cluster # 11689

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Oryza sativa
cluster # 11689 cluster # 11689 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11689#0 length = 2595 sequences # 8

consensus_11689#1 length = 677 sequences # 1

consensusID : consensus_11689#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2595
fasta sequence

                              [TATTAACAGTACTTGCATCCTCATCTCCATCTAAAGAGCCTGACAGGCTTCAGGTGAAGTGTATCACGTTTTCTCAGCCACCAGTTGGGAATGCTGCACTGAGAGACTACGTTCATCGAAGAGGATGGCAAGATTATTTCAAATCCTACTGTATTCCAGAGGACTTGGTGCCACGTATTTTATCGCCGGCATACTTTCACCACTATAATGCCCAAACACCTGATAACACTAACGCAAAATCTGATGAAGAAAAGGACACAAAATCTGTATGTTCAAAAGAGAACAATGGGGAGCAACTTGTTCTAGGTGTTGGTCCTGTTCAAAAGTCACTCTGGAGACTTTCAAAGCTTGTTCCTTTGGAAGGAGTGCGAAAAAGTTTAAGTGTGCTTCAGAAACAAACAAATAGTTTTGGAAAGGCACCATCACAGTTGGATAATTTCTTGCAATCAAAGGTTGATGAATCAGAAGAGGGGCTGCAATCTCTTGAGATTCAAGAAGGTTCAGAAGGAATTGCTCTTACCCCTTTATCTGATAAAGATGGAGGGCTCACTGAAGAAAATAACAAGACTGATAAAACTAATGTTTCTGAAGTTGGGGGTTCAAAACGGTGGAACAGAGTACCTTCTTTGCCTTCATATGTTCCATTTGGTGAGCTATACCTGTTGGGAGATTCATCAGTCAATACACTTTCAGATTCAGAGTACTCCAAGATGACATCGGTGCAGTCAGTTATAACGGAATTAAGAGAGCGTTTGCAATCACACTCAATGAAATCTTATAGGGCTCGCTTCCAGAAAATATATGACATCTGCATGTCTGCAAATGCCCAGCTTTTTACAGGCATTGAACAATTGCCACAATTTTCACATCTACAAGAACTACTCGGTCTAACAGCTGCTGATTCTGTTGAACTTGGCCATATTGTGGAGCCTCCTACTATTCGAACTGCCACTTCTATTCTTCCTCTTGGATGGAATGGCTACCCTGGTGATAAAAGTGCTGAACCCCTGAAAGTTGATATAATTGGACATGACCTGCATATGTGCACTCTTTTCCAGGCTCAGATAAATGGAAACTGGTATTCAACAGTCATTGAAACTCTACCAATGGTGTCATATTCATCAGATCAGGAAGTGCAGCCTACATTGCAAAAAATGCGCATTCTAGTTGGTCAGCCACTAAAGCAGCCTCCAAATTATATCAGTGAAGATTTTATGGTTTCTGTGGCCACGGGTACAGGGTCAAATCCAGATTATGGATTTGACTCATTGTTTGAAGATAAAGGTTGTTGCAAGGGTTTGAATGAATTTCTTATATACGGTACAAGTGATTTTGTAACTATATGTAAAGAGGTCTATGTGAGGACCAGGAGGGTGCGATTGCTTGGACTAGAGGGAGCAGGTAAAACTTCCTTTGCT-AAAGCATTGTTAGGGAC-ATTTAAAGAAAGAAGCAAAGCAGTTCTTGAGTGCATACATGTAGATTTGCATGGAAAAGGAGTTTCAAATGGTTTGTGCTACGTAGATTCGGCAACAGTGAACTTGCAGGAACTACCTTTAGAAGTTAGGCAGTTCAAAGAAGAATTGCAGTTAGGGATACATGATCTCAGCAGGAAGACTGACTTAGTTATTGTTGTGCATAACCTTGCTCATCGAATTCCTCAGTATCACCAGTCCAACACTTCTCAACCACAGCCAGCGCTTTCACTTCTCTTGGATGAAGCCAAGGCTCTTGGCATTCCATGGATCCTTGCAATAACTAATAAATTCTCCGTCAGTGCACATGAACAGAACGCATTGATCACTTCAGCAATGGAAGCTTATCAAGCCTCTCCTGACATGACTAAAGTTGTTAACTCTTCCCCATTTCTAATGCCAAGTGCCACAAA-TAGTTTGCGCCCCATCAGTTCAGCTAGTGGCAGTCTGAGGAACGAGAATCCTTCAGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCACT-CTCACCATTTCAGAGGAAGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCACAGCAATGAAGAGCCAGCATTTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGGGGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCACCTATTTATAACTTACAATAATAGCGTATAGTTAGCCCATATATGCACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCACAGAAAAGAGGTTAGTGCACCATGTATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTTTGATCTCTGTCAGACAAGCCAGTTTCATCTTCATTTGTAATTCTTTATTGATGCTAAGGTTTCAAAAAAAAAGAAAAAAAA]

