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Oryza sativa
cluster # 11671 cluster # 11671       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11671#0 length = 2041 sequences # 7  
consensus_11671#1 length = 328 sequences # 2  

consensusID : consensus_11671#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2041
fasta sequence
                              [GTCGTCTTCACTTCACTTCACGCACGCTCAGATCCAGCCTCGCTTCGCTGCCCCCCACCTCCATGGCGGCCGTGTCGGCGGCGGCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGGCCGTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACCGCGGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCCTCTACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCGCCGCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGGATGCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATCGTGAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATCTTGCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATCCTGGCTGGCCACAGTTGCTTTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTACCTTCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTGATCCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGTATCTTCCTGGTCGGATGGCACCTCTTAAGAACTTTTTTGGAATTATGTCATTCGCTTTTGTTGTACTTGGGATTTATTGGTTCTATCAGTACATGAAGTTTTGGCGTGAAGTTCTGCCACTGCAAAACTGTATTACTCTTGTCATTACATTGGGCATGCTTGAGATGTCATTGTGGTATTTTGAGTATGCTGAGTTCAACGAGACTGGTGTTCGACCAAAGGGCATCACATTTTGGGCTGTAACATTTGGGACTGTTAAAAGAACAGTAGCCCGTGTTATTATTCTCATTGTCTCAATGGGATATGGAGTTGTCAGGCCTAGTTTGGGTGGTCTCACATCAAAGGTGGTTATGCTTGGAGGAACATTCTTTTTAGCTACGGAAATCCTTGAATTGGTAGAAAATCTTGGTGCCGTAAATGATCTATCTGGAAAAGCTCGATTGTTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCATTCGTTGTTTGGATTTTTATTTCGCTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGTCAATGGCCAAACTTGACATTTACAGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGGTGTCTATTGGCTGGATTGGCTATGAGATTTACTTCAAATCAACAGATGTATTCAATGAACGATGGCAGTATGCATGGATAATTCCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTTGTGTCATTTCATACCTGTGGGCGCCGTCACAGAACTCAATGAGGTTTACCTAT-GATGCAAGCGAAAACTTTGATCGAGAGGACAGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCAAGAACGGGTGGAGTTTATCTTCTTCACCAGACACCAAAGCAACAAAGAACGTTACAGTTACATCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACACTTTACTAATTCTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTTCCTCCAT-ATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATTTATCTATGCCATCCAGAGGATGTGTGGTGTATAATGTGTATTTTTGTAGATTTGATGCTGCTTCTGGTTTATGTGAACTCCAAGATTGTCATGTACGGTAGAAGAGAATGTTGTTTTTCTGTGTTTTATTTATTTAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK105702             [GTCGTCTTCACTTCACTTCACGCACGCTCAGATCCAGCCTCGCTTCGCTGCCCCCCACCTCCATGGCGGCCGTGTCGGCGGCGGCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGGCCGTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACCGCGGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCCTCTACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCGCCGCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGGATGCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATCGTGAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATCTTGCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATCCTGGCTGGCCACAGTTGC TTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTACCTTCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTGATCCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGTATCTTCCTGGTCGGATGGCACCTCTTAAGAACTTTTTTGGAATTATGTCATTCGCTTTTGTTGTACTTGGGATTTATTGGTTCTATCAGTACATGAAGTTTTGGCGTGAAGTTCTGCCACTGCAAAACTGTATTACTCTTGTCATTACATTGGGCATGCTTGAGATGTCATTGTGGTATTTTGAGTATGCTGAGTTCAACGAGACTGGTGTTCGACCAAAGGGCATCACATTTTGGGCTGTAACATTTGGGACTGTTAAAAGAACAGTAGCCCGTGTTATTATTCTCATTGTCTCAATGGGATATGGAGTTGTCAGGCCTAGTTTGGGTGGTCTCACATCAAAGGTGGTTATGCTTGGAGGAACATTCTTTTTAGCTACGGAAATCCTTGAATTGGTAGAAAATCTTGGTGCCGTAAATGATCTATCTGGAAAAGCTCGATTGTTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCATTCGTTGTTTGGATTTTTATTTCGCTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGTCAATGGCCAAACTTGACATTTACAGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGGTGTCTATTGGCTGGATTGGCTATGAGATTTACTTCAAATCAACAGATGTATTCAATGAACGATGGCAGTATGCATGGATAATTCCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTTGTGTCATTTCATACCTGTGGGCGCCGTCACAGAACTCAATGAGGTTTACCTAT GATGCAAGCGAAAACTTTGATCGAGGGGACAGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCAAGAACGGGTGGAGTTTATCTTCTTCACCAGACACCAAAGCAACAAAGAACGTTACAGTTACATCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACACTTTACTAATTCTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTTCCTCCAT ATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATT                                                                                                                                                               ]
