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Oryza sativa
cluster # 11688 cluster # 11688       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11688#0 length = 1902 sequences # 8  
consensus_11688#1 length = 114 sequences # 1  

consensusID : consensus_11688#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1902
fasta sequence
                              [AGGCGGCGGAGAGGCAACGGAGGCGTGGTTGAGGGATTCCGGCGTGGAGCGGCGCCGGGAGAGGGGAGAA-GCGGCGGCGGCGGCGGCGGCGGCATGGCCATCGAGTGCCTCGTGCTAGGGGCGGGGCAGGAGGTGGGGAAGAGCTGCGTGGTGGTCACCTTCGGCGGCGGGAAGCGCGTCATGTTCGACTGCGGCATGCACATGGGCCACCGCGACAGCCGCCGCTACCCGGACTTCGACCGCCTCCTCGCCGACGGCG-CCGCCGACTACACCGCCGCCATCTCCTGCGTCGNCATCACCCACTTCCATTTGGATCATATCGGAGCACTGCCGTACTTCACCGAGGTCTGCGGTTACCACGGTCCAGTTTACATGACGTACCCGACAAAGGCTTTAGCTCCATTGATGCTGGAAGACTATCGGAAAGTAATGGTAGATCATAGAGGAGAGGAAGAGCAATATAGCTATGAAGACATCCT-ACGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGACCTTTCGATCCGTGCCTATTATGCTGGACATGTTCTAGGGGCTGCAATGATATATGCAAAAGTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTTGGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCTAAAACTGTGCGTGACTCGAAGCATGCCCGAGAGAGGGAGTTCTTAAAAGCAGTCCATAAGTGTGTTTCTGGAGGTGGTAAAGTTCTAATTCCAGCATTTGCTCTTGGAAGAGCACAGGAGCTATGCATACTACTGGATGACTATTGGGAAAGGATGAACCTGAAGATTCCTATTTATTTCTCAGCTGGTTTAACCATTCAAGCCAACATGTACTACAAAATGCTTATTGGATGGACTAGCCAAAAGATCAAGAACAGCTACACAGTTCATAACCCATTTGACTTCAAGCATGTTTGCCACTTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATGATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTGGTTACACTTCCTGGATATTGTGTTGCTGGAACCATTGGCCATAAGTTGATGTCTGGAAAACCTACCAGGATTGACATAGACAAGGACACCCATATTGATGTCAGATGTCAGATCCATCAACTGTCATTCAGTCCTCATACAGACTCAAAGGGGATCATGGATCTTACTGAATTTCTTTCTCCCAGTCATGTAATTTTAGTTCATGGCGAAAAACCTCAGATGGCTTTCTTGAAGGAGCGGATCGAATCCGAGTTGGGGATGCAATGCTGTTACCCAGCTAACAACGAGACCGTCTTTATTCCGACATCCCAGAACTTGAAAATAAACGCCACGGAGAAGTTCATTGTGAGCTTTTGCATGGATGAAACTGAAAATGATCCGCAGAAGCAGAACCTGAATTTTGGTGGGGACATGCCACAAGGCTGCAGGACTGAAGGAGTAGCTGAGGGCGTTCTTCTGATGGAGAAGTCCAAGACTCCGAAGATTTTGCGCGAGGAC---CTGCTTCACTCGCTGGGCATGGAAACGCATTTTGTCCATTTTGAACCACTGCATCCGTCCAGCATTGAGGTAAAACATACTGGTGAGTCCGCGGTGCAGCAGAGCAGTTTAGAACATTTAGACTGCGAGTGAAATGAATGAACAATTCTTCTTTTCAACTACTCTCGACTTTGGAGACTTTTGAGAGGTATAGCCAGAAGGGGAAGAGTTGTGTAGTTAGACTGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTTATTT]

[+] EMBL CF324482             [AGGCGGCGGAGAGGCAACGGAGGCGTGGTTGAGGGATTCCGGCGTGGAGCGGCGCCGGGAGAGGGGAGAAGGCGGCGGCGGCGGCGGCGGCGGCATGGCCATCGAGTGCCTCGTGCTAGGGGCGGGGCAGGAGGTGGGGAAGAGCTGCGTGGTGGTCACCTTCGGCGGCGGGAAGCGCGTCATGTTCGACTGCGGCATGCACATGGGCCACCGCGACAGCCGCCGCTACCCGGACTTCGACCGCCTCCTCGCCGACGGCG CCGCCGACTACACCGCCGCCATCTCCTGCGTCGNCATCACCCACTTCCATTTGGATCATATCGGAGCACTGCCGTACTTCACCGAGGTCTGCGGTTACCACGGTCCAGTTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK101306             [               AACGGAGGCGTGGTTGAGGGATTCCGGCGTGGAGCGGCGCCGGGAGAGGGGAGAA