cluster # 11681

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Oryza sativa
cluster # 11681 cluster # 11681 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11681#0 length = 1481 sequences # 9
consensusID : consensus_11681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1481
fasta sequence
                              [TTCTCGCTTCACGCTTCTCTCCTCCTCTCCGCGGCGGCGAGAGCAAGGGCGAGGCGGGCGGCGAGGTGAGAAGGTGGGGGTTTGGGTTGGTATGGCGACGGGAGGAGGAGGAGGAGGGGGAGGGATGGGGGGAGGAGGTGTCGGAGGAGGAGCGGGGGCGGCGGGGGTGGGGGTGGGAGGGAGGATGCCGACGTGGAGGGAGCGGGAGAACAACAAGCGGAGGGAGCGGCGGCGTCGCGCGATCGCCGCCAAGATCTTCGCCGGCCTCCGCGCCCACGGCGGCTACAAGCTCCCCAAGCACTGCGACAACAACGAGGTCCTCAAGGCCCTCTGCAACGAGGCCGGCTGGGTCGTCGAGCCCGACGGCACCACCTACCGCAAGGGATACAAGCCTCCTGAACGCATGGAAGTGATTGGGTGCTCCGTATCACCAAGCCCGTGTTCCTCGTATCAACCAAGCCCGCGG-GCATCATACAATGCGAGTCCTACTTCCTCCTCATTCCC-TAGCGGCGCATCCTCCCCCTTCCTTCCTCACCCTAACAACATGGCCAATGGTGTTGATGGTAATCCTATCCTCCCATGGCTTAAAACACTGTCCAATTCTCCATCATCAAAGAAACATCCACAGCTTCCCCCACTATTGATTCACGGTGGTTCCATTA-GTG-CCCCTGTAACTCCTCCATTGAGTTCACCA-ACT-GCTCGCACTCCTCGCATGAAGACAGATTGGGATGAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGTGAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGGTATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGTGTCATCAAATCCA-TTTAGTGTCTTTAAAGACGCGATTCTGGTGGGCAACAATTCATC-GAGGATGTGCACGCCAGGGCAAAGCGGCACATGCTCCCCTGCGATTCCTGGCATGGCACCACACCCAGATATTCATATGATGGATGCGGTTTCTGATGAGTTTGCATTT-GGAAGCAGCACAAACGGTGGCCATC-AGGCGGCTGGTC-TGGT-GAGGGCGTGGGAAGGCG-AGAGGA-TCCAC-GAGGACTCGGGATCGGACGACCTAGAGCTGACTCTTGGAAGCTCTAGGACAAGAGCTGCTGCTTAACAAAAAAAAAAAAAACTAACCTGGAGGCATTCTTGTCTGTAGCTTATTTGTTCGTGTTCATTAGTTTCTGAAAGAGAGACCCATCGTGTGGTTCCTTCAGATAGCTTCAGTTGTGATGATAATTGTGTTATTTATGTGAGACACGAGCTAGAGAGAAAGGGGGCTTTAATTCGGCCAAACCCAGCTGTGATATGGTAATCTCAGCTGGCTGTAATTTTAAAGCCCCCCCTTTGTTGTGACAAATGTAAA-TGATGTGAGAAATCATGCCAAATTCATGGAGCGAAAAAAAAAA]

[+] EMBL AK067471             [TTCTCGCTTCACGCTTCTCTCCTCCTCTCCGCGGCGGCGAGAGCAAGGGCGAGGCGGGCGGCGAGGTGAGAAGGTGGGGGTTTGGGTTGGTATGGCGACGGGAGGAGGAGGAGGAGGGGGAGGGATGGGGGGAGGAGGTGTCGGAGGAGGAGCGGGGGCGGCGGGGGTGGGGGTGGGAGGGAGGATGCCGACGTGGAGGGAGCGGGAGAACAACAAGCGGAGGGAGCGGCGGCGTCGCGCGATCGCCGCCAAGATCTTCGCCGGCCTCCGCGCCCACGGCGGCTACAAGCTCCCCAAGCACTGCGACAACAACGAGGTCCTCAAGGCCCTCTGCAACGAGGCCGGCTGGGTCGTCGAGCCCGACGGCACCACCTACCGCAAGGGATACAAGCCTCCTGAACGCATGGAAGTGATTGGGTGCTCCGTATCACCAAGCCCGTGTTCCTCGTATCAACCAAGCCCGCGG GCATCATACAATGCGAGTCCTACTTCCTCCTCATTCCC TAGCGGCGCATCCTCCCCCTTCCTTCCTCACCCTAACAACATGGCCAATGGTGTTGATGGTAATCCTATCCTCCCATGGCTTAAAACACTGTCCAATTCTCCATCATCAAAGAAACATCCACAGCTTCCCCCACTATTGATTCACGGTGGTTCCATTA GTG CCCCTGTAACTCCTCCATTGAGTTCACCA ACT GCTCGCACTCCTCGCATGAAGACAGATTGGGATGAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGTGAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGGTATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGTGTCATCAAATCCA TTTAGTGTCTTTAAAGACGCGATTCTGGTGGGCAACAATTCATC GAGGATGTGCACGCCAGGGCAAAGCGGCACATGCTCCCCTGCGATTCCTGGCATGGCACCACACCCAGATATTCATATGATGGATGCGGTTTCTGATGAGTTTGCATTT GGAAGCAGCACAAACGGTGGCCATC AGGCGGCTGGTC TGGT GAGGGCGTGGGAAGGCG AGAGGA TCCAC GAGGACTCGGGATCGGACGACCTAGAGCTGACTCTTGGAAGCTCTAGGACAAG                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA765618             [                                                                                                                                                                                                                      AAGGGGAGGGAGCGGCGGCGTCGCGCGATCGCCGCCAAGATCTTCGCCGGCCTCCGCGCCCACGGCGGCTACAAGCTCCCCAAGCACTGCGACAACAACGAGGTCCTCAAGGCCCTCTGCAACGAGGCCGGCTGGGTCGTCGAGCCCGACGGCACCACCTACCGCAAGGGATACAAGCCTCCTGAACGCATGGAAGTGATTGGGTGCTCCGTATCACCAAGCCCGTGTTCCTCGTATCAACCAAGCCCGCGG GCATCATACAATGCGAGTCCTACTTCCTCCTCATTCCC TAGCGGCGCATCCTCCCCCTTCCTTCCTCACCCTAACAACATGGCCAATGGTGTTGATGGTAATCCTATCCTCCCATGGCTTAAAACACTGTCCAATTCTCCATCATCAAAGAAACATCCACAGCTTCCCCCACTATTGATTCACGGTGGTTCCATTA GTG CCCCTGTAACTCCTCCATTGAGTTCACCA ACT GCTCGCACTCCTCGCATGAAGACAGATTGGGATGAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGTGAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGGTATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGNGTCATCAAATCCATTTTAGTGTCTTTAAAGACGCGATTCCGATGGGCAACAATTCATCGGAGGATGTGCACGCCAGGGCAAAGCGGCACATGCTNCCCTGCGATTNCTGGCATGGCACCACACCCAGATATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS4670A             [                                                                                                                                                                                                                               GAGCGGCGGCGTCGCGCGATCG CGCCAAGATCTTCGCCGGCCTCCGNGCCCACGG GGCTACAAGCTCCCCAAGCACTGCGACAACAACGAGGTCCTCAAGGCCCTCTGCAACGAGGCCGGCTGGGTCGTCGAGCCCGACGGCACCACCTACCGCAAGGGATACAAGCCTCCTGAACGCATGGAAGTGATTGGGTGCTCCGTATCACCAAGCCCGTGTTCCTCGTATCAACCAAGCCCGNGGNGCATCATACAATGNGAGTCCTACTTCCTCCTCATTCCC T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU100774             [                                                                                                                                                                                                                                                                                                                       ACGAGGTCCTCAAGGCCCTCTGCAACGAGGCCGGCTGGGTCGTCGAGCCCGACGGCACCACCTACCGCAA GGATACAAGCCTCCTGAACGCATGGAAGTGATTGGGTGCTCCGTATCACCAAGCCCGTGTTCCTCGTATCAACCAAGCCCGCGG GCATCATACAATGCGAGTCCTACTTCCTCCTCATTCCC TAGCGGCGCATCCTCCCCCTTCCTTCCTCACCCTAACAACATGGCCAATGGTGTTGATGGTAATCCTATCCTCCCATGGCTTAAAACACTGTCCAATTCTCCATCATCAAAGAAACATCCACAGCTTCCCCCACTATTGATTCACGGTGGTTCCATTA GTG