[+] EMBL AK120805             [                               ATCCAGCCTCGCTTCGCTGCCCCCCACCTCCATGGCGGCCGTGTCGGCGGCGGCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGGCCGTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACCGCGGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCCTCTACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCGCCGCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGGATGCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATCGTGAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATCTTGCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATCCTGGCTGGCCACAGTTGCTTTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTACCTTCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTGATCCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGTATCTTCCTGGTCGGATGGCACCTCTTAAGAACTTTTTTGGAATTATGTCATTCGCTTTTGTTGTACTTGGGATTTATTGGTTCTATCAGTACATGAAGTTTTGGCGTGAAGTTCTGCCACTGCAAAACTGTATTACTCTTGTCATTACATTGGGCATGCTTGAGATGTCATTGTGGTATTTTGAGTATGCTGAGTTCAACGAGACTGGTGTTCGACCAAAGGGCATCACATTTTGGGCTGTAACATTTGGGACTGTTAAAAGAACAGTAGCCCGTGTTATTATTCTCATTGTCTCAATGGGATATGGAGTTGTCAGGCCTAGTTTGGGTGGTCTCACATCAAAGGTGGTTATGCTTGGAGGAACATTCTTTTTAGCTACGGAAATCCTTGAATTGGTAGAAAATCTTGGTGCCGTAAATGATCTATCTGGAAAAGCTCGATTGTTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCATTCGTTGTTTGGATTTTTATTTCGCTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGTCAATGGCCAAACTTGACATTTACAGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGGTGTCTATTGGCTGGATTGGCTATGAGATTTACTTCAAATCAACAGATGTATTCAATGAACGATGGCAGTATGCATGGATAATTCCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTTGTGTCATTTCATACCTGTGGGCGCCGTCACAGAACTCAATGAGGTTTACCTAT GATGCAAGCGAAAACTTTGATCGAGAGGACAGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCAAGAACGGGTGGAGTTTATCTTCTTCACCAGACACCAAAGCAACAAAGAACGTTACAGTTACATCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACACTTTACTAATTCTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTTCCTCCAT ATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATTTATCTATGCCATCCAGAGGATGTGTGGTGTATAATGTGTATTTTTGTAGATTTGATGCTGCTTCTGGTTTATGTGAACTCCAAGATTGTCATGTACGGTAGAAGAGAATGTTGTTTTTCTGTGTTTTATTTATTT                        ]
[+] EMBL AK119953             [                                 CCAGCCTCGCTTCGCTGCCCCCCACCTCCATGGCGGCCGTGTCGGCGGCGGCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGGCCGTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACCGCGGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCCTCTACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCGCCGCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGGGTGCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATCGTGAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATCTTGCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATCCTGGCTGGCCACAGTTGCTTTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTACCTTCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTGATCCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGTATCTTCCTGGTCGGATGGCACCTCTTAAGAACTTTTTTGGAATTATGTtctgatt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU097638             [                                                                                               CACCACCTCCTGAGCCTCTGCGTGGCCGTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACCGCGGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCCTCTACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCGCCGCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGGATGCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATCGTGAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATCTTGCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATCCTGGCTGGCCACAGTTGCTTTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTACCTTCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTGATCCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGTATCTTCCTGGTCGGATGGCANCTCTTAAGAACTTTTTTGGAATTATGTCAATCGCTTTTGTTGTAATTGGGATTTAATGGTTCTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU056684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTGTTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCATTCGTTGTTTGGATTTTTATTTCGCTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGTCAATGGCCAAACTTGACATTTACAGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGGTGTCTATTGGCTGGATTGGCTATGAGATTTACTTCAAATCAACAGATGTATTCAATGAACGATGGCAGTATGCATGGATAATTCCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTTGTGTCATTTCATACCTGTGGGCGCCGTCACAGAACTCAATGAGGTTTACCTATGGATGCAAGCGAAAACTTTGATCGAGAGGACAGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCAAGAACGGGTGGAGTTTATCTTCTTCACCAGACACCAAAGCAACAAAGAACGTTACAGTTACATCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACACTTTACTAATTCTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTTCCTCCATAATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTAT                                                                                                                                                                                            ]
[-] EMBL CB669095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCAGTATGCATGGATAATTCCTGTGTTTTGGCATGTCTTGTCTTTCTCACTTCTTAGTGTCATTTCATACCTGTGGGCGCGGTCACAGAACTCAATGAGGTTTACGTAT GATGCAAGCGAAAACTTTGATCGAGAGGACAGTTTGTCACTAATAAGGCCAGGTCCCATTGCTTCCAAGAACGGGTGGAGTTTATTTTGTTCACCAGACACCAAAGCAACAAAGAACGTTTCAGTTACATCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTCATGAGGGAGAGAAGATACACCCACATTCAAATTTTGGTATGCAGCAGATCACACTTTAGTAATTTTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTTCCTCCAT ATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATTTATCTATGCCATCCAGAGGATGTGTGGTGTATAATGTGTATTTTTGTAGATTTGATGCTGCTTTTGGTTTATGTGAACTCCAAGATTGTCATGTACGGTAGAAGAGAATGTT TAAGGGTGTGTTTTATTTATTTA                       ]
[+] EMBL AU056685             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAGGGGCACTGTGCATTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATNCAGCAGATCACACTTTACTAATTCTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTTCCTCCAT ATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATTTATCTATGCCATCCAGAGGATGTGTGGTGTATAATGTGTATTTTTGTAGATTTGATGCTGCTTCTGGTTTATGTGAACTCCAAGATTGTCATGTACGGTAGAAGAGAATGTTGTTTTTCTGTGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11671#0 GTCGTCTTCACTTCACTTCACGCACGCTCAGATCCAGCCTCGCTTCGCTGCCCCCCACCT CCATGGCGGCCGTGTCGGCGGCGGCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGG CCGTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACC GCGGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCC TCTACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCG CCGCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGG ATGCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATC GTGAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATC TTGCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATC CTGGCTGGCCACAGTTGCTTTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTAC CTTCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTG ATCCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGT ATCTTCCTGGTCGGATGGCACCTCTTAAGAACTTTTTTGGAATTATGTCATTCGCTTTTG TTGTACTTGGGATTTATTGGTTCTATCAGTACATGAAGTTTTGGCGTGAAGTTCTGCCAC TGCAAAACTGTATTACTCTTGTCATTACATTGGGCATGCTTGAGATGTCATTGTGGTATT TTGAGTATGCTGAGTTCAACGAGACTGGTGTTCGACCAAAGGGCATCACATTTTGGGCTG TAACATTTGGGACTGTTAAAAGAACAGTAGCCCGTGTTATTATTCTCATTGTCTCAATGG GATATGGAGTTGTCAGGCCTAGTTTGGGTGGTCTCACATCAAAGGTGGTTATGCTTGGAG GAACATTCTTTTTAGCTACGGAAATCCTTGAATTGGTAGAAAATCTTGGTGCCGTAAATG ATCTATCTGGAAAAGCTCGATTGTTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCAT TCGTTGTTTGGATTTTTATTTCGCTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGT CAATGGCCAAACTTGACATTTACAGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGG TGTCTATTGGCTGGATTGGCTATGAGATTTACTTCAAATCAACAGATGTATTCAATGAAC GATGGCAGTATGCATGGATAATTCCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTT GTGTCATTTCATACCTGTGGGCGCCGTCACAGAACTCAATGAGGTTTACCTATGATGCAA GCGAAAACTTTGATCGAGAGGACAGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCA AGAACGGGTGGAGTTTATCTTCTTCACCAGACACCAAAGCAACAAAGAACGTTACAGTTA CATCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTC ATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACACTTTACT AATTCTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTT CCTCCATATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTATGGATGAT GATATATATGATAGGAACAATTTATCTATGCCATCCAGAGGATGTGTGGTGTATAATGTG TATTTTTGTAGATTTGATGCTGCTTCTGGTTTATGTGAACTCCAAGATTGTCATGTACGG TAGAAGAGAATGTTGTTTTTCTGTGTTTTATTTATTTAAAAAAAAAAAAAAAAAAAAAAA A