[+] EMBL CB675027             [TATTAACAGTACTTGCATCCTCATCTCCATCTAAAGAGCCTGACAGGCTTCAGGTGAAGTGTATCACGTTTTCTCAGCCACCAGTTGGGAATGCTGCACTGAGAGACTACGTTCATCGAAGAGGATGGCAAGATTATTTCAAATCCTACTGTATTCCAGAGGACTTGGTGCCACGTATTTTATCGCCGGCATACTTTCACCACTATAATGCCCAAACACCTGATAACACTAACGCAAAATCTGATGAAGAAAAGGACACAAAATCTGTATGTTCAAAAGAGAACAATGGGGAGCAACTTGTTCTAGGTGTTGGTCCTGTTCAAAAGTCACTCTGGAGACTTTCAAAGCTTGTTCCTTTGGAAGGAGTGCGAAAAAGTTTAAGTGTGCTTCAGAAACAAACAAATAGTTTTGGAAAGGCACCATCACAGTTGGATAATTTCTTGCAATCAAAGGTTGATGAATCAGAAGAGGGGCTGCAATCTCTTGAGATTCAAGAAGGTTCAGAAGGAATTGCTCTTACCCCTTTATCTGATAAAGATGGAGGGCTCACTGAAGAAAATAACAAGACTGATAAAACTAATGTTTCTGAAGTTGGGGGTTCAAAACGGTGGAACAGAGTACCTTCTTTGCCTTCATATGTTCCATTTGGTGAGCTATACCTGTTGGGAGATTCATCAGTCAATACACTTTCAGATTCAGAGTACTCCAAGATGACATCGGTGCAGTCAGTTATAACGGAATTAAGAGAGCGTTTGCAATCACACTCAATGAAATCCTATAAGGCTCGCTTCCAG AAATATATGACATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C72148               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTTACCCCTTTATCTGATAAAGATGGAGGGCTCACTGAAGAAAATAACAAGACTGATAAAACTAATGTTTCTGAAGTTGGGGGTTCAAAACGGTGGAACAGAGTACCTTCTTTGCCTTCATATGTTCCATTTGGTGAGCTATACCTGTTGGGAGATTCATCAGTCAATACACTTTCAGATTCAGAGTACTCCAAGATGACATCGGTGCAGTCAGTTATAACGGAATTAAGAGAGCGTTTGCAATCACACTCAATGAAATCTTATAGGGCTCGCTTCCAGAAAATATATGACATCTGCATGTCTGCAAATGCCCAGCTTTTTACAGGCATTGAACAATTGCCACAATTTTCACATCTACAAGAACTACTCGGTCTAACAGCTGCTGATTCTGTTGAACTTGGCCATATTGTGGAGCCTCCTACTATTCGAACTGCCACTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB671082             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TACCTTCTTTGCCTTCATATGTTCCATTTGGTGAGCTATACCTGTTGGGAGATTCATCAGTCAATACACTTTCAGATTCAGAGTACTCCAAGATGACATCGGTGCAGTCAGTTATAACGGAATTAAGAGAGCGTTTGCAATCACACTCAATGAAATCTTATAGGGCTCGCTTCCAGAAAATATATGACATCTGCATGTCTGCAAATGCCCAGCTTTTTACAGGCATTGAACAATTGCCACAATTTTCACATCTACAAGAACTACTCGGTCTAACAGCTGCTGATTCTGTTGAACTTGGCCATATTGTGGAGCCTCCTACTATTCGAACTGCCACTTCTATTCTTCCTCTTGGATGGAATGGCTACCCTGGTGATAAAAGTGCTGAACCCCTGAAAGTTGATATAATTGGACATGACCTGCATATGTGCACTCTTTTCCAGGCTCAGATAAATGGAAACTGGTATTCAACAGTCATTGAAACTCTACCAATGGTGTCATATTCATCAGATCAGGAAGTGCAGCCTACATTGCAAAAAATGCGCATTCTAGTTGGTCAGCCACTAAAGCAGCCTCCAAATTATATCAGTGAAGATTTTATGGTTTCTGTGGCCACGGGTACAGGGTCAAATCCAGATTATGGATTTGACTCATTGTTTGAAGATAAAGGTTGTTGCAAGGGTTTGAATGAATTTCTTATATACGGTACAAGTGATTTTGTAACTATATGTAAAGAGGTCTATGTGAGGACCAGGAGGGTGCGATTGCTTGGACTAGAGGGAGCAGGTAAAACTTCCTTTGCT AAAGCATTGTTAGGGAC ATTTAAAGAAAGAAGCAAAGCAGTTCTTGAGTGCATACATGTAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK120085             