CCCCTGTAACTCCTCCATTGAGTTCACCA ACT GCTCGCACTCCTCGCATGAAGACAGATTGGGATGAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGTGAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGGTATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGTGTCATCAAATCCA TTTAGTGTCTTTAAAGACGCGATTCTGGTGGGCAACAATTCATC GAGGATGTGCACGCCAAGGCAAAGCGGGACATGCTCCCCTGCGATTCCTGGCATGGCACCAAAACCAGATATTCATATGATGGATGCGGTTTCTGATGAGTTTGCATTTGGGAAGCAGCACAAACGGTGGCCATCAAGGGGGCTGGTCTTGNTAAAGGCCTTGGGAAGGCGAAAAAGATTCCACGGAGGAatt                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU100773             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ttaATTCCCTTAGCGGCGNATCTTCCCCTTTCTTNCTTCCCCTTAACAACATGGCCAATGGTGTTGATGGTAATCCTATCCTCCCATGGCTTAAAACACTGTCCAATTCTCCATCATCAAAGAAACATCCACAGCTTCCCCCACTATTGATTCACGGTGGTTCCATTA GTG CCCCTGTAACTCCTCCATTGAGTTCACCA ACT GCTCGCACTCCTCGCATGAAGACAGATTGGGATGAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGTGAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGGTATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGTGTCATCAAATCCA TTTAGTGTCTTTAAAGACGCGATTCTGGTGGGCAACAATTCATC GAGGATGTGCACGCCAGGGCAAAGCGGCACATGCTCCCCTGCGATTCCTGGCATGGCACCACACCCAGATATTCATATGATGGATGCGGTTTCTGATGAGTTTGCATTT GGAAGCAGCACAAACGGTGGCCATC AGGCGGCTGGTC TGGT GAGGGCGTGGGAAGGCG AGAGGA TCCAC GAGGACTCGGGATCGGACGACCTAGAGCTGACTCTTGGAAGCTCTAGGACAAGAGCTGCTGCTTAACAAAAAAAA                                                                                                                                                                                                                                                                                            ]
[+] EMBL BQ907934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCATTAGGTGCCCCCTGTAACTCCTCCATNGAGTTCACCAGACTGGCTCGCACTCCTCGCATGAAGACAGATTGGGATGAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGTGAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGGTATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGTGTCATCAAATCCA TTTAGTGTCTTTAAAGACGCGATTCCGGTGGGCAACAATTCATC GAGGATGTGCACGCCAGGGCAAAGCGGCACATGCTCCCCTGCGATTCCTGGCATGGCACCACACCCAGATATTCATATGATGGATGCGGTTTCTGATGAGTTTGCATTT GGAAGCAGCACAAACGGTGGCCATC AGGCGGCTGGTC TGGT GAGGGCGTGGGAAGGCG AGAGGA TCCAC GAGGACTCGGGATCGGACGACCTAGAGCTGACTCTTGGAAGCTCTA GACAAGAGCTGCTGCTTAACAAAAA                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU091561             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGTGAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGGTATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGTGTCATCAAATCCA TTTAGTGTCTTTAAAGACGCGATTCTGGTGGGCAACAATTCATC GAGGATGTGCACGCCAGGGCAAAGCGGCACATGCTCCCCTGCGATTCCTGGCATGGCACCACACCCAGATATTCATATGATGGATGCGGTTTCTGATGAGTTTGCATTT GGAAGCAGCACAAACGGTGGCCATC AGGCGGCTGGTC TGGT GAGGGCGTGGGAAGGCG AGAGGA