCGCCGCCCGTCGTGGCCTCCCCTCCGTGCGCCCGGTTG 180 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CTCCTTCACATCCTGATGAGAGAAAAGAGGGATGGGAAGAAAATGGCATTATGTTCAGGA 240 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TGATGCGATGCTCTGACCATTTTACACTGTTCTTCTCAGGTTTGCCCAGGAGTACGAGAT 300 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GTGCGGCAGGGCTCGCTGCACCCTTAGCCCGTCCCAGGCCGCTAGGGCTTTCGGCTTCCC 360 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GACCACGACCTCTGTCGCGGGCGGTGGGACTGGGGGCGGCTGCGGAGGAGGTGACGCACC 420 consensus_11667#1 -----------------------------------------------------CAGGGAC 7 consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CGCTGTGCCGTTGCTCCGGATGGACCGGTATCGGCCATCATACAATGTGTCGCCAGGGAC 480 consensus_11667#1 ATACCTGCCGGTGGGCACCGTTCGGGCGCGGCCGGCGGGGTATGATGGTGGAGGGGACAT 67 consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 ATACCTGCCGGTGGGCACCGTTCGGGCGCGGCCGGCGGGGTATGATGGTGGAGGGGACAT 540 consensus_11667#1 GGACGGGGAGGTGTCGGTAATCCAGTGCATGAAGTGGGGGCTTGTGCCCAGCTTCACCGG 127 consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GGACGGGGAGGTGTCGGTAATCCAGTGCATGAAGTGGGGGCTTGTGCCCAGCTTCACCGG 600 consensus_11667#1 CAAGAACGAGAAGCCCGATCATTTCAGGATGTTCAATGCACGGTCAGAGTCTATAAAGGA 187 consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CAAGAACGAGAAGCCCGATCATTTCAGGATGTTCAATGCACGGTCAGAGTCTATAAAGGA 660 consensus_11667#1 AAAGGCTTCCTTTCGGCGACTTATCCCAAATAATAGGTGTCTTGTGGCAGTAGAAGGGT- 246 consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AAAGGCTTCCTTTCGGCGACTTATCCCAAATAATAGGTGTCTTGTGGCAGTAGAAGGTTT 720 consensus_11667#1 --ATGCACAAAATAGTTGTCTCCTTTTATTTGGAACTTCCAACTATCATATGCTTTGTTA 304 consensus_11667#2 -----------------------------------------------ATATGCTTTGTTA 13 consensus_11667#0 CTACGAATGGAAAAAGGATGGGCCAAAGAAGATGCCGTATTACATTCATTTCCAAGATCA 780 ** * * * * consensus_11667#1 AAG---TTTTGCATGAGCATGCTTTGATTTACCCCTTGA--AGTTGGTACAGTATGCATG 359 consensus_11667#2 AAG---TTTTGCATGAGCATGCTCTGATTTACCCCTTGA--AGTTGGTACAGTATGCATG 68 consensus_11667#0 GAGGCCTCTTGTCTTTGC-TGCCCTCTTTGACACTTGGACAAACTCGGAAGGTTAGCATG 839 ** * *** * ** *** * ** ** * * ** * * * * ** ***** consensus_11667#1 TAC-TTGCTCAAT--ATTTGCTTG-CATTGATGGAGGCTAAAAGGCTAC--AGAATGATT 413 consensus_11667#2 TAC-TTGCTCAAT--ATTTGCTTG-CATTGATAGAGGCTAAAAGGCTAC--AGAATGATT 122 consensus_11667#0 CACATTTGTCAATTAACTTTCTAGTCTTTGGAAGCCATGATTATGGTACTAAGAATGTGT 899 ** ** ***** * ** ** * * *** * * * * *** ****** * consensus_11667#1 TGCACCTGGAT-GTAAAATTTGACATCTGGATTTATAGTAGTTTGATATAACTT-CTGTC 471 consensus_11667#2 TGCACCTGGAT-GTAATTTTTGACATCTGGATTTATAGTAGTTTGATATAACTT-CTGTC 180 consensus_11667#0 TTCAGTGTAATCACATTTTCTTAAAGTAGTCTTGGGAGTTGCTGCAAAAGATATGTTGTC 959 * ** ** * * * * * * ** *** * * * * * * **** consensus_11667#1 CTGCTCAAAAAAAAAAAAAAA--------------------------------------- 492 consensus_11667#2 CTGCTCTTCTTGCTTTCCGTGTCTCGCTCCATCCTT-----CTGTCATATAGTGGTGCTA 235 consensus_11667#0 CTGTTAATGCTGCAGCTTATTTATTCCAACATCTGTGGTTGTAATTACTAATTGGTCTTA 1019 *** * consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ATCGATGAGTGACATG--CCAATTGTAGGATTTGACATAG-GACTG---TAGGTTTAGAT 289 consensus_11667#0 TTTAGCTTCCTAAAAGGTTTTATCTGCATATATGACATTGTAAATGAAACAAGTTGTAGT 1079 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 GTGCTTGATTTTCCTCAT--TCCAA----------------------------------- 312 consensus_11667#0 ATGATATATTTTTGTACTGGTTTAACGCCATGTTTGTAAAGATCTAACATGGTTGCTCAG 1139 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TTTTGCTTTGTGCCTGCTCTGTCTGCACATAGTTGTAAACATATTATATCCACATCCTGC 1199 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TTTATATCTAGATCATGTCTTATCATAAGCGGTGCGACAAGTTCATGTTGTCTTGTGATC 1259 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AAAATTGCAAATATGGATGAACTGTGATAATGAACATTTGCAGGCATGTACTGAACTTGA 1319 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AGTAGTGCTGTCATCAAGTGTTTCACATTTTTTAAATCTAATTTATGCCATGCGCTGCGC 1379 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TGCGCTGCGCATTAAATGCCTAACATTATTAATTACATAGAAGAACTGCATTCTGAATAG 1439 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TACAATATGCATATCATTATGATAGGGAAAAGCTTTCAGATACGAGTTCCACTGTACAAT 1499 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GTCCCAGAACTACATGTTTGGTGTTTGGCTTTTTGATTGTAAAAATAATACGACGTTTTG 1559 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CTCTACAAATATTGACAGATTTAGTATATAAATTGTCTAGCATGCACTCACACTACCAAC 1619 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TCTTATCTGCTATCCTTTTGTCTACATTTTAAGGAACCATTTTATTAATGCATTTTTTAT 1679 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TGAGCTGAATTATTGATGCATATTTCCAAACACTTTCTGCTGTTCACATACGTCAGTTTA 1739 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TCACATGTTCGGATTAATTGATTATGCCACTTTAGACTTTTGTTGCTCCCATCGGTAAAA 1799 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TGATAATTTACTTGTTTGAGTATTAATATTATCTGCTATTTCCCCAGGAGAAACCATCCA 1859 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TACTTTTACTATTTTGACTACTCGGGCCTCGATTTCTCTAAAATGGCTTCATGGTTAGCT 1919 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AGATACTCTCTACCCCCCATGATCTCAGATTATTCATATATTTACTATTTCGATACATGT 1979 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GTGATAAGGCTGCTTTTGAATTGGCTTCATGGTTAGTAGGGTTAATAACAAAACCCTGTT 2039 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 ATTTTACACTATATCAAGCTGACATTTATTTGTACACACCTACTCTGGTCTTCGTAGCTA 2099 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GTGACATTACTGGAAGTTTGTAATGTTTAGCTTGTTAATGCACTGTTCCTATTAATTTTC 2159 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 ACTTTACAATATCTTATTTAGAGGCAGGCAAGGAGAAAGCCAGTTGATTTTCAATTAAAA 2219 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GATAGTATATATCATTGATGATAGTACAATATTGCCTTTAACAGTACTGATGCATCTGTA 2279 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TTTTACTTTATATGATAAGTTGTCCTTGTAGTTCAATTTAATTGAGAAAACAGATTATAC 2339 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CTTTTTCTGGTAATGGATGTATGAAAAATGTTTTTGCCAAGTCTATCAGGTCTTGATATA 2399 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CGAGTACTTATTATACTGTTGCACACAATGTTTTTATGACTTGCTACCTTTTGATTTGAT 