cluster # 11707

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Oryza sativa
cluster # 11707 cluster # 11707 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11707#0 length = 1520 sequences # 5

consensus_11707#1 length = 1511 sequences # 3
consensus_11707#2 length = 361 sequences # 1

consensusID : consensus_11707#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1520
fasta sequence

                              [TTCCGCCGCGACTTTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG-ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCCCTCATATTGGGATGCAATTTTGACCGTTAAGCATCAACATGGCTCATTT]

[+] EMBL AK059263             [TTCCGCCGCGACTTTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGGCTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTCTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTA                                                                                                                                                                                              ]
[+] EMBL AK065593             [            TTTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTAT                                                                        ]
[+] EMBL CB657733             [             TTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAGAATC ACANGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGNGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB657734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCCCTCATATTGGGATGCAATTTTGACCGTTAAGCAT               ]
[-] EMBL CB654191             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCCCTCATATTGGGATGCAATTTTGACCGTTAAGCATCAACATGGCTCATTT]




>consensus_11707#0
TTCCGCCGCGACTTTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTC
TCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCT
TGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCC
GCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACG
ACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGG
CTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCT
TATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTA
TATCTGGTGGTGTGCAGAGTGCGACTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTG
TTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGC
ATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTTTCTAATGACTCGATGG
GCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACC
CAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCA
CAATATTTGGTGATGTATATCCTTTGCCAGAAGATCAACAGGAGTGGGCACATAAGCAGT
ATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGA
TGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATG
TCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCT
TAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGG
AGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCC
AGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACAC
TAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTC
AAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGAC
CCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAA
TAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGT
GTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATG
CTTTGTATCGGTGGACCTAATGGTTGATGCCCTCATATTGGGATGCAATTTTGACCGTTA
AGCATCAACATGGCTCATTT

consensusID : consensus_11707#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1511
fasta sequence

                              [TCCGTACGAGATAGGCACGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGGCGATCGCCGGAGCAGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGCGGCTCCTCGCCAGCGCCGCCGAAGGAGGACGAAGAGGGGAGGAGGGCTCTCCGGCCTCCTCCAGTGATGCGGATGACCAGGCGGAAGCCTTGCCCTTCCTCGAGAGTGATAGCCATCATACGCAAACAAGTAAACATGGTGAGAGTGGTGGGAGCAACTCTGGTGGATCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTTCATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCTCATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCTCTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCCATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGATGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCTGACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCATCAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGAGGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAAAAATGGTTTGACAATTGAGATTATGCA]

[+] EMBL AK072039             [TCCGTACGAGATAGGCACGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGGCGATCGCCGGAGCAGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGCGGCTCCTCGCCAGCGCCGCCGAAGGAGGACGAAGAGGGGAGGAGGGCTCTCCGGCCTCCTCCAGTGATGCGGATGACCAGGCGGAAGCCTTGCCCTTCCTCGAGAGTGATAGCCATCATACGCAAACAAGTAAACATGGTGAGAGTGGTGGGAGCAACTCTGGTGGATCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTTCATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCTCATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCTCTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCCATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGATGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCTGACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCATCAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGAGGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAAAAATGGTTTGACAATTGAGATTATGCA]
[+] EMBL AK070451             [                                                                                                                                                                                                                                                                                                                                                          TCATACGCAAACAAGTAAACATGGTGAGAGTGGTGGGAGCAACTCTGGTGGATCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTTCATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCTCATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCTCTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCCATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGATGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCTGACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCATCAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGAGGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATGGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAA                           ]
[+] EMBL AU100664             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCCATCCCATCAGTGGGCCAACTTTTACTNTTACAAAATGCAGACAATANGTGACATATATTTCATNGGAGGTTTTGGCACTGTTGCTTGGNTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTNCGACTGNTGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCNCTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAAAAATGGTTTGACAAaaaa         ]




>consensus_11707#1
TCCGTACGAGATAGGCACGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGC
CGCCGGCGATCGCCGGAGCAGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAG
CCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAAT
CCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGCGGCTCCTCG
CCAGCGCCGCCGAAGGAGGACGAAGAGGGGAGGAGGGCTCTCCGGCCTCCTCCAGTGATG
CGGATGACCAGGCGGAAGCCTTGCCCTTCCTCGAGAGTGATAGCCATCATACGCAAACAA
GTAAACATGGTGAGAGTGGTGGGAGCAACTCTGGTGGATCTAGAGCCGGCCTATTCAGAA
CACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTTCATGATTTACCCCCACCGGCTC
GAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCTCATCTGTGTACTGTCATGTCTC
GGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCTCTAGTGGATTTTGCACCTGATC
CAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCCATCCACACAAGGAATCTTCTGG
AAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGATGGAGTGGACTGTCAAATGCAC
GTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCTGACCTGCAGGAATGGGCTCATC
AACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCATCAGTGGGGCAACTTTTACTATT
ACAAAATGCAGACAATAAGTGACATATATTTCATTGGAGGTTTTGGCACTGTTGCTTGGT
TAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTGCGACTGATGGTGGGGAGC
AAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCG
AAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAG
TTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCCTTTGAGCTGCATTACAGCGTAG
AAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATG
CCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCG
CCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAG
ATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACT
AAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCACTTCTAGTGCTGGGTTT
GATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAAAAATGGTTTGACAATT
GAGATTATGCA

consensusID : consensus_11707#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 361
fasta sequence

                              [CGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGNTCTGNCCATGNCTATGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGGGCTTCCTCGCCAGCGGCGCCGAAGAGGACGAAGAGGGGAGGAGGGTCTNCGGCCTCCTCCAGTGATGCGGATGACCAGGGTGACTNTTGNCCTTTCCTTGAGAGTTATAGCCATCATACGTAAACAAGTAAACATGGGTGAGAGTT]

