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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11719#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3653 fasta sequence
[CGAGGCGGCGAGCGGAGCGAAGCGCCGGTGGCCGGCGGCGCAGCGACCCGCGGAGGAGCGAGGCGGACGTGCGGCGGCGCATCGAGAGGAGCAGGTGGCTGCGGAGGCGCGACCGGCATAGGGAGCCCCGCTGGAGAGGGGTCAGCGGCGCGGGTGCGTGTCATCCGTCGGCCGCGTCTCCATCTCGGATCGCCGGAGAGGGAGGAGGGGTGGGGGTGGTACAGGAGGAGAGAGACGGGCACCTAGGAGGAGCTTCACCGGTTTCTATCAAGTAAGCTTGTTGTATGAGTGAGGTTACAGAACACAATGTCCAGCAATAGCGGGGGTAGCGCGAAGGAGAAAGATCCTGAAAATGCTCCGGAGCTTGTGGCACTGCCGTTGGTCCGGACCCTGAGGCCTGTTCATGCAGTGATTGATCCTGCCGCTGACCCGAGATCAGCACAGCTGTCTTGGCCGGGCCATGTAGTCCTCCTGCCTCCATATGCAACATGGCCTCATCATGTGCCGACCCTGCCACCAGCGGTGAATCCTGCAAATCCACAACAAAACGTGGATGTGGCGGCGGCTGATGTTAGTCCTGACGTTGGTTGTTGTGATGAGAAGATGTTGCCAAAGGTAGATATGCTGTTTGATGGCGAAAAAGAGGCATACGATTTCTACAATGCGTATGCAGAGATGGTGGGCTTCTTTGTCCGGAGATCAACACTCTGGACAACGTCAAAGAACATAATCACTAGGAGAACTTTTGTCTGCTCGAGAGAAGGTTTTCGGGAGAAGAAGAGGGGCACCAAAGAAGCAAAGTGCCCGCGGCCTGAAACAAGAATTGGGTGCCCTGCGAGCATGACCATTAGACTTAATACCAACGGCAAGTACCGTTTGACAGAGTTTGTACCAAACCATAACCATCAACTTGCAACAGCATCTACAATGCATATGCTGAAGGCTAAGAAAATCAGGCTTAAAGCACGGGCTGCGAGAGAAAATCTGGTTGATGATACTGTGAGGACGCCAGGATTTGGGAGTGAAGATGAGGCATATGAATTTTACAGCATGTATGCTGGGAAAATTGGTTTCAATGTGAGAAGGGCAAGCATGACTATGAATGCTGAAAATGTCATCACAAGAAGGATGTTTGTTTGTTCAAAAGAAGGTTTCCGTGAGAAGAAAAGAGGGGCAAAAAGAGTAAAGAAGCCTCGCCCAGAGACCCGAACTGGTTGTCCAGCGTGTATGGTCATTAGACTTACATCTAATGGCAAATATCATGTAACAGAATTTGTTACCTTCCATAATCACCAGCTTGGTGCAACAGTACCTTCTGATCTTGTGGCAACATCACAAAGTACAGAAACTGGTCAAGATGATGGACTGGATTTGGTTGATGGTTCAGCTGATGCTAATATCCACAGGCAAAATCTTATAATTGGAAATATCATGGCAACATCTCTAGAAGGTAGAAGTAACAAAAGATTCAAGTGTACAAAGGTTCCTCACTATGGTGATGTAGGTGCTACTCTAGAGTACCTGCAAAAGATGCAACATGATAACCCTTCATTCTTCTTTGCAGTAAAATCTGATGATGATGGGAACTTGACAAACTTTCTATGGTCAGATTCAAAGTCTATCATGGATTTTGTCCACTTTGGTGATGTGGTATGTCTTGATTCAACGTATGCATTGCAGGGCTATGGTAGGCCACTTGCTTTATTTACGGGTGTGAATCATCACAAGCAAACTGTTATCTTTGCTGCTGCATTGCTTTATGACGAAAGTGTGGAGGCTTTCAGATGGTTGTTTGATACTTTTAAGATGGCAATGAATGGAACTCAGCCCAAAACATTGTTAACTGATAGATCTGATGCAATAAGTGAAGGTGTTGCAGCAAGTTGGCCTGCGACA-CCCATCGTTATTGTGTCTGGCAAATTTACCAAAACGCTCTTCAGCAGTTGAGTCAAGCATTTCATGGGTCAAAAACCTTAGATTACTGCTTCCAGAAATGCCTATTTGACTCTGAAGATGAGCCTGAGTTTTTGACAGCATGGAGAGAAATGTTGGAAAAGTATGACCTAGAAGATAATCAATGGCTAGCAGATTTGTTCTCTCTTAAGGAGAAATGGGCACTACCATATGGCCGCGAGGCATTTTGTGCTGATATGAAAAGTGTCCAGCAGAAGGAGAGCTTGGGCACTGAGCTTAAGAAACACTTATCCCTAGAATTTGACCTTTTGAGTTTCTT-CAAGCAGTTTGAAAGAGTATTGTGTGACCGCCGATCAACAGAATTGCAGGCTGATGTGGATGCTAGTCAGAGTACCAAGAAGCCACCACCTATGCGAGTGTTAAGGCAAGCTTCCAATATATATACACCTGCTGCCTTTAAAATGTTCGAGAGGGAGTTTGAGTTATACATGGATTGCATGTTATACAACTGTGGTGAGATGGGCACAATTTCTGAGTATAGGGTAGTCATTGAGGACAATCCAAAAGATCATTTTGTTAAATTTGATTCGCTTAATTCCATGGTAAACTGTAGCTGTAAAGGGTTTGAATTCGTAGGCATTCCATGCCGCCATATGCTAAAGGTACTTGACACCAGGAATATCAAGGACATTCCTCCTCAATACTTCTTGAAAAGGTGGAGAAAGGATGCTAAATCAGGATCTCCAAACTGTAGTTATTCATTCCCACTTGATGGTGATCCTCAGTTGGTTCAAACAAAACGTTATAA-CTTGCTGTGTCGGATGTTCAGCATAG-CAGCAGCT-A-GGGCTGCAA-CCTCTATAGAAACTTTTGCATATATGGAAAA-CCAATCAAGCATATTTATGGACCAAGTAGAACAAGCTCTTCAAACAAGGCCCCCAGACATCGCTG-CCATGATTGGGGCTCATTGTGATCAAACACAAAATCCAATTGACAATATCGTCGCAGGAGGTCTACACAGCCATACTAATTTCATCAATGGCCCTGCTGATGGTTCCCTAACCTTTCCATTTACATTGGGTGCTGGTGTGTTGGATTACCGCTAGATAGTGACTAATTTCTTACAAGTACTAGCCACAAGGAGCTGCGAATTCTGTACAGTGATCTTTTCGTGGAAATGCATTTTATATATCACCAGAAAATTCCAGGTTATGTCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCATCTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCATTGTACATGTAATTTTCAGATAAAGTTTAGAGAATGATGAAAAGTTTCCATCGGTGTATTTACTGAAACAATATTAGAAAATCCATTTGGTCACTTATTAGTTGTTATTACTAACTAATAGTCATTTCAACTCAACAAAAAAAGTCTGTAGCCTTTAAGTTGTCTCCTGCAGTCATTCCTGTTTAGAGGAAGNTGGCAATCTATCTTCTGTCAGTGTGGTGGGATGTCGAGTGATGAATTTGGGGTTCCTCAAGTGAGAAGAATTGCTTTGGTGACTGATGGGCTCCTTACTAGTGATACGTATGGTGCAGCGAAGCCGGATAGGATGTAACAGGTTCAATTTTGATGNACATATGATGGCGAACCAGTATTTTGATCACCTANAGTAAACTGGTTGATT]
[+] EMBL AK067575 [CGAGGCGGCGAGCGGAGCGAAGCGCCGGTGGCCGGCGGCGCAGCGACCCGCGGAGGAGCGAGGCGGACGTGCGGCGGCGCATCGAGAGGAGCAGGTGGCTGCGGAGGCGCGACCGGCATAGGGAGCCCCGCTGGAGAGGGGTCAGCGGCGCGGGTGCGTGTCATCCGTCGGCCGCGTCTCCATCTCGGATCGCCGGAGAGGGAGGAGGGGTGGGGGTGGTACAGGAGGAGAGAGACGGGCACCTAGGAGGAGCTTCACCGGTTTCTATCAAGTAAGCTTGTTGTATGAGTGAGGTTACAGAACACAATGTCCAGCAATAGCGGGGGTAGCGCGAAGGAGAAAGATCCTGAAAATGCTCCGGAGCTTGTGGCACTGCCGTTGGTCCGGACCCTGAGGCCTGTTCATGCAGTGATTGATCCTGCCGCTGACCCGAGATCAGCACAGCTGTCTTGGCCGGGCCATGTAGTCCTCCTGCCTCCATATGCAACATGGCCTCATCATGTGCCGACCCTGCCACCAGCGGTGAATCCTGCAAATCCACAACAAAACGTGGATGTGGCGGCGGCTGATGTTAGTCCTGACGTTGGTTGTTGTGATGAGAAGATGTTGCCAAAGGTAGATATGCTGTTTGATGGCGAAAAAGAGGCATACGATTTCTACAATGCGTATGCAGAGATGGTGGGCTTCTTTGTCCGGAGATCAACACTCTGGACAACGTCAAAGAACATAATCACTAGGAGAACTTTTGTCTGCTCGAGAGAAGGTTTTCGGGAGAAGAAGAGGGGCACCAAAGAAGCAAAGTGCCCGCGGCCTGAAACAAGAATTGGGTGCCCTGCGAGCATGACCATTAGACTTAATACCAACGGCAAGTACCGTTTGACAGAGTTTGTACCAAACCATAACCATCAACTTGCAACAGCATCTACAATGCATATGCTGAAGGCTAAGAAAATCAGGCTTAAAGCACGGGCTGCGAGAGAAAATCTGGTTGATGATACTGTGAGGACGCCAGGATTTGGGAGTGAAGATGAGGCATATGAATTTTACAGCATGTATGCTGGGAAAATTGGTTTCAATGTGAGAAGGGCAAGCATGACTATGAATGCTGAAAATGTCATCACAAGAAGGATGTTTGTTTGTTCAAAAGAAGGTTTCCGTGAGAAGAAAAGAGGGGCAAAAAGAGTAAAGAAGCCTCGCCCAGAGACCCGAACTGGTTGTCCAGCGTGTATGGTCATTAGACTTACATCTAATGGCAAATATCATGTAACAGAATTTGTTACCTTCCATAATCACCAGCTTGGTGCAACAGTACCTTCTGATCTTGTGGCAACATCACAAAGTACAGAAACTGGTCAAGATGATGGACTGGATTTGGTTGATGGTTCAGCTGATGCTAATATCCACAGGCAAAATCTTATAATTGGAAATATCATGGCAACATCTCTAGAAGGTAGAAGTAACAAAAGATTCAAGTGTACAAAGGTTCCTCACTATGGTGATGTAGGTGCTACTCTAGAGTACCTGCAAAAGATGCAACATGATAACCCTTCATTCTTCTTTGCAGTAAAATCTGATGATGATGGGAACTTGACAAACTTTCTATGGTCAGATTCAAAGTCTATCATGGATTTTGTCCACTTTGGTGATGTGGTATGTCTTGATTCAACGTATGCATTGCAGGGCTATGGTAGGCCACTTGCTTTATTTACGGGTGTGAATCATCACAAGCAAACTGTTATCTTTGCTGCTGCATTGCTTTATGACGAAAGTGTGGAGGCTTTCAGATGGTTGTTTGATACTTTTAAGATGGCAATGAATGGAACTCAGCCCAAAACATTGTTAACTGATAGATCTGATGCAATAAGTGAAGGTGTTGCAGCAAGTTGGCCTGCGACAGCCCATCGTTATTGTGTCTGGCAAATTTACCAAAACGCTCTTCAGCAGTTGAGTCAAGCATTTCATGGGTCAAAAACCTTAGATTACTGCTTCCAGAAATGCCTATTTGACTCTGAAGATGAGCCTGAGTTTTTGACAGCATGGAGAGAAATGTTGGAAAAGTATGACCTAGAAGATAATCAATGGCTAGCAGATTTGTTCTCTCTTAAGGAGAAATGGGCACTACCATATGGCCGCGAGGCATTTTGTGCTGATATGAAAAGTGTCCAGCAGAAGGAGAGCTTGGGCACTGAGCTTAAGAAACACTTATCCCTAGAATTTGACCTTTTGAGTTTCTT CAAGCAGTTTGAAAGAGTATTGTGTGACCGCCGATCAACAGAATTGCAGGCTGATGTGGATGCTAGTCAGAGTATAAAGAAGCCACCACCTATGCGAGTGTTAAGGCAAGCTTCCAATATATATACACCTGCTGCCTTTAAAATGTTCGAGAGGGAGTTTGAGTTATACATGGATTGCATGTTATACAACTGTGGTGAGATGGGCACAATTTCTGAGTATAGGGTAGTCATTGAGGACAATCCAAAAGATCATTTTGTTAAATTTGATTCGCTTAATTCCATGGTAAACTGTAGCTGTAAAGGGTTTGAATTCGTAGGCATTCCATGCCGCCATATGCTAAAGGTACTTGACACCAGGAATATCAAGGACATTCCTCCTCAATACTTCTTGAAAAGGTGGAGAAAGGATGCTAAATCAGGATCTCCAAACTGTAGTTATTCATTCCCACTTGATGGTGATCCTCAGTTGGTTCAAACAAAACGTTATAA CTTGCTGTGTCGGATGTTCAGCATAG CAGCAGCT A GGGCTGCAA CCTCTATAGAAACTTTTGCATATATGGAAAA CCAATCAAGCATATTTATGGACCAAGTAGAACAAGCTCTTCAAACAAGGCCCCCAGACATCGCTG CCATGATTGGGGCTCATTGTGATCAAACACAAAATCCAATTGACAATATCGTCGCAGGAGGTCTACACAGCCATACTAATTTCATCAATGGCCCTGCTGATGGTTCCCTAACCTTTCCATTTACATTGGGTGCTGGTGTGTTGGATTACCGCTAGATAGTGACTAATTTCTTACAAGTACTAGCCACAAGGAGCTGCGAATTCTGTACAGTGATCTTTTCGTGGAAATGCATTTTATATATCACCAGAAAATTCCAGGTTATGTCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCATCTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCATTGTACATGTAATTTTCAGATAAAGTTTAGAGAATGATGAAAAGTTTCCATCGGTGTATTTACTGAAACAATATTAGAAAAT ]
[+] EMBL AF140493 [ TAACCATCAACTTGCAACAGCATCTACAATGCGTATGCTGAAGGCTAAGAAAATCAGGCTTAAAGCACGGGCTGCGAGAGAAAATCTGGTTGATGATACTGTGAGGACGCCAGAATTTGGGAGTGAAGATGAGGCATATGAATTTTACAGCATGTATGCTGGGAAAATTGGTTTCAATGTGAGAAGGGCAAGCATGACTATGAATGCTGAAAATGTCATCACAAGAAGGATGTTTGTTTGTTCAAAAGAAGGTTTCCGTGAGAAGAAAAGAGGGGCAAAAAGAGTAAAGAAGCCTCGCCCAGAGACCCGAACTGGTTGTCCAGCGTGTATGGTCATTAGACTTACATCTAATGGCAAATATCATGTAACAGAATTTGTTACCTTCCATAATCACCAGCTTG ]