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCACACTCAATGAAATCTTATAGGGCTCGCTTCCAGAAAATATATGACATCTGCATGTCTGCAAATGCCCAGCTTTTTACAGGCATTGAACAATTGCCACAATTTTCACATCTACAAGAACTACTCGGTCTAACAGCTGCTGATTCTGTTGAACTTGGCCATATTGTGGAGCCTCCTACTATTCGAACTGCCACTTCTATTCTTCCTCTTGGATGGAATGGCTACCCTGGTGATAAAAGTGCTGAACCCCTGAAAGTTGATATAATTGGACATGACCTGCATATGTGCACTCTTTTCCAGGCTCAGATAAATGGAAACTGGTATTCAACAGTCATTGAAACTCTACCAATGGTGTCATATTCATCAGATCAGGAAGTGCAGCCTACATTGCAAAAAATGCGCATTCTAGTTGGTCAGCCACTAAAGCAGCCTCCAAATTATATCAGTGAAGATTTTATGGTTTCTGTGGCCACGGGTACAGGGTCAAATCCAGATTATGGATTTGACTCATTGTTTGAAGATAAAGGTTGTTGCAAGGGTTTGAATGAATTTCTTATATACGGTACAAGTGATTTTGTAACTATATGTAAAGAGGTCTATGTGAGGACCAGGAGGGTGCGATTGCTTGGACTAGAGGGAGCAGGTAAAACTTCC TTGCTAAAAGCATTGTTA GGACAATTTAAAGAAAGAAGCAAAGCAGTTCTTGAGTGCATACATGTAGATTTGCATGGAAAAGGAGTTTCAAATGGTTTGTGCTACGTAGATTCGGCAACAGTGAACTTGCAGGAACTACCTTTAGAAGTTAGGCAGTTCAAAGAAGAATTGCAGTTAGGGATACATGATCTCAGCAGGAAGACTGACTTAGTTATTGTTGTGCATAACCTTGCTCATCGAATTCCTCAGTATCACCAGTCCAACACTTCTCAACCACAGCCAGCGCTTTCACTTCTCTTGGATGAAGCCAAGGCTCTTGGCATTCCATGGATCCTTGCAATAACTAATAAATTCTCCGTCAGTGCACATGAACAGAACGCATTGATCACTTCAGCAATGGAAGCTTATCAAGCCTCTCCTGACATGACTAAAGTTGTTAACTCTTCCCCATTTCTAATGCCAAGTGCCACAAA TAGTTTGCGCCCCATCAGTTCAGCTAGTGGCAGTCTGAGGAACGAGAATCCTTCAGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCACT CTCACCATTTCAGAGGAAGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCACAGCAATGAAGAGCCAGCATTTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGGGGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCACCTATTTATAACTTACAATAATAGCGTATAGTTAGCCCATATATGCACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCACAGAAAAGAGGTTAGTGCACCATGTATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTTTGATCTCTGTCAGACAAGCCAGTTTCATCTTCATTTGTAATTCTTTATTGATGCTAAGGTTTC                  ]
[-] EMBL CB671083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGCATTGATCACTTCAGCAATGGAAGCTTATCAAGCCTCTCCTGACATGACTAAAGTTGTTAACTCTTCCCCATTTCTAATGCCAAGTGCCACAAA TAGTTTGCGCCCCATCAGTTCAGCTAGTGGCAGTCTGAGGAACGAGAATCCTTCAGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCACT CTCACCATTTCAGAGGAAGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCACAGCAATGAAGAGCCAGCATTTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGGGGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCACCTATTTATAACTTACAATAATAGCGTATAGTTAGCCCATATATGCACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCACAGAAAAGAGGTTAGTGCACCATGTATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTTTGATCTCTGTCAGACAAGCCAGTTTCATCTTCATTTGTAATTCTTTATTGATGCTAAGGTTT                   ]
