cluster # 11686

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Oryza sativa
cluster # 11686 cluster # 11686 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11686#0 length = 1308 sequences # 9
consensusID : consensus_11686#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1308
fasta sequence
                              [ACTTGGCGAAAAAAAAAAAACAGCTCTCGCAAAATCTCGCTGCCGCTGCCGCTCGCGAGCAAGCTCTACCGCCACTGCCGCGTGGCTGTTCTTGCTTCTCCGGAGGGGAAGGAACCCCGCGGGGAGGGAGCCTTCCACCCTTCGCAAAAGCCACGCGCCACCAAATCCTCCTTTTCTCCTCATCTTCCCTCCATCCCTTCCTCCCTCCGGCCGCGCGTCGCTTTCGCCGCGACCGAATCGGTGGGGTCGTGTGGGGGGAGGAGAGGGGCGCCATAAAGGCGGCTGGGGTCGGCGATGATGAGCGGCGTTGGAGGAGGCAGATCGGGCGGGAGGGACGCGGAGGGCGAGTGGGAGGTCCGGCCTGGCGGGATGCTGGTGCAGCGCAGGGACGGCGACACGGGTCCGGCCGTCAGGCTCAGGGTCTCCCACGGCGCCTCCTTCCGCGACGTCGCCGTGCCGGCGCACTCCACCTTCGGTGAATTGAAGGGGGTCCTTACCCAGGCAACTGGCGTAGAGCCTGAAAGGCAGAGGCTCTTCTTCCGTGGGAAGGAGAAGAGTGACAATGAGTTCCTGCATACAGCTGGGGTCAAGGATGGAGCAAAACTTCTTCTACTTGAGAAGCCTGCCCCTGCCAATGTAGAGCAGAGGGCCGAGCCAGTAATTATGGATGAGAGCATGATGAAGGCTTGTGAGGCTGTTGGCCGTGTAAGAGCTGAAGTTGACAGACTCTCTGCCAAGGTATGTGATTTGGAGAAGAGTGTGTTTGCAGGGAGAAAGATTGAGGATAAAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGATGGCATAGAGGCA-GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATG-CAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]

[+] EMBL AK070208             [ACTTGGCGAAAAAAAAAAAACAGCTCTCGCAAAATCTCGCTGCCGCTGCCGCTCGCGAGCAAGCTCTACCGCCACTGCCGCGTGGCTGTTCTTGCTTCTCCGGAGGGGAAGGAACCCCGCGGGGAGGGAGCCTTCCACCCTTCGCAAAAGCCACGCGCCACCAAATCCTCCTTTTCTCCTCATCTTCCCTCCATCCCTTCCTCCCTCCGGCCGCGCGTCGCTTTCGCCGCGACCGAATCGGTGGGGTCGTGTGGGGGGAGGAGAGGGGCGCCATAAAGGCGGCTGGGGTCGGCGATGATGAGCGGCGTTGGAGGAGGCAGATCGGGCGGGAGGGACGCGGAGGGCGAGTGGGAGGTCCGGCCTGGCGGGATGCTGGTGCAGCGCAGGGACGGCGACACGGGTCCGGCCGTCAGGCTCAGGGTCTCCCACGGCGCCTCCTTCCGCGACGTCGCCGTGCCGGCGCACTCCACCTTCGGTGAATTGAAGGGGGTCCTTACCCAGGCAACTGGCGTAGAGCCTGAAAGGCAGAGGCTCTTCTTCCGTGGGAAGGAGAAGAGTGACAATGAGTTCCTGCATACAGCTGGGGTCAAGGATGGAGCAAAACTTCTTCTACTTGAGAAGCCTGCCCCTGCCAATGTAGAGCAGAGGGCCGAGCCAGTAATTATGGATGAGAGCATGATGAAGGCTTGTGAGGCTGTTGGCCGTGTAAGAGCTGAAGTTGACAGACTCTCTGCCAAGGTATGTGATTTGGAGAAGAGTGTGTTTGCAGGGAGAAAGATTGAGGATAAAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGATGGCATAGAGGCA GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCC                                                                                                                                                                        ]
[-] EMBL CF305108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGTGATTTGGAGAAGAGTGTGTTTGCAGGGAGAAAGATTGAGGATAAAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGATGGCATAGAGGCA GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATG CAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[-] EMBL CF303624             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGATTTGGAGAAGAGTGTGTTTGCAGGGAGAAAGATTGAGGATAAAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGATGGCATAGAGGCA GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATG CAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[-] EMBL CF303384             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTGTTTGCAGGGAGAAAGATTGAGGATAAAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGATGGCATAGAGGCA GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATG CAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[-] EMBL CF303660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGATTGAGGATAAAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGATGGCATAGAGGCA GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATAAG CAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[+] EMBL BQ906382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGATGGCATAGAGGCANGAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGAATAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATGCCAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCAaaaaaaaaa                                    ]
[-] EMBL CF303041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCATAGAGGCA GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATG CAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[-] EMBL CF304726             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCA GAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCAGCAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATG CAAGAAGTTTGACGCCTATTGCTAACACTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTGTCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[-] EMBL CF305164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAAGGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAAAACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTGAATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGACTAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTCCTTTCACAGGCACACGATTGTTGTGTATATG CAAGAAGTTTGACGCCTATTGCTAACTCTGCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATCGCTTCGGTGATCTGTTAGGCTGTCACATTTCAGTTTAAAAAGAAAAAAAAAAAAACTCGAGACTAGTTCT]