[+] EMBL AU063948 [ TGGCCTGCGACA CCCATCGTTATTGTGTCTGGCAAATTTACCAAAACGCTCTTCAGCAGTTGAGTCAAGCATTTCATGGGTCAAAAACCTTAGATTACTGCTTCCAGAAATGCCTATTTGACTCTGAAGATGAGCCTGAGTTTTTGACAGCATGGAGAGAAATGTTGGAAAAGTATGACCTAGAAGATAATCAATGGCTAGCAGATTTGTTCTCTCTTAAGGAGAAATGGGCACTACCATATGGCCGCGA GNATTTTGTGCTGATATGAAAAGTGTCCAGCAGAAGGAGAGCTTGGGCACTGAGCTTAAGAAACACTTATCCCTAGAATTTGACCTTTTGAGTNTCTT CAAGCAGTTTGAAAGAGTATTGTGTGACCGCCGATCAACAGAATTGCAGGCTGATGTGGATGCTAGTCAGAGTACCAAGAAGCCACCACCTATGCG ]
[+] EMBL AU063937 [ TGGCCTGCGACA CCCATCGTTATTGTGTCTGGCAAATTTACCAAAACGCTCTTCAGCAGTTGAGTCAAGCATTTCATGGGTCAAAAACCTTAGATTACTGCTTCCAGAAATGCCTATTTGACTCTGAAGATGAGCCTGAGTTTTTGACAGCATGGAGAGAAATGTTGGAAAAGTATGACCTAGAAGATAATCAATGGCTAGCAGATTTGTTCTCTCTTAAGGAGAAATGGGCACTACCATATGGCCGCGAGG ATTTTGTGCTGATATGAAAAGTGTCCAGCAGAAGGAGAGCTTGGGCACTGAGCTTAAGAAACACTTATCCCTAGAATTTGACCTTTTGAGTTTCTTCCAAGCAGTTTGAAAGAGTATTGTGTGACCGCCGATCAACAGAATTGCAGGCTGATGTGGATCCAAGCCAGAGT CCAAGAAGCC CCNCCTATG ]
[+] EMBL AU085882 [ caAAAACGTTATAANCTTGCTGTGNCGGATGTTCAGCATAGCCAGCAGCT AGGGGTTGCAACCCNCTATAGAAACTTTTGCATATATGGAAAACCCAATCAAGCATATTTATGGACCAAGTAGAACAAGCTCTTCAAACAAGGCCCCCAGACATCGCTGCCCATGATTGGGGCTCATTGTGATCAAACACAAAATCCAATTGACAATATCGTCGCAGGAGGTCTACACAGCCATACTAATTTCATCAATGGCCCTGCTGATGGTTCCCTAACCTTTCCATTTACATTGGGTGCTGGTGTGTTGGATTACCGCTAGATAGTGACTAATTTCTTACAAGTACTAGCCACAAGGAGCTGCGAATTCTGTACAGTGATCTTTTCGTGGAAATGCATTTTATATATCACCAGAAAATTCCAGGTTATGTCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCATCTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCATTGTACATGTAATTTTCAGATAAAGTTTAGAGAATGATGAAAAGTTTCCATCGGTGTATTTACTGAAACAATATTAGAAAATCCATTTGGTCACTTATTAGTTGTTATTACTAACTAATAGTCATTTCAACTCAACAAAAA ]
[+] EMBL AU085893 [ GTCGNATGTTCAGCATAG CAGCAGCTNA GGGCTGCAA CCTCTATAGAAACTTTTGCATATATGGAAAC CCAATCAAGCATATTTATGGACCAAGTAGAACAAGCTNTTCAAACAAGGCCCCCAGACATCGCTG CCATGATTGGGGCTCATTGTGATCAAACACAAAATCCAATTGACAATATCGTCGCAGGAGGTCTACACAGCCATACTAATTTCATCAATGGCCCTGCTGATGGTTCCCTAACCTTTCCATTTACATTGGGTGCTGGTGTGTTGGATTACCGCTAGATAGTGACTAATTTCTTACAAGTACTAGCCACAAGGAGCTGCGAATTCTGTACAGTGATCTTTTCGTGGAAATGCATTTTATATATCACCAGAAAATTCCAGGTTATGTCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCATCTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCATTGTACATGTAATTTTCAGATAAAGTTTAGAGAATGATGAAAAGTTTCCATCGGTGTATTTACTGAAACAATATTAGAAAATCCATTTGGTCACTTATTAGTTGTTATTACTAACTAATAGTCATTTCAACTCAACAAAAA ]
[+] EMBL CA764156 [ AACCTTTCCATTTACATTGGGTGCTGGTGTGTTGGATTACCGCTAGATAGTGACTAATTTCTTACAAGTACTAGCCACAAGGAGCTGCGAATTCTGTACAGTGATCTTTTCGTGGAAATGCATTTTATATATCACCAGAAAATTCCAGGTTATGTCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCATCTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCATTGTACATGTAATTTTCAGATAAAGTTTAGAGAATGATGAAAAGTTTCCATCGGTGTATTTACTGAAACAATATTAGAAAATCCATTTGGTCACTTATTAGTTGTTATTACTAACTAATAGTCATTTCAACTCAACAACAAAAGTCTGTAGCCTTTAAGTTGTCTCCTGCAGTCATTCCTGTTTAGAGGAAGNTGGCAATCTATCTTCTGTCAGTGTGGTGGGATGTCGAGTGATGAATTTGGGGTTCCTCAAGTGAGAAGAATTGCTTTGGTGACTGATGGGCTCCTTACTAGTGATACGTATGGTGCAGCGAAGCCGGATAGGATGTAACAGGTTCAATTTTGATGNACATATGATGGCGAACCAGTATTTTGATCACCTANAGTAAACTGGTTGATT]