[+] EMBL AU093885             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATTTCTAATGCNAAGTCCCACAAATTAGTTTGCGCCCCATCAGTTCAGCTAGTGGCAGTCTGAGGAACGAGAATCCTTCAGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCACT CTCACCATTTCAGAGGAAGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCACAGCAATGAAGAGCCAGCATTTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGGGGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCACCTATTTATAACTTACAATAATAGCGTATAGTTAGCCCATATATGCACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCACAGAAAAGAGGTTAGTGCACCATGTATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTTTGATCTCTGTCAGACAAGCCAGTTTCATCTTCAaaaa                                            ]
[-] EMBL CB675028             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCACAAA TAGTTTGCGCCCCATCAGTTCAGCTAGTGGCAGTCTGAGGAACGAGAATCCTTCAGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCACT CTCACCATTTCAGAGGAAGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCCCAGCAATGAAGAGCCAGCATTTGAGGAGCTTTTTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATTTTTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTGGGGGTTGTAATGGCTGTAATAATGGGAGGTGCGTCAGCTTTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCCCCTATTTATAACTTACAATAATAGGGTATAGTTAGCCCATATATGCCCCTGTATGACTGAGGAATGCCTGGAACAAGGTTTTAGTGTAGACCCCAGAAAAGAGGTTAGTGCCCCATGTATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAAAGTTTG                                                                               ]
[-] EMBL CA762219             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    taaGACCAAGAATCCTTCAGCCACAGCTGCTTCTTATCCACT AACCTTTCCCTCCTGACCATTTGAGAGGAAGGACATTGTTATGCATGTGCAGGGGGTCCCTGCCCTTCGTCAACTTGTACATCAAGTAATTCCCAGCAATGAAGAGCCAGCATTTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGACAGACAGAAACCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTTGGGGTTGTAATGCCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTTATCGTTTTCTTTTCACCTATTTATAACTTACAATAATAGGGTATAGTTAGCCCATATATGCCCCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCACAGAAAAGAGGTTAGTGCCCCATATATATATAGGTAGTCCATAGCATAGTGCCACATGTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTATGATCTCTGTCAGACAAGCCAGTTTCATCTTCATTTGTAATTCTTTATTGATGCTAAAAAAAAAAAAAAAAAGAAAAAAAA]