>consensus_11686#0
ACTTGGCGAAAAAAAAAAAACAGCTCTCGCAAAATCTCGCTGCCGCTGCCGCTCGCGAGC
AAGCTCTACCGCCACTGCCGCGTGGCTGTTCTTGCTTCTCCGGAGGGGAAGGAACCCCGC
GGGGAGGGAGCCTTCCACCCTTCGCAAAAGCCACGCGCCACCAAATCCTCCTTTTCTCCT
CATCTTCCCTCCATCCCTTCCTCCCTCCGGCCGCGCGTCGCTTTCGCCGCGACCGAATCG
GTGGGGTCGTGTGGGGGGAGGAGAGGGGCGCCATAAAGGCGGCTGGGGTCGGCGATGATG
AGCGGCGTTGGAGGAGGCAGATCGGGCGGGAGGGACGCGGAGGGCGAGTGGGAGGTCCGG
CCTGGCGGGATGCTGGTGCAGCGCAGGGACGGCGACACGGGTCCGGCCGTCAGGCTCAGG
GTCTCCCACGGCGCCTCCTTCCGCGACGTCGCCGTGCCGGCGCACTCCACCTTCGGTGAA
TTGAAGGGGGTCCTTACCCAGGCAACTGGCGTAGAGCCTGAAAGGCAGAGGCTCTTCTTC
CGTGGGAAGGAGAAGAGTGACAATGAGTTCCTGCATACAGCTGGGGTCAAGGATGGAGCA
AAACTTCTTCTACTTGAGAAGCCTGCCCCTGCCAATGTAGAGCAGAGGGCCGAGCCAGTA
ATTATGGATGAGAGCATGATGAAGGCTTGTGAGGCTGTTGGCCGTGTAAGAGCTGAAGTT
GACAGACTCTCTGCCAAGGTATGTGATTTGGAGAAGAGTGTGTTTGCAGGGAGAAAGATT
GAGGATAAAGATTTTGTTGTCTTGACGGAGCTTCTTATGATGGAGCTGCTGAAACTTGAT
GGCATAGAGGCAGAGGGAGAAGCAAGGGCACAAAGGAAGGCTGAGGTACGCCGTGTCCAA
GGTCTTGTGGAGACGTTGGATAAGCTGAAGGCAAGAAATGCCAATCCCTTCAGCGATCAA
AACAAATCTGTTTCAGTGACAACGCAGTGGGAGACGTTCGACAATGGCATGGGCAGCTTG
AATGCACCCCCACCACGGGTTTCTTCCACACAAATAAACACCGACTGGGAGCAATTCGAC
TAGCCTCGGATTGCGTTTTCTCATTGTATCGTTAACTTGTGAGATCAGGTATCTAAATTC
CTTTCACAGGCACACGATTGTTGTGTATATGCAAGAAGTTTGACGCCTATTGCTAACACT
GCCTGTGCAATGTTATCGAATGATGCAAGTGATGAATTGCTTCGGTGATCTGTTAGGCTG
TCATATTTCAGTTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT
clustalw multiple alignements is not computed in this case