consensusID : consensus_11719#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 518 fasta sequence
[CCACGGTTATGTCCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCATCTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCATTGTACATGTAATTTTCCATCGGTGTATTTACTGAA-ACAATATTAGAAAATCCA-TTTGGTCACTTATTAGTTGTTATTACTAACTAATAGTCATTTCAACTCAACAACAAAAGTCTGTAGCCTTTAAGTTGTCTCCTGCAGTCATTCCTGTTTAGAGGAAGTTGGCAATCTATCTTCTGTCAGTGTGGTGGAATGTCGAGTGATGAATTTGGGGTTCCTCAAGTGAGAAGAATTGCTTTGGTGACTGATGGGCTCCTTACTAGTGATACGTATGGTGCAGCGAAGCCGGATAGGATGTAACAGTTTCAATTTTGATGTACATATGATGTCGAATCAGTATTTTGATCA-CCTAGAGTAAACTGTTTGATTAAAAAAAAA]
[+] EMBL BI812162 [CCACGGTTATGTCCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCATCTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCATTGTACATGTAATTTTCCATCGGTGTATTTACTGAA ACAATATTAGAAAATCCA TTTGGTCACTTATTAGTTGTTATTACTAACTAATAGTCATTTCAACTCAACAACAAAAGTCTGTAGCCTTTAAGTTGTCTCCTGCAGTCATTCCTGTTTAGAGGAAGTTGGCAATCTATCTTCTGTCAGTGTGGTGGAATGTCGAGTGATGAATTTGGGGTTCCTCAAGTGAGAAGAATTGCTTTGGTGACTGATGGGCTCCTTACTAGTGATACGTATGGTGCAGCGAAGCCGGATAGGATGTAACAGTTTCAATTTTGATGTACATATGATGTCGAATCAGTATTTTGATCA CCTAGAGTAAACTGTTTGATTAAAAAAAAA]
[-] EMBL BU667166 [ GCTTACACATTATACCGTAGAGCTGAGAATAGTGATGGCTAGCCCATCCCTTGTACATGTAATTTTCCATCGGTGTATTTACTGAATACAATATTAGAAAATCCACTTTGGTCACTTATTAGTTGTTATTACTAACTAATAGTCATTTCAACTCAAC ACCAAAGTCTGTAGCCTTTAAGTTGTCTCCTGCAGTCATTCCTGTTTAGAGGAAGTTGGCAATCTATCTTCTGTCAGTGTGGTGGAATGTCGAGTGATGAATTTGGGGTTCCTCAAGTGAGAAGAATTGCTTTGGTGACTGATGGGCTCCTTACTAGTGATACGTATGGTGCAGCGAAGCCGGATAGGATGTAACAGTTTCAATTTTGATGTACATATGATGTCGAATCAGTATTTTGATCACCCTAGAGTAAACTGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11719#0 CGAGGCGGCGAGCGGAGCGAAGCGCCGGTGGCCGGCGGCGCAGCGACCCGCGGAGGAGCG 60
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AGGCGGACGTGCGGCGGCGCATCGAGAGGAGCAGGTGGCTGCGGAGGCGCGACCGGCATA 120
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GGGAGCCCCGCTGGAGAGGGGTCAGCGGCGCGGGTGCGTGTCATCCGTCGGCCGCGTCTC 180
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 CATCTCGGATCGCCGGAGAGGGAGGAGGGGTGGGGGTGGTACAGGAGGAGAGAGACGGGC 240
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ACCTAGGAGGAGCTTCACCGGTTTCTATCAAGTAAGCTTGTTGTATGAGTGAGGTTACAG 300
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AACACAATGTCCAGCAATAGCGGGGGTAGCGCGAAGGAGAAAGATCCTGAAAATGCTCCG 360