TCCAC GAGGACTCGGGATCGGACGACCTAGAGCTGACTCTTGGAAGCTCTAGGACAAGAGCTGCTGCTTAACAAAAAAAA                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM420927             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATTCATATGATGGATGCGGTTTCTGATGAGTTTGCATTT GGAAGCAGCACAAACGGTGGCCATC AGGCGGCTGGTC TGGT GAGGGCGTGGGAAGGCG AGAGGA TCCAC GAGGACTCGGGATCGGACGACCTAGAGCTGACTCTTGGAAGCTCTAGGACAAGAGCTGCTGCTTAAC    NAAAAAAAAACTAACCTGGAGGCATTCTTGTCTGTAGCTTATTTGTTCGTGTTCATTAGTTTCTGAAAGAGAGACCCATCGTGTGGTTCCTTCAGATAGCTTCAGTTGTGATGATAATTGTGTTATTTATGTGAGACACGAGCTAGAGAGAAAGGGGGCTTTAATTCGGCCAAACCCAGCTGTGATATGGTAATCTCAGCTGGCTGTAATTTTAAAGCCCCCCCTTTGTTGTGACAAATGTAAATTGATGTGAGAAATCATGCCAAATTCATGGAGCGAAAAAAAAAA]
[+] EMBL AU225350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gccgctGGCGGCTGGTC TGGT GAGGGCGTGGGAAGGCG AGAGGA TCCAC GAGGACTCGGGATCGGACGACCTAGAGCTGACTCTTGGAAGCTCTAGGACAAGAGCTGCTGCTTAACAAAAAAAAAAAAAACTAACCTGGAGGCATTCTTGTCTGTAGCTTATTTGTTCGTGTTCATTAGTTTCTGAAAGAGAGACCAATCGTGTGGTTCCTTCAGATAGCTTCAGTTGTGATGATAATTGTGTTATTTATGTGATGCACGAGCTAGAGAGAAAGGGGGCTTTAATTCGGCCAAACCCAGCTGTGATATGGTAATCTCAGCTGGCTGTAATTTTAAAGCCCCCCCTTTGTTGTGACAAATGTAAA TGATGTGAGAgcgg                             ]




>consensus_11681#0
TTCTCGCTTCACGCTTCTCTCCTCCTCTCCGCGGCGGCGAGAGCAAGGGCGAGGCGGGCG
GCGAGGTGAGAAGGTGGGGGTTTGGGTTGGTATGGCGACGGGAGGAGGAGGAGGAGGGGG
AGGGATGGGGGGAGGAGGTGTCGGAGGAGGAGCGGGGGCGGCGGGGGTGGGGGTGGGAGG
GAGGATGCCGACGTGGAGGGAGCGGGAGAACAACAAGCGGAGGGAGCGGCGGCGTCGCGC
GATCGCCGCCAAGATCTTCGCCGGCCTCCGCGCCCACGGCGGCTACAAGCTCCCCAAGCA
CTGCGACAACAACGAGGTCCTCAAGGCCCTCTGCAACGAGGCCGGCTGGGTCGTCGAGCC
CGACGGCACCACCTACCGCAAGGGATACAAGCCTCCTGAACGCATGGAAGTGATTGGGTG
CTCCGTATCACCAAGCCCGTGTTCCTCGTATCAACCAAGCCCGCGGGCATCATACAATGC
GAGTCCTACTTCCTCCTCATTCCCTAGCGGCGCATCCTCCCCCTTCCTTCCTCACCCTAA
CAACATGGCCAATGGTGTTGATGGTAATCCTATCCTCCCATGGCTTAAAACACTGTCCAA
TTCTCCATCATCAAAGAAACATCCACAGCTTCCCCCACTATTGATTCACGGTGGTTCCAT
TAGTGCCCCTGTAACTCCTCCATTGAGTTCACCAACTGCTCGCACTCCTCGCATGAAGAC
AGATTGGGATGAATCAAATGTCCAGCCTACGTGGACTGGTTCGAACAGTCCCTGCGTGGT
GAACTCCACGCCGCCCAGCCCCGGACGCACAATGCTTCCGGACCCAGCATGGTTAGCTGG
TATCCAAATATCATCAACAAGTCCATCATCACCGACATTTAGTCTTGTGTCATCAAATCC
ATTTAGTGTCTTTAAAGACGCGATTCTGGTGGGCAACAATTCATCGAGGATGTGCACGCC
AGGGCAAAGCGGCACATGCTCCCCTGCGATTCCTGGCATGGCACCACACCCAGATATTCA
TATGATGGATGCGGTTTCTGATGAGTTTGCATTTGGAAGCAGCACAAACGGTGGCCATCA
GGCGGCTGGTCTGGTGAGGGCGTGGGAAGGCGAGAGGATCCACGAGGACTCGGGATCGGA
CGACCTAGAGCTGACTCTTGGAAGCTCTAGGACAAGAGCTGCTGCTTAACAAAAAAAAAA
AAAACTAACCTGGAGGCATTCTTGTCTGTAGCTTATTTGTTCGTGTTCATTAGTTTCTGA
AAGAGAGACCCATCGTGTGGTTCCTTCAGATAGCTTCAGTTGTGATGATAATTGTGTTAT
TTATGTGAGACACGAGCTAGAGAGAAAGGGGGCTTTAATTCGGCCAAACCCAGCTGTGAT
ATGGTAATCTCAGCTGGCTGTAATTTTAAAGCCCCCCCTTTGTTGTGACAAATGTAAATG
ATGTGAGAAATCATGCCAAATTCATGGAGCGAAAAAAAAAA
clustalw multiple alignements is not computed in this case