GCGGCGGCGGCGGCGGCGGCGGCATGGCCATCGAGTGCCTCGTGCTAGGGGCGGGGCAGGAGGTGGGGAAGAGCTGCGTGGTGGTCACCTTCGGCGGCGGGAAGCGCGTCATGTTCGACTGCGGCATGCACATGGGCCACCGCGACAGCCGCCGCTACCCGGACTTCGACCGCCTCCTCGCCGACGGCGCCCGCCGACTACACCGCCGCCATCTCCTGCGTCGTCATCACCCACTTCCATTTGGATCATATCGGAGCACTGCCGTACTTCACCGAGGTCTGCGGTTACCACGGTCCAGTTTACATGACGTACCCGACAAAGGCTTTAGCTCCATTGATGCTGGAAGACTATCGGAAAGTAATGGTAGATCATAGAGGAGAGGAAGAGCAATATAGCTATGAAGACATCCT ACGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGACCTTTCGATCCGTGCCTATTATGCTGGACATGTTCTAGGGGCTGCAATGATATATGCAAAAGTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTTGGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCTAAAACTGTGCGTGACTCGAAGCATGCCCGAGAGAGGGAGTTCTTAAAAGCAGTCCATAAGTGTGTTTCTGGAGGTGGTAAAGTTCTAATTCCAGCATTTGCTCTTGGAAGAGCACAGGAGCTATGCATACTACTGGATGACTATTGGGAAAGGATGAACCTGAAGATTCCTATTTATTTCTCAGCTGGTTTAACCATTCAAGCCAACATGTACTACAAAATGCTTATTGGATGGACTAGCCAAAAGATCAAGAACAGCTACACAGTTCATAACCCATTTGACTTCAAGCATGTTTGCCACTTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATGATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTGGTTACACTTCCTGGATATTGTGTTGCTGGAACCATTGGCCATAAGTTGATGTCTGGAAAACCTACCAGGATTGACATAGACAAGGACACCCATATTGATGTCAGATGTCAGATCCATCAACTGTCATTCAGTCCTCATACAGACTCAAAGGGGATCATGGATCTTACTGAATTTCTTTCTCCCAGTCATGTAATTCTAGTTCATGGCGAAAAACCTCAGATGGCTTTCTTGAAGGAGCGGATCGAATCCGAGTTGGGGATGCAATGCTGTTACCCAGCTAACAACGAGACCGTCTCTATTCCGACATCCCAGAACTTGAAAATAAACGCCACGGAGAAGTTCATTGTGAGCTTCTGCATGGATGAAACTGAAAATGATCCGCAGAAGCAGAACCTGAATTTTGGTGGCGACATGCCACAAGGCTGCAGGACTGAAGGAGTAGCTGAGGGCGTTCTTCTGATGGAGAAGTCCAAGACTCCGAAGATTTTGCGCGAGGAC   CTGCTTCACTCGCTGGGCATGGAAACGCATTTTGTCCATTTTGAACCACTGCATCCGTCCAGCATTGAGGTAAAACATACTGGTGAGTCCGCGGTGCAGCAGAGCAGTTTAGAACATTTAGACTGCGAGTGAAATGAATGAACAATTCTTCTTTTCAACTACTCTCGACTTTGGAGACTTTTGAGAGGTATAGCCAGAAGGGGAAGAGTTGTGTAGTTAGACTGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTTATT ]
[+] EMBL CF322430             [                                                                                                                                                                                                                                                                                                       CATCACCCACTTCCATTTGGATCATATCGGAGCACTGCCGTACTTCACCGAGGTCTGCGGTTACCACGGTCCAGTTTACATGACGTACCCGACAAAGGCTTTAGCTCCATTGATGCTGGAAGACTATCGGAAAGTAATGGTAGATCATAGAGGAGAGGAAGAGCAATATAGCTATGAAGACATCCT ACGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGACCTTTCGATCCGTGCCTATTATGCTGGACATGTTCTAGGGGCTGCAATGATATATGCAAAAGTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTTGGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCTAAAACTGTGCGTGACTCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB676287             [                                                                                                                                                                                                                                                                                                                                                                        ACGGTCCAGTTTACATGACGTACCCGACAAAGGCTTTAGCTCCATTGATGCTGGAAGACTATCGGAAAGTAATGGTAGATCATAGAGGAGAGGAAGAGCAATATAGCTATGAAGACATCCT ACGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGACCTTTCGATCCGTGCCTATTATGCTGGACAT       GGGCTGCAATGATATATGCAAAAGTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTTGGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCTAAAACTGTGCGTGACTCGAAGCATGCCCGAGAGAGGGAGTTCTTAAAAGCAGTCCATAAGTGTGTTTCTGGAGGTGGTAAAGTTCTAATTCCAGCATTTGCTCTTGGAAGAGCACAGGAGCTATGCATACTACTGGATGACTATTGGGAAAGGATGAACCTGAAGATTCCTATTTATTTCTCAGCTGGTTTAACCATTCAAGCCAACATGTACTACAAAATGCTTATTGGATGGACTAGCCAAAAGATCAAGAACAGCTACACAGTTCATAACCCATTTGACTTCAAGCATGTTTGCCACTTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATGATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTGGTTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB676245             [                                                                                                                                                                                                                                                                                                                                                                        ACGGTCCAGTTTACATGACGTACCCGACAAAGGCTTTAGCTCCATTGATGCTGGAAGACTATCGGAAAGTAATGGTAGATCATAGAGGAGAGGAAGAGCAATATAGCTATGAAGACATCCT ACGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGACCTTTCGATCCGTGCCTATTATGCTGGACAT       GGGCTGCAATGATATATGCAAAAGTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTTGGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCTAAAACTGTGCGTGACTCGAAGCATGCCCGAGAGAGGGAGTTCTTAAAAGCAGTCCATAAGTGTGTTTCTGGAGGTGGTAAAGTTCTAATTCCAGCATTTGCTCTTGGAAGAGCACAGGAGCTATGCATACTACTGGATGACTATTGGGAAAGGATGAACCTGAAGATTCCTATTTATTTCTCAGCTGGTTTAACCATTCAAGCCAACATGTACTACAAAATGCTTATTGGATGGACTAGCCAAAAGATCAAGAACAGCTACACAGTTCATAACCCATTTGACTTCAAGCATGTTTGCCACTTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATGATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTGGTTACACTTCCTGGATATTGTGTTGCTGGAACCATTGGCCATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB666441             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACATCCTCACGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGACCTTTCGATCCGTGCCTATTATGCTGGACATGTTCTAGGGGCTGCAATGATATATGCAAAAGTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTTGGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCTAAAACTGTGCGTGACTCGAAGCATGCCCGAGAGAGGGAGTTCTTAAAAGCAGTCCATAAGTGTGTTTCTGGAGGTGGTAAAGTTCTAATTCCAGCATTTGCTCTTGGAAGAGCACAGGAGCTATGCATACTACTGGATGACTATTGGGAAAGGATGAACCTGAAGATTCCTATTTATTTCTCAGCTGGTTTAACCATTCAAGCCAACATGTACTACAAAATGCTTATTGGATGGACTAGCCAAAAGATCAAGAACAGCTACACAGTTCATAACCCATTTGACTTCAAGCATGTTTGCCACTTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATGATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTGGTTACACTTCCTGGATATTGTGTTGCTGGAACCATTGGCCATAAGTTGATGTCTGGAAAACCTACCAGGATTGACATAGACAAGGACACCCATATTGATGTCAGATGTCAGATCCATCAACTGTCATTCAGTCCTCATACAGACTCAAAGGGGATCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB676246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCACTTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATGATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTGGTTACACTTCCTGGATATTGTGTTGCTGGAACCATTGGCCATAAGTTGATGTCTGGAAAACCTACCAGGATTGACATAGACAAGGACACCCATATTGATGTCAGATGTCAGATCCATCAACTGTCATTCAGTCCTCATACAGACTCAAAGGGGATCATGGATCTTACTGAATTTCTTTCTCCCAGTCATGTAATTTTAGTTCATGGGGAAAAACCTCAGATGGCTTTCTTGAAGGAGCGGATCGAATCCGAGTTGGGGATGCAATGCTGTTACCCAGCTAACAACGAGACCGTCTTTATTCCGACATCCCAGAACTTGAAAATAAACGCCACGGAGAAGTTCATTGTGAGCTTTTGCATGGATGAAACTGAAAATGATCCGCAGAAGCAGAACCTGAATTTTGGTGGGGACATGCCACAAGGCTGCAGGACTGAAGGAGTAGCTGAGGGCGTTCTTCTGATGGAGAAGTCCAAGACTCCGAAGATTTTGCGCGAGGACGAGCTGCTTCACTCGCTGGGCATGGAAACGCATTTTGTCCATTTTGAACCACTGCATCCGTCCAGCATTGAGGTAAAACATACTGGTGAGTCCGCGGTGCAGCAGAGCAGTTTAGAACATTTAGACTGCGAGTGAAATGAATGAACAATT                                                                                                                     ]
[-] EMBL CB666442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTCTGGAAAACCTACCAGGATTGACATAGACAAGGACACCCATATTGATGTCAGATGTCAGATCCATCAACTGTCATTCAGTCCTCATACAGACTCAAAGGGGATCATGGATCTTACTGAATTTCTTTTTCCCAGTCATGTAATTTTAGTTCATGGCGAAAAACCTCAGATGGCTTTTTTGAAGGAGCGGATCGAATCCGAGTTGGGGATGCAATGCTGTTACCCAGCTAACAACGAGACCGTTTTTATTCCGACATCCCAGAACTTGAAAATAAACGCCCCGGAGAAGTTCATTGTGAGCTTTTGCATGGATGAAACTGAAAATGATCCGCAGAAGCAGAACCTGAATTTTGGTGGGGACATCCCCCAAGGCTGCAGGACTGAAGGAGTAGCTGAGGGCGTTTTTTTGATGGAGAAGTCCAAGACTCCGAAGATTTTGCGCGAGGACGAGCTGCTTCCCTCGCTGGGCATGGAAACGCATTTTGTCCATTTTGAACCCCTGCATCCGTCCAGCATTGAGGTAAAACATACTGGTGAGTCCGCGGTGCAGCAGAGCAGTTTAGAACATTTAGACTGCGAGTGAAATGAATGAACAATTTTTTTTTTCAACTACTCTCGACTTTGGAGACTTTTGAGAGGTATAGCCAGAAGGGGAAGAGTTGTGTAGTTAGACTGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTTATTT]


>consensus_11688#0 AGGCGGCGGAGAGGCAACGGAGGCGTGGTTGAGGGATTCCGGCGTGGAGCGGCGCCGGGA GAGGGGAGAAGCGGCGGCGGCGGCGGCGGCGGCATGGCCATCGAGTGCCTCGTGCTAGGG GCGGGGCAGGAGGTGGGGAAGAGCTGCGTGGTGGTCACCTTCGGCGGCGGGAAGCGCGTC ATGTTCGACTGCGGCATGCACATGGGCCACCGCGACAGCCGCCGCTACCCGGACTTCGAC CGCCTCCTCGCCGACGGCGCCGCCGACTACACCGCCGCCATCTCCTGCGTCGNCATCACC CACTTCCATTTGGATCATATCGGAGCACTGCCGTACTTCACCGAGGTCTGCGGTTACCAC GGTCCAGTTTACATGACGTACCCGACAAAGGCTTTAGCTCCATTGATGCTGGAAGACTAT CGGAAAGTAATGGTAGATCATAGAGGAGAGGAAGAGCAATATAGCTATGAAGACATCCTA CGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGAC CTTTCGATCCGTGCCTATTATGCTGGACATGTTCTAGGGGCTGCAATGATATATGCAAAA GTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTT GGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCT AAAACTGTGCGTGACTCGAAGCATGCCCGAGAGAGGGAGTTCTTAAAAGCAGTCCATAAG TGTGTTTCTGGAGGTGGTAAAGTTCTAATTCCAGCATTTGCTCTTGGAAGAGCACAGGAG CTATGCATACTACTGGATGACTATTGGGAAAGGATGAACCTGAAGATTCCTATTTATTTC TCAGCTGGTTTAACCATTCAAGCCAACATGTACTACAAAATGCTTATTGGATGGACTAGC CAAAAGATCAAGAACAGCTACACAGTTCATAACCCATTTGACTTCAAGCATGTTTGCCAC TTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATG ATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTG GTTACACTTCCTGGATATTGTGTTGCTGGAACCATTGGCCATAAGTTGATGTCTGGAAAA CCTACCAGGATTGACATAGACAAGGACACCCATATTGATGTCAGATGTCAGATCCATCAA CTGTCATTCAGTCCTCATACAGACTCAAAGGGGATCATGGATCTTACTGAATTTCTTTCT CCCAGTCATGTAATTTTAGTTCATGGCGAAAAACCTCAGATGGCTTTCTTGAAGGAGCGG ATCGAATCCGAGTTGGGGATGCAATGCTGTTACCCAGCTAACAACGAGACCGTCTTTATT CCGACATCCCAGAACTTGAAAATAAACGCCACGGAGAAGTTCATTGTGAGCTTTTGCATG GATGAAACTGAAAATGATCCGCAGAAGCAGAACCTGAATTTTGGTGGGGACATGCCACAA GGCTGCAGGACTGAAGGAGTAGCTGAGGGCGTTCTTCTGATGGAGAAGTCCAAGACTCCG AAGATTTTGCGCGAGGACCTGCTTCACTCGCTGGGCATGGAAACGCATTTTGTCCATTTT GAACCACTGCATCCGTCCAGCATTGAGGTAAAACATACTGGTGAGTCCGCGGTGCAGCAG AGCAGTTTAGAACATTTAGACTGCGAGTGAAATGAATGAACAATTCTTCTTTTCAACTAC TCTCGACTTTGGAGACTTTTGAGAGGTATAGCCAGAAGGGGAAGAGTTGTGTAGTTAGAC TGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTTATTT



consensusID : consensus_11688#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 114
fasta sequence
                              [CAGGACGAGACAAGGGGAAGAGTTGTGTAGTTAGACTGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTTTATTTTGGTGGATTAAACCCTAAGAAAAAAAAAAANAAAA]

[+] EMBL CB096229             [CAGGACGAGACAAGGGGAAGAGTTGTGTAGTTAGACTGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTTTATTTTGGTGGATTAAACCCTAAGAAAAAAAAAAANAAAA]


>consensus_11688#1 CAGGACGAGACAAGGGGAAGAGTTGTGTAGTTAGACTGTTGGAAAAAAAGAACACTTTTC ATCCGTCAATTGTTTATTTTGGTGGATTAAACCCTAAGAAAAAAAAAAANAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11688#0      AGGCGGCGGAGAGGCAACGGAGGCGTGGTTGAGGGATTCCGGCGTGGAGCGGCGCCGGGA 60
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GAGGGGAGAAGCGGCGGCGGCGGCGGCGGCGGCATGGCCATCGAGTGCCTCGTGCTAGGG 120
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GCGGGGCAGGAGGTGGGGAAGAGCTGCGTGGTGGTCACCTTCGGCGGCGGGAAGCGCGTC 180
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      ATGTTCGACTGCGGCATGCACATGGGCCACCGCGACAGCCGCCGCTACCCGGACTTCGAC 240
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CGCCTCCTCGCCGACGGCGCCGCCGACTACACCGCCGCCATCTCCTGCGTCGNCATCACC 300
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CACTTCCATTTGGATCATATCGGAGCACTGCCGTACTTCACCGAGGTCTGCGGTTACCAC 360
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GGTCCAGTTTACATGACGTACCCGACAAAGGCTTTAGCTCCATTGATGCTGGAAGACTAT 420
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CGGAAAGTAATGGTAGATCATAGAGGAGAGGAAGAGCAATATAGCTATGAAGACATCCTA 480
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CGCTGTATGAGGAAAGTTATACCATTGGACCTGAAGCAGACCATTCAAGTAGATAAGGAC 540
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CTTTCGATCCGTGCCTATTATGCTGGACATGTTCTAGGGGCTGCAATGATATATGCAAAA 600
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GTTGGAGATGCTGCTATTGTGTACACTGGAGATTACAATATGACACCAGATAGGCACCTT 660
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GGAGCAGCGCAAATTGATCGTCTGAAGTTAGATCTGTTGATAACAGAATCAACATATGCT 720
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      AAAACTGTGCGTGACTCGAAGCATGCCCGAGAGAGGGAGTTCTTAAAAGCAGTCCATAAG 780