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GAGCTTGTGGCACTGCCGTTGGTCCGGACCCTGAGGCCTGTTCATGCAGTGATTGATCCT 420
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GCCGCTGACCCGAGATCAGCACAGCTGTCTTGGCCGGGCCATGTAGTCCTCCTGCCTCCA 480
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TATGCAACATGGCCTCATCATGTGCCGACCCTGCCACCAGCGGTGAATCCTGCAAATCCA 540
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 CAACAAAACGTGGATGTGGCGGCGGCTGATGTTAGTCCTGACGTTGGTTGTTGTGATGAG 600
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AAGATGTTGCCAAAGGTAGATATGCTGTTTGATGGCGAAAAAGAGGCATACGATTTCTAC 660
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AATGCGTATGCAGAGATGGTGGGCTTCTTTGTCCGGAGATCAACACTCTGGACAACGTCA 720
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AAGAACATAATCACTAGGAGAACTTTTGTCTGCTCGAGAGAAGGTTTTCGGGAGAAGAAG 780
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AGGGGCACCAAAGAAGCAAAGTGCCCGCGGCCTGAAACAAGAATTGGGTGCCCTGCGAGC 840
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ATGACCATTAGACTTAATACCAACGGCAAGTACCGTTTGACAGAGTTTGTACCAAACCAT 900
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AACCATCAACTTGCAACAGCATCTACAATGCATATGCTGAAGGCTAAGAAAATCAGGCTT 960
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AAAGCACGGGCTGCGAGAGAAAATCTGGTTGATGATACTGTGAGGACGCCAGGATTTGGG 1020
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AGTGAAGATGAGGCATATGAATTTTACAGCATGTATGCTGGGAAAATTGGTTTCAATGTG 1080
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AGAAGGGCAAGCATGACTATGAATGCTGAAAATGTCATCACAAGAAGGATGTTTGTTTGT 1140
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TCAAAAGAAGGTTTCCGTGAGAAGAAAAGAGGGGCAAAAAGAGTAAAGAAGCCTCGCCCA 1200
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GAGACCCGAACTGGTTGTCCAGCGTGTATGGTCATTAGACTTACATCTAATGGCAAATAT 1260
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 CATGTAACAGAATTTGTTACCTTCCATAATCACCAGCTTGGTGCAACAGTACCTTCTGAT 1320
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 CTTGTGGCAACATCACAAAGTACAGAAACTGGTCAAGATGATGGACTGGATTTGGTTGAT 1380
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GGTTCAGCTGATGCTAATATCCACAGGCAAAATCTTATAATTGGAAATATCATGGCAACA 1440
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TCTCTAGAAGGTAGAAGTAACAAAAGATTCAAGTGTACAAAGGTTCCTCACTATGGTGAT 1500
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GTAGGTGCTACTCTAGAGTACCTGCAAAAGATGCAACATGATAACCCTTCATTCTTCTTT 1560
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GCAGTAAAATCTGATGATGATGGGAACTTGACAAACTTTCTATGGTCAGATTCAAAGTCT 1620
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ATCATGGATTTTGTCCACTTTGGTGATGTGGTATGTCTTGATTCAACGTATGCATTGCAG 1680
