These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11692#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1400 fasta sequence [NNTNTNTNACCCTTTTCTAGAGGGNCNAAAGGGNACCGGGCCCCCCCNCGAGGNCGACCCACGCAGCATGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG-GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCACCGTCTCCGGCGTCTTCGCCGCC-GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGTCCATGATCCTCCACCCGACGCTCGTCGTCCCCTTCCTCGGCGTCGGCGAGTGGCTCCGCCGCGACCGCGAGCCGCCGGAGGAGGACCCGTACTGCATCTTCAAGCAGGCGCACGGCCGGAGCCTGTGGGAGCTGGCCGGCCGCGACGCGGCGTTCGACGCGCTCATCAACGACGGGATGGTCTCGGACAGCCGCGTCATCATGGACTACGTCGTGAGGGAGCACGGCGAGGTGTTCCGGGGGATCGCCTCCCTGGTCGACCTCGCCGGCGGGCTCGGCGCGGCGGCGCAGGTCATCTCGAAGGCGTTCCCGGAGGTGAGGTGCAGCGTGATGGACCTCGGGCACGTCGTCGCCAAGGCTCCCGCCGGCACCGACGTCGAGTACATCGCCGGCGACATGTTTGAGAGTGTGCCACCGGCAGACGCTGTCTTCCTCAAGTGGGTTCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAAAAATAGGAAAACGACACGGGTGGACT] [-] EMBL AU222582 [NNTNTNTNACCCTTTTCTAGAGGGNCNAAAGGGNACCGGGCCCCCCCNCGAGGNCGACCCACGCGTCCGGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACGNTTTTTTNCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCAC ] [+] EMBL AK068905 [ ggAGCATGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCACCGTCTCCGGCGTCTTCGCCGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGTCCATGATCCTCCACCCGACGCTCGTCGTCCCCTTCCTCGGCGTCGGCGAGTGGCTCCGCCGCGACCGCGAGCCGCCGGAGGAGGACCCGTACTGCATCTTCAAGCAGGCGCACGGCCGGAGCCTGTGGGAGCTGGCCGGCCGCGACGCGGCGTTCGACGCGCTCATCAACGACGGGATGGTCTCGGACAGCCGCGTCATCATGGACTACGTCGTGAGGGAGCACGGCGAGGTGTTCCGGGGGATCGCCTCCCTGGTCGACCTCGCCGGCGGGCTCGGCGCGGCGGCGCAGGTCATCTCGAAGGCGTTCCCGGAGGTGAGGTGCAGCGTGATGGACCTCGGGCACGTCGTCGCCAAGGCTCCCGCCGGCACCGACGTCGAGTACATCGCCGGCGACATGTTTGAGAGTGTGCCACCGGCAGACGCTGTCTTCCTCAAGTGGGTTCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAACTATAGGAAAACGACACGGGTGGACT] [+] EMBL C73022 [ AGCATGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCACCGTCTCCGGCGTCTTCGCCGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGTCCATGATCCTCCACCCGACGCTCGTCGTCCCCTTCCTCGGCGTCGGCGAGTGGCTCCGCCGCGACCGCGAGCCGC ] [+] EMBL C71958 [ AGCTCACTGAGAGTAAGTNCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTNACCGTCTCCGGCGTCTTCGNCGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTTTACGAGCTCANGCCGTCGTCGC ] [+] EMBL C72759 [ CTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCA NCCACCTCCACG GCGGCG CGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGAGCTCACCGTCTCCGGCGTCTT NAAGCCNGCCGTCAAGCNCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAA CTGTNCGGCATCATGTCCATGATCCTCCAACCGANGCTCGTGGT CCCTTCNTCGG ] [+] EMBL C73015 [ TGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAG CCACCTCCACG GCGGCG CGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGNCGCCTCATGCGCGNGCTCACCGTCTCCGGCGTCTTCG CGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTNAGNCCGTGTACGAGCTCACGCCGTCGTCGCGGNTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGT NATGATCCTCagcga ] [+] EMBL AU101176 [ tcCGGGCACGTCGTCGCCAA GCTCCCGCCGGCACCGACGTCGAGTACATCGCCGGCGACATGTTTGAGAGTGTGCCACCGGCAGACGCTGTCTTCCTCAAGTGGGTTCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATAaaaaaa ] [+] EMBL AU165365 [ GTCTTCCTCAAGTGGGTNCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCNTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTNCCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAAAAAa ] [+] EMBL AU182423 [ TCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||