consensusID : consensus_11671#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 328
fasta sequence
                              [TTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACNCTTTACNAANT-CNAGTTGTCGGGATACCCCAAGGGAATTATGGAAGTAANCTTTATTGAANTCATTTCCCCCATANAGTAGTTTTTCACACGGTGCNCCNCGTTANAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATTTATCTATGCCATCCANAGGATNTGTGGTGTATAATGTGTATTTTTGTANATTTGATGCTGCTTCTGGTTTNTGTGAACNCCNANATTGTCNTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU197493             [TTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACNCTTTACNAANT CNAGTTGTCGGGATACCCCAAGGGAATTATGGAAGTAANCTTTATTGAANTCATTTCCCCCATANAGTAGTTTTTCACACGGTGCNCCNCGTTANAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATTTATCTATGCCATCCANAGGATNTGTGGTGTATAATGTGTATTTTTGTANATTTGATGCTGCTTCTGGTTTNTGTGAACNCCNANATTGTCNTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU181122             [  TCATTGNGGAGAGAAGATACANCCCCANTCAAAATTTGGTATGCAGCAGATCACACCTTACTAATTCCTAGTTGTCGGGANACNCCAAGGGAATTATGGAAGTAANCTTTATTGAANTCATTTCCNCCATANAGTANTTTTTCACACGGTGCNCCNCGTTANAGGCATCACTGTATGGATGATGATATATATGANAGGNACAATTTANCTATGCCANCCANAGGATNTGTGGTGTATAATGTGTATTTTTGTANATTTGATGCTGCTTCTGGTTTNTGTGAACNCCAANATTGTCNTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11671#1 TTTCATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACNCTT TACNAANTCNAGTTGTCGGGATACCCCAAGGGAATTATGGAAGTAANCTTTATTGAANTC ATTTCCCCCATANAGTAGTTTTTCACACGGTGCNCCNCGTTANAGGCATCACTGTATGGA TGATGATATATATGATAGGAACAATTTATCTATGCCATCCANAGGATNTGTGGTGTATAA TGTGTATTTTTGTANATTTGATGCTGCTTCTGGTTTNTGTGAACNCCNANATTGTCNTGT AAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11671#0      GTCGTCTTCACTTCACTTCACGCACGCTCAGATCCAGCCTCGCTTCGCTGCCCCCCACCT 60
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      CCATGGCGGCCGTGTCGGCGGCGGCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGG 120
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      CCGTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACC 180
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      GCGGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCC 240
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TCTACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCG 300
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      CCGCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGG 360
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      ATGCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATC 420
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      GTGAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATC 480
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TTGCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATC 540
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      CTGGCTGGCCACAGTTGCTTTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTAC 600
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      CTTCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTG 660
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      ATCCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGT 720
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      ATCTTCCTGGTCGGATGGCACCTCTTAAGAACTTTTTTGGAATTATGTCATTCGCTTTTG 780
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TTGTACTTGGGATTTATTGGTTCTATCAGTACATGAAGTTTTGGCGTGAAGTTCTGCCAC 840
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TGCAAAACTGTATTACTCTTGTCATTACATTGGGCATGCTTGAGATGTCATTGTGGTATT 900
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TTGAGTATGCTGAGTTCAACGAGACTGGTGTTCGACCAAAGGGCATCACATTTTGGGCTG 960
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TAACATTTGGGACTGTTAAAAGAACAGTAGCCCGTGTTATTATTCTCATTGTCTCAATGG 1020
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      GATATGGAGTTGTCAGGCCTAGTTTGGGTGGTCTCACATCAAAGGTGGTTATGCTTGGAG 1080
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      GAACATTCTTTTTAGCTACGGAAATCCTTGAATTGGTAGAAAATCTTGGTGCCGTAAATG 1140
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      ATCTATCTGGAAAAGCTCGATTGTTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCAT 1200
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TCGTTGTTTGGATTTTTATTTCGCTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGT 1260
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      CAATGGCCAAACTTGACATTTACAGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGG 1320
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      TGTCTATTGGCTGGATTGGCTATGAGATTTACTTCAAATCAACAGATGTATTCAATGAAC 1380
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      GATGGCAGTATGCATGGATAATTCCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTT 1440
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      GTGTCATTTCATACCTGTGGGCGCCGTCACAGAACTCAATGAGGTTTACCTATGATGCAA 1500
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      GCGAAAACTTTGATCGAGAGGACAGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCA 1560
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      AGAACGGGTGGAGTTTATCTTCTTCACCAGACACCAAAGCAACAAAGAACGTTACAGTTA 1620
consensus_11671#1      ------------------------------------------------------------
                                                                                   

