cluster # 11726

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Oryza sativa
cluster # 11726 cluster # 11726 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11726#0 length = 1340 sequences # 9
consensusID : consensus_11726#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1340
fasta sequence
                              [GCCAATCCACCTCCTCCCTCCCCTCCACCTCGCCGCCGCCGCCGCCGCCGCATCTGCCGAAGGCGGGA-GCCG-TGAGGGGAAGGACCTGTGGCACGAGGTGGTGGCGGCATGGAGTTCCTGCAGGGGCAGAGCACGGAGACCGCCGTGGCCGTGGCGGTGGCCGTCGTCGCCGTGGCCGCCGGCGCCGCCTTCCTCCTCCTCCTCCTCCGCAGCAGCAAGAAGCCCAAGGGCTGCTTGGACCCTGAGAACTTCAAGGAGTTTAAGCTTGTGGAGAAGAGGCAGATCAGTCATAATGTGGCCAAGTTCAGATTTGCTCTACCAACCCCTGCTTCTGTGCTGGGGCTTCCAATTGGCCAACATATCAGTTGCAGAGGGCAGGATGCTAC-TGGCGAGGAAGTAATCAAGCCTTATACTCCAACTACGCTGGATTCTGATCTTGGACGGTTTGAGCTTGTTATTAAGATGTATCCCCAAGGAAGAATGTCTCATCATTTTCATGAGATGAAAGTTGGTGACTATTTATCTGTGAGAGGACCTAAGGGTCGCTTCAAATACCAACCTGGGCAAGTAAGAGCATTTGGAATGTTAGCTGGAGGATCAGGCATTACCCCAATGTTCCAAGTCACAAGA-GCAATTCTTGAAAACCCAAGTGA-CAATACGAAAGTGCACTTAATCTATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAATTGGATAGTATGGTTGAAACCTATCCCGATCGCTTCAAGATATACTATGTATTAAATCAGCCTCCAGAAATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGCCCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAAC-AAAGCCATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAA-CA-TTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACAGAATGAAACTAATTATTTTTTTTTCAATCAGAATTTTGGACACAAGGTTGGAACGTTCAAAAAAAAAGCTAACTCGTTGCTCAGGTGATTAAAGAATGACCAACTTGTACCATTTGATTATGAGAAGAAAAACAACTAC]

[+] EMBL AK071883             [GCCAATCCACCTCCTCCCTCCCCTCCACCTCGCCGCCGCCGCCGCCGCCGCATCTGCCGAAGGCGGGA GCCG TGAGGGGAAGGACCTGTGGCACGAGGTGGTGGCGGCATGGAGTTCCTGCAGGGGCAGAGCACGGAGACCGCCGTGGCCGTGGCGGTGGCCGTCGTCGCCGTGGCCGCCGGCGCCGCCTTCCTCCTCCTCCTCCTCCGCAGCAGCAAGAAGCCCAAGGGCTGCTTGGACCCTGAGAACTTCAAGGAGTTTAAGCTTGTGGAGAAGAGGCAGATCAGTCATAATGTGGCCAAGTTCAGATTTGCTCTACCAACCCCTGCTTCTGTGCTGGGGCTTCCAATTGGCCAACATATCAGTTGCAGAGGGCAGGATGCTAC TGGCGAGGAAGTAATCAAGCCTTATACTCCAACTACGCTGGATTCTGATCTTGGACGGTTTGAGCTTGTTATTAAGATGTATCCCCAAGGAAGAATGTCTCATCATTTTCATGAGATGAAAGTTGGTGACTATTTATCTGTGAGAGGACCTAAGGGTCGCTTCAAATACCAACCTGGGCAAGTAAGAGCATTTGGAATGTTAGCTGGAGGATCAGGCATTACCCCAATGTTCCAAGTCACAAGA GCAATTCTTGAAAACCCAAGTGA CAATACGAAAGTGCACTTAATCTATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAATTGGATAGTATGGTTGAAACCTATCCCGATCGCTTCAAGATATACTATGTATTAAATCAGCCTCCAGAAATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGCCCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAAC AAAGCCATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAA CA TTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACAGAATGAAACTAATTATTTTTTTTTCAATCAGAATTTTGGACACAAGGTTGGAACGTTCATTGCTCCAGCTAACTCGTTGCTCAGGTGATTAAAGAATGACCAACTTGTACCATTTGATTATGAGAAGAAAAACAACTAC]
[+] EMBL AK073699             [  CAATCCACCTCCTCCCTCCCCTCCACCTCGCCGCCGCCGCCGCCGCCGCATCTGCCGAAGGCGGGA GCCG TGAGGGGAAGGACCTGTGGCACGAGGTGGTGGCGGCATGGAGTTCCTGCAGGGGCAGAGCACGGAGACCGCCGTGGCCGTGGCGGTGGCCGTCGTCGCCGTGGCCGCCGGCGCCGCCTTCCTCCTCCTCCTCCTCCGCAGCAGCAAGAAGCCCAAGGGCTGCTTGGACCCTGAGAACTTCAAGGAGTTTAAGCTTGTGGAGAAGAGGCAGATCAGTCATAATGTGGCCAAGTTCAGATTTGCTCTACCAACCCCTGCTTCTGTGCTGGGGCTTCCAATTGGCCAACATATCAGTTGCAGAGGGCAGGATGCTAC TGGCGAGGAAGTAATCAAGCCTTATACTCCAACTACGCTGGATTCTGATCTTGGACGGTTTGAGCTTGTTATTAAGATGTATCCCCAAGGAAGAATGTCTCATCATTTTCATGAGATGAAAGTTGGTGACTATTTATCTGTGAGAGGACCTAAGGGTCGCTTCAAATACCAACCTGGGCAAGTAAGAGCATTTGGAATGTTAGCTGGAGGATCAGGCATTACCCCAATGTTCCAAGTCACAAGA