>consensus_11689#0
TATTAACAGTACTTGCATCCTCATCTCCATCTAAAGAGCCTGACAGGCTTCAGGTGAAGT
GTATCACGTTTTCTCAGCCACCAGTTGGGAATGCTGCACTGAGAGACTACGTTCATCGAA
GAGGATGGCAAGATTATTTCAAATCCTACTGTATTCCAGAGGACTTGGTGCCACGTATTT
TATCGCCGGCATACTTTCACCACTATAATGCCCAAACACCTGATAACACTAACGCAAAAT
CTGATGAAGAAAAGGACACAAAATCTGTATGTTCAAAAGAGAACAATGGGGAGCAACTTG
TTCTAGGTGTTGGTCCTGTTCAAAAGTCACTCTGGAGACTTTCAAAGCTTGTTCCTTTGG
AAGGAGTGCGAAAAAGTTTAAGTGTGCTTCAGAAACAAACAAATAGTTTTGGAAAGGCAC
CATCACAGTTGGATAATTTCTTGCAATCAAAGGTTGATGAATCAGAAGAGGGGCTGCAAT
CTCTTGAGATTCAAGAAGGTTCAGAAGGAATTGCTCTTACCCCTTTATCTGATAAAGATG
GAGGGCTCACTGAAGAAAATAACAAGACTGATAAAACTAATGTTTCTGAAGTTGGGGGTT
CAAAACGGTGGAACAGAGTACCTTCTTTGCCTTCATATGTTCCATTTGGTGAGCTATACC
TGTTGGGAGATTCATCAGTCAATACACTTTCAGATTCAGAGTACTCCAAGATGACATCGG
TGCAGTCAGTTATAACGGAATTAAGAGAGCGTTTGCAATCACACTCAATGAAATCTTATA
GGGCTCGCTTCCAGAAAATATATGACATCTGCATGTCTGCAAATGCCCAGCTTTTTACAG
GCATTGAACAATTGCCACAATTTTCACATCTACAAGAACTACTCGGTCTAACAGCTGCTG
ATTCTGTTGAACTTGGCCATATTGTGGAGCCTCCTACTATTCGAACTGCCACTTCTATTC
TTCCTCTTGGATGGAATGGCTACCCTGGTGATAAAAGTGCTGAACCCCTGAAAGTTGATA
TAATTGGACATGACCTGCATATGTGCACTCTTTTCCAGGCTCAGATAAATGGAAACTGGT
ATTCAACAGTCATTGAAACTCTACCAATGGTGTCATATTCATCAGATCAGGAAGTGCAGC
CTACATTGCAAAAAATGCGCATTCTAGTTGGTCAGCCACTAAAGCAGCCTCCAAATTATA
TCAGTGAAGATTTTATGGTTTCTGTGGCCACGGGTACAGGGTCAAATCCAGATTATGGAT
TTGACTCATTGTTTGAAGATAAAGGTTGTTGCAAGGGTTTGAATGAATTTCTTATATACG
GTACAAGTGATTTTGTAACTATATGTAAAGAGGTCTATGTGAGGACCAGGAGGGTGCGAT
TGCTTGGACTAGAGGGAGCAGGTAAAACTTCCTTTGCTAAAGCATTGTTAGGGACATTTA
AAGAAAGAAGCAAAGCAGTTCTTGAGTGCATACATGTAGATTTGCATGGAAAAGGAGTTT
CAAATGGTTTGTGCTACGTAGATTCGGCAACAGTGAACTTGCAGGAACTACCTTTAGAAG
TTAGGCAGTTCAAAGAAGAATTGCAGTTAGGGATACATGATCTCAGCAGGAAGACTGACT
TAGTTATTGTTGTGCATAACCTTGCTCATCGAATTCCTCAGTATCACCAGTCCAACACTT
CTCAACCACAGCCAGCGCTTTCACTTCTCTTGGATGAAGCCAAGGCTCTTGGCATTCCAT
GGATCCTTGCAATAACTAATAAATTCTCCGTCAGTGCACATGAACAGAACGCATTGATCA
CTTCAGCAATGGAAGCTTATCAAGCCTCTCCTGACATGACTAAAGTTGTTAACTCTTCCC
CATTTCTAATGCCAAGTGCCACAAATAGTTTGCGCCCCATCAGTTCAGCTAGTGGCAGTC
TGAGGAACGAGAATCCTTCAGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCACTCTCAC
CATTTCAGAGGAAGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTG
TACATCAAGTAATTCACAGCAATGAAGAGCCAGCATTTGAGGAGCTTTCTCGTGAGAGAT
TGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGA
AGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGGGG
TTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCATC
GTTTTCTTTTCACCTATTTATAACTTACAATAATAGCGTATAGTTAGCCCATATATGCAC
CTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCACAGAAAAGAGGTTAG
TGCACCATGTATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATA
GGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTTTGATCT
CTGTCAGACAAGCCAGTTTCATCTTCATTTGTAATTCTTTATTGATGCTAAGGTTTCAAA
AAAAAAGAAAAAAAA