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GGCTATGGTAGGCCACTTGCTTTATTTACGGGTGTGAATCATCACAAGCAAACTGTTATC 1740
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TTTGCTGCTGCATTGCTTTATGACGAAAGTGTGGAGGCTTTCAGATGGTTGTTTGATACT 1800
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TTTAAGATGGCAATGAATGGAACTCAGCCCAAAACATTGTTAACTGATAGATCTGATGCA 1860
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ATAAGTGAAGGTGTTGCAGCAAGTTGGCCTGCGACACCCATCGTTATTGTGTCTGGCAAA 1920
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TTTACCAAAACGCTCTTCAGCAGTTGAGTCAAGCATTTCATGGGTCAAAAACCTTAGATT 1980
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ACTGCTTCCAGAAATGCCTATTTGACTCTGAAGATGAGCCTGAGTTTTTGACAGCATGGA 2040
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GAGAAATGTTGGAAAAGTATGACCTAGAAGATAATCAATGGCTAGCAGATTTGTTCTCTC 2100
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TTAAGGAGAAATGGGCACTACCATATGGCCGCGAGGCATTTTGTGCTGATATGAAAAGTG 2160
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TCCAGCAGAAGGAGAGCTTGGGCACTGAGCTTAAGAAACACTTATCCCTAGAATTTGACC 2220
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TTTTGAGTTTCTTCAAGCAGTTTGAAAGAGTATTGTGTGACCGCCGATCAACAGAATTGC 2280
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AGGCTGATGTGGATGCTAGTCAGAGTACCAAGAAGCCACCACCTATGCGAGTGTTAAGGC 2340
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AAGCTTCCAATATATATACACCTGCTGCCTTTAAAATGTTCGAGAGGGAGTTTGAGTTAT 2400
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ACATGGATTGCATGTTATACAACTGTGGTGAGATGGGCACAATTTCTGAGTATAGGGTAG 2460
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TCATTGAGGACAATCCAAAAGATCATTTTGTTAAATTTGATTCGCTTAATTCCATGGTAA 2520
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ACTGTAGCTGTAAAGGGTTTGAATTCGTAGGCATTCCATGCCGCCATATGCTAAAGGTAC 2580
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TTGACACCAGGAATATCAAGGACATTCCTCCTCAATACTTCTTGAAAAGGTGGAGAAAGG 2640
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ATGCTAAATCAGGATCTCCAAACTGTAGTTATTCATTCCCACTTGATGGTGATCCTCAGT 2700
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TGGTTCAAACAAAACGTTATAACTTGCTGTGTCGGATGTTCAGCATAGCAGCAGCTAGGG 2760
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 CTGCAACCTCTATAGAAACTTTTGCATATATGGAAAACCAATCAAGCATATTTATGGACC 2820
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AAGTAGAACAAGCTCTTCAAACAAGGCCCCCAGACATCGCTGCCATGATTGGGGCTCATT 2880
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 GTGATCAAACACAAAATCCAATTGACAATATCGTCGCAGGAGGTCTACACAGCCATACTA 2940