GCAATTCTTGAAAACCCAAGTGA CAATACGAAAGTGCACTTAATCTATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAATTGGATAGTATGGTTGAAACCTATCCCGATCGCTTCAAGATATACTATGTATTAAATCAGCCTCCAGAAATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGCCCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAAC AAAGCCATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAA CA TTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACA                                                                                                                                           ]
[+] EMBL AK105459             [   AATCCACCTCCTCCCTCCCCTCCACCT   CGCCGCCGCCGCCGCCGCATCTGCCGAAGGCGGGA GCCG TGAGGGGAAGGACCTGTGGCACGAGGTGGTGGCGGCATGGAGTTCCTGCAGGGGCAGAGCACGGAGACCGCCGTGGCCGTGGCGGTGGCCGTCGTCGCCGTGGCCGCCGGCGCCGCCTTCCTCCTCCTCCTCCTCCGCAGCAGCAAGAAGCCCAAGGGCTGCTTGGACCCTGAGAACTTCAAGGAGTTTAAGCTTGTGGAGAAGAGGCAGATCAGTCATAATGTGGCCAAGTTCAGATTTGCTCTACCAACCCCTGCTTCTGTGCTGGGGCTTCCAATTGGCCAACATATCAGTTGCAGAGGGCAGGATGCTAC TGGCGAGGAAGTAATCAAGCCTTATACTCCAACTACGCTGGATTCTGATCTTGGACGGTTTGAGCTTGTTATTAAGATGTATCCCCAAGGAAGAATGTCTCATCATTTTCATGAGATGAAAGTTGGTGACTATTTATCTGTGAGAGGACCTAAGGGTCGCTTCAAATACCAACCTGGGCAAGTAAGAGCATTTGGAATGTTAGCTGGAGGATCAGGCATTACCCCAATGTTCCAAGTCACAAGA GCAATTCTTGAAAACCCAAGTGA CAATACGAAAGTGCACTTAATCTATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAATTGGATAGTATGGTTGAAACCTATCCCGATCGCTTCAAGATATACTATGTATTAAATCAGCCTCCAGAAATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGCCCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAAC AAAGCCATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAA CA TTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACAGAATGAAACTAATTATTTT                                                                                                                        ]
[+] EMBL OSR31491A            [                   CCCCTCCACCTCGCCGCCGCCGCCGCCGCCGCATCTGCCGAANG GNGANGCCGTTGANGGGAAGGACCTGTGGCACGAGGTNGTGGCGGCATGGAGTTCCTGCAGGGGCAGAGCACGGAGACCGCCGTGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU161508             [                                                                                                                             cgagAGAGCACGGAGACCGCCGTGGCCGTGGNGGTGGCCGTCGTCGCCGTGGCCGNCGNTGNCNNCTTCCTCCTCCTCCTCCTCCGCAGCAGCAAGAAGCCCAAGGGCTGCTTNGACCCTGAGAACTTCAAGGAGTTTAAGCTTGTGGAGAAGAGGCAGATCANTCATAATGTGGCCAAGTTCAGATTTGCTCTACCAACCCCTGCTTCTGTNCTGGGGNTTCCAATTNGCCAACATATCANTTNCAGAGGGCAGGATGNTACTTAGCGAGGAAGTAATCAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB658345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGATCTTGGACGGTTTGAGCTTGTTATTAAGATGTATCCCCAAGGAAGAATGTCTCATCATTTTCATGAGATGAAAGTTGGTGACTATTTATCTGTGAGAGGACCTAAGGGTCGCTTCAAATACCAACCTGGGCAAGTAAGAGCATTTGGAATGTTAGCTGGAGGATCAGGCATTACCCCAATGTTCCAAGTCACAAGA GCAATTCTTGAAAACCCAAGTGA CAATACGAAAGTGCACTTAATCTATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAATTGGATAGTATGGTTGAAACCTATCCCGATCGCTTCAAGATATACTATGTATTAAATCAGCCTCCAGAAATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGCCCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAAC AAAGCCATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTTTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAA CA TTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACAGAATGAAACTAATTATTTTTTTTTCAAaaaaggga                                                                                                        ]