consensusID : consensus_11689#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence

                              [CCCCATCAGTTCAGCTAGTGGCAGTCTGAGAACCGAGAATCCTCAGGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCCCTCTCCGCCATTTCAGAGGAAGGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCCCAGCAATGAAGAGCCAGCATCTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGGGGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCACCTATTTATAACTTCCAATAATAGCGTATAGTTAGCCCATATATGCACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCCCAGAAAAGAGGTTAGTGCCCCATATATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTATGATCTCTGTCAGACAAGCCAGTTTCATCTTCCTTTGTAAAAAAAAAAAAAAAAA]

[-] EMBL CA761298             [CCCCATCAGTTCAGCTAGTGGCAGTCTGAGAACCGAGAATCCTCAGGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCCCTCTCCGCCATTTCAGAGGAAGGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCCCAGCAATGAAGAGCCAGCATCTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGGGGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCACCTATTTATAACTTCCAATAATAGCGTATAGTTAGCCCATATATGCACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCCCAGAAAAGAGGTTAGTGCCCCATATATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTATGATCTCTGTCAGACAAGCCAGTTTCATCTTCCTTTGTAAAAAAAAAAAAAAAAA]




>consensus_11689#1
CCCCATCAGTTCAGCTAGTGGCAGTCTGAGAACCGAGAATCCTCAGGGCAGAGCTGCTTT
TTATCCAGTAAACTTTTCCCTCTCCGCCATTTCAGAGGAAGGGACATTGTTATGCATGTT
GAGGGTGTCACTGCCCTTCGTCAACTTGTACATCAAGTAATTCCCAGCAATGAAGAGCCA
GCATCTGAGGAGCTTTCTCGTGAGAGATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCA
TCTCTGCAAGGGAAGCGGAAGCCCCAGAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTA
GGTGCATCACTTGGTGCCGGACTCGGGGTTGTAATGGCTGTAATAATGGGAGCTGCGTCA
GCTCTCCGGAAGCCATGACTACTTCATCGTTTTCTTTTCACCTATTTATAACTTCCAATA
ATAGCGTATAGTTAGCCCATATATGCACCTGTATGACTGAGGAATGCCTGGAACAAGGCT
CTAGTGTAGACCCCAGAAAAGAGGTTAGTGCCCCATATATATATAGGTAGTCCATAGCAT
AGTGCCACATTTGGCAGTGTATAGAATAGGTTAATATTAGCGATTCATCTTTGCTTAAGA
TGGCGCTGTTAAGTACAGTCTATGATCTCTGTCAGACAAGCCAGTTTCATCTTCCTTTGT
AAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11689#0      TATTAACAGTACTTGCATCCTCATCTCCATCTAAAGAGCCTGACAGGCTTCAGGTGAAGT 60
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      GTATCACGTTTTCTCAGCCACCAGTTGGGAATGCTGCACTGAGAGACTACGTTCATCGAA 120
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      GAGGATGGCAAGATTATTTCAAATCCTACTGTATTCCAGAGGACTTGGTGCCACGTATTT 180
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TATCGCCGGCATACTTTCACCACTATAATGCCCAAACACCTGATAACACTAACGCAAAAT 240
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CTGATGAAGAAAAGGACACAAAATCTGTATGTTCAAAAGAGAACAATGGGGAGCAACTTG 300
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TTCTAGGTGTTGGTCCTGTTCAAAAGTCACTCTGGAGACTTTCAAAGCTTGTTCCTTTGG 360
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      AAGGAGTGCGAAAAAGTTTAAGTGTGCTTCAGAAACAAACAAATAGTTTTGGAAAGGCAC 420
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CATCACAGTTGGATAATTTCTTGCAATCAAAGGTTGATGAATCAGAAGAGGGGCTGCAAT 480