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      TGTGTTTCTGGAGGTGGTAAAGTTCTAATTCCAGCATTTGCTCTTGGAAGAGCACAGGAG 840
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CTATGCATACTACTGGATGACTATTGGGAAAGGATGAACCTGAAGATTCCTATTTATTTC 900
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      TCAGCTGGTTTAACCATTCAAGCCAACATGTACTACAAAATGCTTATTGGATGGACTAGC 960
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CAAAAGATCAAGAACAGCTACACAGTTCATAACCCATTTGACTTCAAGCATGTTTGCCAC 1020
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      TTTGAGCGTTCTTTCATTAACAATCCTGGTCCATGTGTGCTTTTTGCAACACCTGGTATG 1080
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      ATTAGTGGTGGATTTTCCCTTGAAGTGTTTAAGAAATGGGCTCCATCAGAAAAAAATCTG 1140
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GTTACACTTCCTGGATATTGTGTTGCTGGAACCATTGGCCATAAGTTGATGTCTGGAAAA 1200
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CCTACCAGGATTGACATAGACAAGGACACCCATATTGATGTCAGATGTCAGATCCATCAA 1260
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CTGTCATTCAGTCCTCATACAGACTCAAAGGGGATCATGGATCTTACTGAATTTCTTTCT 1320
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CCCAGTCATGTAATTTTAGTTCATGGCGAAAAACCTCAGATGGCTTTCTTGAAGGAGCGG 1380
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      ATCGAATCCGAGTTGGGGATGCAATGCTGTTACCCAGCTAACAACGAGACCGTCTTTATT 1440
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      CCGACATCCCAGAACTTGAAAATAAACGCCACGGAGAAGTTCATTGTGAGCTTTTGCATG 1500
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GATGAAACTGAAAATGATCCGCAGAAGCAGAACCTGAATTTTGGTGGGGACATGCCACAA 1560
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GGCTGCAGGACTGAAGGAGTAGCTGAGGGCGTTCTTCTGATGGAGAAGTCCAAGACTCCG 1620
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      AAGATTTTGCGCGAGGACCTGCTTCACTCGCTGGGCATGGAAACGCATTTTGTCCATTTT 1680
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      GAACCACTGCATCCGTCCAGCATTGAGGTAAAACATACTGGTGAGTCCGCGGTGCAGCAG 1740
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      AGCAGTTTAGAACATTTAGACTGCGAGTGAAATGAATGAACAATTCTTCTTTTCAACTAC 1800
consensus_11688#1      ------------------------------------------------------------
                                                                                   

consensus_11688#0      TCTCGACTTTGGAGACTTTTGAGAGGTATAGCCAGAAGGGGAAGAGTTGTGTAGTTAGAC 1860
consensus_11688#1      ----------------------CAGGACGAGACA--AGGGGAAGAGTTGTGTAGTTAGAC 36
                                              ***   ** **  ************************

consensus_11688#0      TGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTT-ATTT----------------- 1902
consensus_11688#1      TGTTGGAAAAAAAGAACACTTTTCATCCGTCAATTGTTTATTTTGGTGGATTAAACCCTA 96
                       ************************************** ****                 

consensus_11688#0      ------------------
consensus_11688#1      AGAAAAAAAAAAANAAAA 114
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)