[+] EMBL AU032013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCAACCTGGGCAAGTAAGAGCATTTGGAATGTTAGCTGGAGGATCAGGCATTACCCCAATGTTCCAAGTCACAAGAGGCAATTCTTGAAAACCCAAGTGACCAATCCGAAAGTGCACTTAATCTATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAATTGGATAGTATGGTTGAAACCTATCCCGATCGCTTCAAGATATACTATGTATTAAATCAGCCTCCAGAAATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGCCCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAAC AAAGCCATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAA CA TTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACAGAATGAAACTAATTATTTTTTTTTCAATCAGAATTTTGGACACAAaaaaaa                                                                                        ]
[+] EMBL AU164863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGCCCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAAC AAAGCCATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAA CA TTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACAGAATGAAACTAATTATTTTNTTTTCAATCAGAATTTTGGACACAAGGTTGGAACGTTCAAAAAAAAAa                                                                       ]
[+] EMBL AU161509             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTCGGACCTCCTCCCATGAACAAAACCCATGGCTGAACCCCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCCTCCACAGTGGAACAATACCGAAATAACAGCGATGGACAACCATTTTTCGTTCACCTTCAGTAGAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATNAAAGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCNAAAAACAACACCTACTTGAGTTGGGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGACAGNATGAAACTNATTATTTTTTTTTCAATCAGNATTTTGGACACAAGGTTGGNACGTTCAAAAAAAAA                                                                        ]




>consensus_11726#0
GCCAATCCACCTCCTCCCTCCCCTCCACCTCGCCGCCGCCGCCGCCGCCGCATCTGCCGA
AGGCGGGAGCCGTGAGGGGAAGGACCTGTGGCACGAGGTGGTGGCGGCATGGAGTTCCTG
CAGGGGCAGAGCACGGAGACCGCCGTGGCCGTGGCGGTGGCCGTCGTCGCCGTGGCCGCC
GGCGCCGCCTTCCTCCTCCTCCTCCTCCGCAGCAGCAAGAAGCCCAAGGGCTGCTTGGAC
CCTGAGAACTTCAAGGAGTTTAAGCTTGTGGAGAAGAGGCAGATCAGTCATAATGTGGCC
AAGTTCAGATTTGCTCTACCAACCCCTGCTTCTGTGCTGGGGCTTCCAATTGGCCAACAT
ATCAGTTGCAGAGGGCAGGATGCTACTGGCGAGGAAGTAATCAAGCCTTATACTCCAACT
ACGCTGGATTCTGATCTTGGACGGTTTGAGCTTGTTATTAAGATGTATCCCCAAGGAAGA
ATGTCTCATCATTTTCATGAGATGAAAGTTGGTGACTATTTATCTGTGAGAGGACCTAAG
GGTCGCTTCAAATACCAACCTGGGCAAGTAAGAGCATTTGGAATGTTAGCTGGAGGATCA
GGCATTACCCCAATGTTCCAAGTCACAAGAGCAATTCTTGAAAACCCAAGTGACAATACG
AAAGTGCACTTAATCTATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAATTG
GATAGTATGGTTGAAACCTATCCCGATCGCTTCAAGATATACTATGTATTAAATCAGCCT
CCAGAAATCTGGAATGGTGGTGTTGGGTTTGTGTCAATGGAAATGATCCAAACCCATTGC
CCGGCACCTGCTGCTGACATTCAGATATTGAGATGCGGACCTCCTCCCATGAACAAAGCC
ATGGCTGAACACCTGGAGAATCTTGGCTACACGAAGGAAATGCAGTTCCAATTCTAAGCC
TCCACAGTGGAACAATACCGAAATAACAGCGATGGACAACATTTTCGTTCACCTTCAGTA
GAAATTGTCTGACCCTAGTGCCATTTAATCAAGATATAGGCGAACTTTAAACCCGATAAA
AGTAGAATGTCAGGTCAGCATATTTTGAGTGAAAGCAAAAAACAACACCTACTTGAGTTG
GGGTCAGAAGTTCCTGTAGCCCATCATTTTTGTGCCAATGCTGTTCAATTCCAGACAGAC
AGAATGAAACTAATTATTTTTTTTTCAATCAGAATTTTGGACACAAGGTTGGAACGTTCA
AAAAAAAAGCTAACTCGTTGCTCAGGTGATTAAAGAATGACCAACTTGTACCATTTGATT
ATGAGAAGAAAAACAACTAC
clustalw multiple alignements is not computed in this case