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CTCTTGAGATTCAAGAAGGTTCAGAAGGAATTGCTCTTACCCCTTTATCTGATAAAGATG 540
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      GAGGGCTCACTGAAGAAAATAACAAGACTGATAAAACTAATGTTTCTGAAGTTGGGGGTT 600
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CAAAACGGTGGAACAGAGTACCTTCTTTGCCTTCATATGTTCCATTTGGTGAGCTATACC 660
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TGTTGGGAGATTCATCAGTCAATACACTTTCAGATTCAGAGTACTCCAAGATGACATCGG 720
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TGCAGTCAGTTATAACGGAATTAAGAGAGCGTTTGCAATCACACTCAATGAAATCTTATA 780
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      GGGCTCGCTTCCAGAAAATATATGACATCTGCATGTCTGCAAATGCCCAGCTTTTTACAG 840
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      GCATTGAACAATTGCCACAATTTTCACATCTACAAGAACTACTCGGTCTAACAGCTGCTG 900
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      ATTCTGTTGAACTTGGCCATATTGTGGAGCCTCCTACTATTCGAACTGCCACTTCTATTC 960
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TTCCTCTTGGATGGAATGGCTACCCTGGTGATAAAAGTGCTGAACCCCTGAAAGTTGATA 1020
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TAATTGGACATGACCTGCATATGTGCACTCTTTTCCAGGCTCAGATAAATGGAAACTGGT 1080
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      ATTCAACAGTCATTGAAACTCTACCAATGGTGTCATATTCATCAGATCAGGAAGTGCAGC 1140
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CTACATTGCAAAAAATGCGCATTCTAGTTGGTCAGCCACTAAAGCAGCCTCCAAATTATA 1200
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TCAGTGAAGATTTTATGGTTTCTGTGGCCACGGGTACAGGGTCAAATCCAGATTATGGAT 1260
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TTGACTCATTGTTTGAAGATAAAGGTTGTTGCAAGGGTTTGAATGAATTTCTTATATACG 1320
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      GTACAAGTGATTTTGTAACTATATGTAAAGAGGTCTATGTGAGGACCAGGAGGGTGCGAT 1380
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TGCTTGGACTAGAGGGAGCAGGTAAAACTTCCTTTGCTAAAGCATTGTTAGGGACATTTA 1440
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      AAGAAAGAAGCAAAGCAGTTCTTGAGTGCATACATGTAGATTTGCATGGAAAAGGAGTTT 1500
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CAAATGGTTTGTGCTACGTAGATTCGGCAACAGTGAACTTGCAGGAACTACCTTTAGAAG 1560
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TTAGGCAGTTCAAAGAAGAATTGCAGTTAGGGATACATGATCTCAGCAGGAAGACTGACT 1620
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      TAGTTATTGTTGTGCATAACCTTGCTCATCGAATTCCTCAGTATCACCAGTCCAACACTT 1680
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CTCAACCACAGCCAGCGCTTTCACTTCTCTTGGATGAAGCCAAGGCTCTTGGCATTCCAT 1740
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      GGATCCTTGCAATAACTAATAAATTCTCCGTCAGTGCACATGAACAGAACGCATTGATCA 1800
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CTTCAGCAATGGAAGCTTATCAAGCCTCTCCTGACATGACTAAAGTTGTTAACTCTTCCC 1860
consensus_11689#1      ------------------------------------------------------------
                                                                                   

