|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11708#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2744 fasta sequence
[CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAGCCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAGATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCGAGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAATTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTAAAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCAGATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTTATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATGGTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATTGAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAGAAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCCGAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTCGGTGGTTTTAGCTCCAAGTATGGTTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTGTGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCCTTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT]
[+] EMBL AK101037 [CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAGCCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAGATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCGAGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAATTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTAAAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCAGATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTTATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATGGTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATTGAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAGAAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCCGAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTCGGTGGTTTTAGCTCCAAGTATGGTTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTGTGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCCTTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT]
[+] EMBL AK101757 [CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAGCCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAGATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCGAGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAATTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTAAAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCAGATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTTATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATGGTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATTGAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAGAAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCCGAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTCGGTGGTTTTAGCTCCAAGTATGGTTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTGTGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCCTTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT]
[+] EMBL CB638992 [ CGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGTAT CTCTTTTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAA ]
[+] EMBL CF323875 [ TTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAG ]
[+] EMBL CF322601 [ TTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAG ]
[+] EMBL CB645277 [ CAGCCTTGACAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCCTCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAAC ]
[-] EMBL CB645278 [ AGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTTTCAAG ]
[-] EMBL CB669114 [ TATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTGTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTA ]
consensusID : consensus_11708#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 808 fasta sequence
[GACGAGACAAGGGGGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATNGGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCANTGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGNCAATGTTGTCAACATTGATACACGGGACTGCACCTGCAGAAAGNGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGNGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGNTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGCGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGNAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGNTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGNTGNGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGNAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGNGTGAGACATAATCTTATTCCGGNGGTTNTAGCTCCAAGTATGGGTTTGCCTAACACTAGCGGGTACT]
[+] EMBL CA764865 [GACGAGACAAGGGGGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATNGGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCANTGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGNCAATGTTGTCAACATTGATACACGGGACTGCACCTGCAGAAAGNGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGNGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGNTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGCGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGNAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGNTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGNTGNGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGNAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGNGTGAGACATAATCTTATTCCGGNGGTTNTAGCTCCAAGTATGGGTTTGCCTAACACTAGCGGGTACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11708#0 CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAG 60
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 CCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGC 120
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 TCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGC 180
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAG 240
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 CTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCT 300
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGT 360
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAG 420
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 ATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCG 480
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAA 540
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 TTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTA 600
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCA 660
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGT 720
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 CAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACAT 780
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCT 840
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATT 900
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCG 960
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 TCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGG 1020
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 CCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAA 1080
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGC 1140
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACA 1200
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAA 1260
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAAC 1320
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTT 1380
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTA 1440
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTG 1500
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 TTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTT 1560
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 ATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATG 1620
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATT 1680
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAG 1740
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 AAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCC 1800
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 GAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGAT 1860
consensus_11708#1 --------------GACGAGACAAGGGGGATATGAGCTCTCAGTAGTGCAGTTGGTTGAT 46
* * * * ********************************
consensus_11708#0 ACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGG 1920
consensus_11708#1 ACAATNGGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGG 106
***** *****************************************************
consensus_11708#0 ACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTT 1980
consensus_11708#1 ACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTT 166
************************************************************
consensus_11708#0 ACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGC 2040
consensus_11708#1 ACACACAGTGTTGTTTGCTCAACAGGCANTGACGGAAACAATAATGTGTTTGAGGTATGC 226
**************************** *******************************
consensus_11708#0 GATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCAT 2100
consensus_11708#1 GATGGCGCTGNCAATGTTGTCAACATTGATACACGGGACTGCACCTGCAGAAAGNGGCAT 286
********** ********************** ******************** *****
consensus_11708#0 GTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCA 2160
consensus_11708#1 GTCTCTGGGATCCCATGCTCACATGCAATTGCGGNGTTTGAGCGCACTGATCATAACCCA 346
********************************** *************************
consensus_11708#0 CTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCA 2220
consensus_11708#1 CTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCA 406
************************************************************
consensus_11708#0 ATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAG 2280
consensus_11708#1 ATCAATCCAATACCTGACATTGNTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGCG 466
********************** *********************************** *
consensus_11708#0 GCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCA 2340
consensus_11708#1 GCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGNAAGACCAAAGGAAAAGCCA 526
**************************************** *******************
consensus_11708#0 GCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGG 2400
consensus_11708#1 GCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGNTTATGGG 586
**************************************************** *******
consensus_11708#0 CACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCA 2460
consensus_11708#1 CACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCA 646
************************************************************
consensus_11708#0 AGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAA-CCTG 2519
consensus_11708#1 AGTGTAAATTATGNTGNGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGNAACCTG 706
************* ** ************************************ * ****
consensus_11708#0 TGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTC-GGTGG 2578
consensus_11708#1 TGCAATGCCATCATGTATCTTTTATCAGATAACGNGTGAGACATAATCTTATTCCGGNGG 766
********************************** **** ************** ** **
consensus_11708#0 TTTTAGCTCCAAGTATGG-TTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTG 2637
consensus_11708#1 TTNTAGCTCCAAGTATGGGTTTGCCTAACACTAGCGGGTACT------------------ 808
** *************** ******** ******* ******
consensus_11708#0 TGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCC 2697
consensus_11708#1 ------------------------------------------------------------
consensus_11708#0 TTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT 2744
consensus_11708#1 -----------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||