consensus_11671#0      CATCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTC 1680
consensus_11671#1      --------------------------------------------------------TTTC 4
                                                                               ****

consensus_11671#0      ATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACACTTTACT 1740
consensus_11671#1      ATGAGGGAGAGAAGATACAGCCACATTCAAATTTTGGTATGCAGCAGATCACNCTTTACN 64
                       **************************************************** ****** 

consensus_11671#0      AATTCTAGTTGTCGGGATACGCCAAGGGAATTATGGAAGTAATCTTTATTGAATTCATTT 1800
consensus_11671#1      AANTCNAGTTGTCGGGATACCCCAAGGGAATTATGGAAGTAANCTTTATTGAANTCATTT 124
                       ** ** ************** ********************* ********** ******

consensus_11671#0      CCTCCATATAGTAGTTTTTCACACGGTGCGCCACGTTATAGGCATCACTGTATGGATGAT 1860
consensus_11671#1      CCCCCATANAGTAGTTTTTCACACGGTGCNCCNCGTTANAGGCATCACTGTATGGATGAT 184
                       ** ***** ******************** ** ***** *********************

consensus_11671#0      GATATATATGATAGGAACAATTTATCTATGCCATCCAGAGGATGTGTGGTGTATAATGTG 1920
consensus_11671#1      GATATATATGATAGGAACAATTTATCTATGCCATCCANAGGATNTGTGGTGTATAATGTG 244
                       ************************************* ***** ****************

consensus_11671#0      TATTTTTGTAGATTTGATGCTGCTTCTGGTTTATGTGAACTCCAAGATTGTCATGTACGG 1980
consensus_11671#1      TATTTTTGTANATTTGATGCTGCTTCTGGTTTNTGTGAACNCCNANATTGTCNTGTA--- 301
                       ********** ********************* ******* ** * ****** ****   

consensus_11671#0      TAGAAGAGAATGTTGTTTTTCTGTGTTTTATTTATTTAAAAAAAAAAAAAAAAAAAAAAA 2040
consensus_11671#1      -AAAAAAAAA---------------------------AAAAAAAAAAAAAAAAAA----- 328
                        * ** * **                           ******************     

consensus_11671#0      A 2041
consensus_11671#1      -
                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)