[+] EMBL C26133               [CGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGNTCTGNCCATGNCTATGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGGGCTTCCTCGCCAGCGGCGCCGAAGAGGACGAAGAGGGGAGGAGGGTCTNCGGCCTCCTCCAGTGATGCGGATGACCAGGGTGACTNTTGNCCTTTCCTTGAGAGTTATAGCCATCATACGTAAACAAGTAAACATGGGTGAGAGTT]




>consensus_11707#2
CGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGNTCTGNCCATGN
CTATGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGC
GGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCA
GCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGGGCTTCCTCGCCAGCGGCGCCGAAGA
GGACGAAGAGGGGAGGAGGGTCTNCGGCCTCCTCCAGTGATGCGGATGACCAGGGTGACT
NTTGNCCTTTCCTTGAGAGTTATAGCCATCATACGTAAACAAGTAAACATGGGTGAGAGT
T

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11707#1      TCCGTACGAGATAGGCACGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGC 60
consensus_11707#2      -----------------CGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGC 43
consensus_11707#0      ------------------------TTCCGCCGCGACTTTCTCTCTCCTCCTCCTCACCGT 36
                                               *   *  ** ***    *  *** **  * ** ** 

consensus_11707#1      CGCCGG-CGAT-CGCCGGAGCAGCGTCGCCATCCCCGTCCC------GCTCCCTCTCCCG 112
consensus_11707#2      CGCCGNTCTGN-CCATGNCTATGCGTCGCCATCCCCGTCCC------GCTCCCTCTCCCG 96
consensus_11707#0      CGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCA 96
                       ** *   *    *          *  ****   *******       **** * *   * 

consensus_11707#1      CAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAG 172
consensus_11707#2      CAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAG 156
consensus_11707#0      CCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGC 156
                       * *  *   **  ** * ** *   ********     **  ***    ***  * **  

consensus_11707#1      CGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGC-GCGC 231
consensus_11707#2      CGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGC-GCGG 215
consensus_11707#0      GGTCA--CTCGCC-CTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAG 213
                        ****    **** * * *  ** ** **    *  *** ** ** *  **  ** **  

consensus_11707#1      GGCTCCTCGCCAGCGCCGCCGAAGGAGGACGAAGAGG--GGAGGAGGGCTCTCCGG-CCT 288
consensus_11707#2      GCTTCCTCGCCAGCGGCGCCGAAG-AGGACGAAGAGG--GGAGGAGGG-TCTNCGG-CCT 270
consensus_11707#0      CCGGTGGCGGAGGCGGCGCCAAGG-ACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCT 272
                              **   *** **** * * * ****   ***  ** *    *  *  ***  **

consensus_11707#1      CCTCCAGTGATGCGGATGACCAGGCGGAAGCCTTGCCCTTCCTCGAGAGTGATAG--CCA 346
consensus_11707#2      CCTCCAGTGATGCGGATGACCAGGGTGACTNTTGNCCTTTCCTTGAGAGTTATAG--CCA 328
consensus_11707#0      CCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCA 332
                       **     * * ** ** **       *     *     *       ****  * *   **

consensus_11707#1      TCATACGCAAACAAGTAA-ACATGG-T------GAGAGTGGTGGGAGCAACTCTGGTGGA 398
consensus_11707#2      TCATACGTAAACAAGTAA-ACATGGGT------GAGAGTT-------------------- 361
consensus_11707#0      ACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGA 392
                        *  *     *****  * *** *           *  *                     

consensus_11707#1      TCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTT 458
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      TCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCC 452
                                                                                   

consensus_11707#1      CATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCT 518
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      CATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCT 512
                                                                                   

consensus_11707#1      CATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCT 578
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      CATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCG 572
                                                                                   

consensus_11707#1      CTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCC 638
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      CTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCA 632
                                                                                   

consensus_11707#1      ATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGA 698
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      ATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGA 692
                                                                                   

consensus_11707#1      TGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCT 758
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      TGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAA 752
                                                                                   

consensus_11707#1      GACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCAT 818
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      GATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAA 812
                                                                                   

consensus_11707#1      CAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGA 878
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      CAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGA 872
                                                                                   

consensus_11707#1      GGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAG 938
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      GGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAG 932
                                                                                   

consensus_11707#1      ATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCT 998
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      ATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCA 992
                                                                                   

consensus_11707#1      TTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGAT 1058
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      CTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGAC 1052
                                                                                   

consensus_11707#1      AGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCC 1118
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      AGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCA 1112
                                                                                   

consensus_11707#1      TTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATA 1178
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      TTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATA 1172
                                                                                   

consensus_11707#1      TTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATT 1238
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      ATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAG-TGAGATTGCAAATGCTGGCAA 1231
                                                                                   

consensus_11707#1      CATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAAT 1298
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      TTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAAT 1291
                                                                                   

consensus_11707#1      TTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAA 1358
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      GTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTG 1351
                                                                                   

consensus_11707#1      GGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCA 1418
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      GTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGG 1411
                                                                                   

consensus_11707#1      ATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAAT 1478
consensus_11707#2      ------------------------------------------------------------
consensus_11707#0      CCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCC 1471
                                                                                   

consensus_11707#1      ATCCAAAAATGGTTTGACAATTGAGATTATGCA---------------- 1511
consensus_11707#2      -------------------------------------------------
consensus_11707#0      CTCATATTGGGATGCAATTTTGACCGTTAAGCATCAACATGGCTCATTT 1520