2459 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TTGGCACCTTCTGAGTCTGCATGTGACTTAACAGATAGAATGCCAGTAATCTTGGGTGAC 2519 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CAAGACTCCATTAGTACTTGGTTGAACGGTGCATCTGTGAAACTCGAAGAAATTACAGTA 2579 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CCCTATGAAGGAGCAGATCTTGTAAGTTCATGCTTTCATCATTTTATTGGGATTTCCGTG 2639 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 ATATGGCTGATATCCTTTTTGGATGTTATTATTTGCTAACTGAACATTGTCTTTAACTTT 2699 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TTTTAATGACTAGCAAAAATGCATGTGCGATGCAACATGTGAAGACAATTTTAAAAACTA 2759 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TACCAATTTAACAGCAAATAAAAAAAAACAAACGTAACAATGGCATTGAATCTGGTCGCG 2819 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CTCGCTTCATGCATCATCACATGAAGAATCCTTTATATACACCATTCCATAGCCTTACAA 2879 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 ATCGATCGGGTGGCTATGCCGTAAGTTGATGTATGGGTATTTTGCTATACCTCATCAACC 2939 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AAAGATTGAAATAGGCGTTTCAGACCAGCACTATTGGAAGTTCTCAAAGTCAGGGGTTTA 2999 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CACTTCCAAATCCGCACATGGGACCTTCTTTATCCCAGACGGTCAGGTTTGCTCCTTGGA 3059 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AAATGATATGGAAGAATTGGGCACCTCTTAAATGTAGGTTTTTTTTCTGTGGCTGACGGA 3119 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TACACAACCATTGTTGGATGACTTATTGTCTTGCCAAGCGTGACTTGCCTCATCTAGCCG 3179 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 CTTGCCCCTTTTGTGATCAAGCGGATGAGACAATGCAACACACTTTGGTTTCTTGTGTTT 3239 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TCAACAGACAAGTGTGGTCACTAGTTCTTTGAAGTCTGGGCTATTTCTCCACTCTTCCGA 3299 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 ACCATGACACGCAAGTTTTCGTGTTGGTTGTCAAAGGCAGTAAAAGGGTTGCGAATGAGC 3359 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GAGAAGAAAGGGCTTAACTCTCTTATTATCTTGGTCACGTGGGCAATCTGGAAACACAGA 3419 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AATGCTTGTGTTTCCAATGGTGTTACTCCTAGCATGGCGGATGTGATTCTGTCCATCACT 3479 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 AATGAGGGCACACTATGGTGTATGGCGGGAGCTTCTAGGCTCCAAGAGCTGTTAGCCAAG 3539 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 GCAATAGCTCTTGTGCCCTAGGAGGGGGGCGAATGTGGGTGTGTTTCTTTGTGTTTTTGT 3599 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TTTTGTAAGTCCGAACATTTATTCTTTGCTTAATGAAATGATATGCACATCTCATGCGTG 3659 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TTCGAAAAAAAAAGATTCAATTTTGATTATTCAATTAGTGAAAGTCTTTTTGTTTTACTG 3719 consensus_11667#1 ------------------------------------------------------------ consensus_11667#2 ------------------------------------------------------------ consensus_11667#0 TAGATGAAAAGCTTTTACAAAGTAACAAACTTACTGTATACATACCTTAAACAATGATAA 3779 consensus_11667#1 ------------------------------------ consensus_11667#2 ------------------------------------ consensus_11667#0 TTTCAAAAGGAAAAAAATATTTATGAGGAGCGAAAT 3815 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||