consensus_11689#0      CATTTCTAATGCCAAGTGCCACAAATAGTTTGCGCCCCATCAGTTCAGCTAGTGGCAGTC 1920
consensus_11689#1      ----------------------------------CCCCATCAGTTCAGCTAGTGGCAGTC 26
                                                         **************************

consensus_11689#0      TGAGGAACGAGAATCCTTCAGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCACTCTC-A 1979
consensus_11689#1      TGAGAACCGAGAATCCTCAGGGCAGAGCTGCTTTTTATCCAGTAAACTTTTCCCTCTCCG 86
                       **** * **********   ******************************** *****  

consensus_11689#0      CCATTTCAGAGGAAGG-ACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACT 2038
consensus_11689#1      CCATTTCAGAGGAAGGGACATTGTTATGCATGTTGAGGGTGTCACTGCCCTTCGTCAACT 146
                       **************** *******************************************

consensus_11689#0      TGTACATCAAGTAATTCACAGCAATGAAGAGCCAGCATTTGAGGAGCTTTCTCGTGAGAG 2098
consensus_11689#1      TGTACATCAAGTAATTCCCAGCAATGAAGAGCCAGCATCTGAGGAGCTTTCTCGTGAGAG 206
                       ***************** ******************** *********************

consensus_11689#0      ATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCA 2158
consensus_11689#1      ATTGTCGCTGGAGCTGGAGAGAGAGAAAGCAGCATCTCTGCAAGGGAAGCGGAAGCCCCA 266
                       ************************************************************

consensus_11689#0      GAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGG 2218
consensus_11689#1      GAAGAGAGATGGCTCTGTTACAGCTGCTGCCGTAGGTGCATCACTTGGTGCCGGACTCGG 326
                       ************************************************************

consensus_11689#0      GGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCA 2278
consensus_11689#1      GGTTGTAATGGCTGTAATAATGGGAGCTGCGTCAGCTCTCCGGAAGCCATGACTACTTCA 386
                       ************************************************************

consensus_11689#0      TCGTTTTCTTTTCACCTATTTATAACTTACAATAATAGCGTATAGTTAGCCCATATATGC 2338
consensus_11689#1      TCGTTTTCTTTTCACCTATTTATAACTTCCAATAATAGCGTATAGTTAGCCCATATATGC 446
                       **************************** *******************************

consensus_11689#0      ACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCACAGAAAAGAGGTT 2398
consensus_11689#1      ACCTGTATGACTGAGGAATGCCTGGAACAAGGCTCTAGTGTAGACCCCAGAAAAGAGGTT 506
                       ********************************************** *************

consensus_11689#0      AGTGCACCATGTATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAA 2458
consensus_11689#1      AGTGCCCCATATATATATAGGTAGTCCATAGCATAGTGCCACATTTGGCAGTGTATAGAA 566
                       ***** **** *************************************************

consensus_11689#0      TAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTTTGAT 2518
consensus_11689#1      TAGGTTAATATTAGCGATTCATCTTTGCTTAAGATGGCGCTGTTAAGTACAGTCTATGAT 626
                       ******************************************************* ****

consensus_11689#0      CTCTGTCAGACAAGCCAGTTTCATCTTCATTTGTAATTCTTTATTGATGCTAAGGTTTCA 2578
consensus_11689#1      CTCTGTCAGACAAGCCAGTTTCATCTTCCTTTGTAA-----------------------A 663
                       **************************** *******                       *

consensus_11689#0      AAAAAAAAGAAAAAAAA 2595
consensus_11689#1      AAAAAAAAAAAAAA--- 677
                       ******** *****