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 ATTTCATCAATGGCCCTGCTGATGGTTCCCTAACCTTTCCATTTACATTGGGTGCTGGTG 3000
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 TGTTGGATTACCGCTAGATAGTGACTAATTTCTTACAAGTACTAGCCACAAGGAGCTGCG 3060
consensus_11719#1 ------------------------------------------------------------
consensus_11719#0 AATTCTGTACAGTGATCTTTTCGTGGAAATGCATTTTATATATCACCAGAAAATTCCAGG 3120
consensus_11719#1 ------------------------------------------------------CCACGG 6
* **
consensus_11719#0 TTATGTCCC-TCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCAT 3179
consensus_11719#1 TTATGTCCCCTCTGCTGACCCACTTCCTCATCCAGGTGATTACATGGTAATATTGTGCAT 66
********* **************************************************
consensus_11719#0 CTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGAT 3239
consensus_11719#1 CTTGCTGGCTGGCAATTTGACAATGCTTACACATTATACCGTAGAGCTGAGAATAGTGAT 126
************************************************************
consensus_11719#0 GGCTAGCCCATCCATTGTACATGTAATTTTCAGATAAAGTTTAGAGAATGATGAAAAGTT 3299
consensus_11719#1 GGCTAGCCCATCCATTGTACATGTAATTTTC----------------------------- 157
*******************************
consensus_11719#0 TCCATCGGTGTATTTACTGAAACAATATTAGAAAATCCATTTGGTCACTTATTAGTTGTT 3359
consensus_11719#1 --CATCGGTGTATTTACTGAAACAATATTAGAAAATCCATTTGGTCACTTATTAGTTGTT 215
**********************************************************
consensus_11719#0 ATTACTAACTAATAGTCATTTCAACTCAACAAAAAAAGTCTGTAGCCTTTAAGTTGTCTC 3419
consensus_11719#1 ATTACTAACTAATAGTCATTTCAACTCAACAACAAAAGTCTGTAGCCTTTAAGTTGTCTC 275
******************************** ***************************
consensus_11719#0 CTGCAGTCATTCCTGTTTAGAGGAAGNTGGCAATCTATCTTCTGTCAGTGTGGTGGGATG 3479
consensus_11719#1 CTGCAGTCATTCCTGTTTAGAGGAAGTTGGCAATCTATCTTCTGTCAGTGTGGTGGAATG 335
************************** ***************************** ***
consensus_11719#0 TCGAGTGATGAATTTGGGGTTCCTCAAGTGAGAAGAATTGCTTTGGTGACTGATGGGCTC 3539
consensus_11719#1 TCGAGTGATGAATTTGGGGTTCCTCAAGTGAGAAGAATTGCTTTGGTGACTGATGGGCTC 395
************************************************************
consensus_11719#0 CTTACTAGTGATACGTATGGTGCAGCGAAGCCGGATAGGATGTAACAGGTTCAATTTTGA 3599
consensus_11719#1 CTTACTAGTGATACGTATGGTGCAGCGAAGCCGGATAGGATGTAACAGTTTCAATTTTGA 455
************************************************ ***********
consensus_11719#0 TGNACATATGATGGCGAACCAGTATTTTGATCACCTANAGTAAACTGGTTGATT------ 3653
consensus_11719#1 TGTACATATGATGTCGAATCAGTATTTTGATCACCTAGAGTAAACTGTTTGATTAAAAAA 515
** ********** **** ****************** ********* ******
consensus_11719#0 ---
consensus_11719#1 AAA 518
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||