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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11729#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1915 fasta sequence
[AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTTCAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCGCCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATTCCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTGAAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGAACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACAGTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTCATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAGGGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCGGAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAGCACTGGAGTGTTTGGATTGGTTTGTGGAAGGGGTGATTGACAATTTTGGTGAAGAATATTTGCGAAGCCCCACTAGTGAGGATATGCAACATATACTACAAATGAATGAGGCACGGGGCTTCCCTGGCATGTTAGGAAGTATTGGCTGTATGCACTGGGAGTGGAAAAATTGCCCAGTTATATGGAGGCGTCACCTTACTCATACCGATCATGGTGCGACTACAATGATTCTTGAAGCGGTTGCTTCAAATGACAGCTGGATATGGCATGCTTTCTTTGGTGCCATTGGATCGAACAATGAGATCACCATTCTCGGCCAACCACAGTTGTTCACCGAATTGTTGAAAGGCCAAGCTGCTCATGTGCAATTTTCTGTCAACAGGAGGCAATACAATACAGGCTACTATCTTGCTGATGGAATATACCCAGAAGGCAATGTCTTTGTTAAAACAGTAACCCTCCCTCAGAGCGAATAGGATCAATTGTTTGCACGGCATCAAGAAGGAGCAAGGAAGGACGTCCAGGAAGCCTTTGGACTTCTACAATCTCGTTTTGCCATTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTTGCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTGACTCGGATGAAATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAACACTGTGCCTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACACATGCACAACTTAGAAGGGACTTAATGGGGCATATTTGGCAGCGTTTTGGTCCATTTGGCAACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGTTACTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAGTGTCCCGCTGGATTACTTGGGATATTGGACTTCCAACATAACCAATGATGTGGTTCTATTGTTCCCTTTGTCCGACTCGCTACTATTCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCTATGTTCTGTTCCAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTA-GGAGTATATTACTTTTGAGTTT]
[+] EMBL AK103436 [AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTTCAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCGCCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATTCCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTGAAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGAACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACAGTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTCATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAGGGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCGGAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAGCACTGGAGTGTTTGGATTGGTTTGTGGAAGGGGTGATTGACAATTTTGGTGAAGAATATTTGCGAAGCCCCACTAGTGAGGATATGCAACATATACTACAAATGAATGAGGCACGGGGCTTCCCTGGCATGTTAGGAAGTATTGGCTGTATGCACTGGGAGTGGAAAAATTGCCCAGTTATATGGAGGCGTCACCTTACTCATACCGATCATGGTGCGACTACAATGATTCTTGAAGCGGTTGCTTCAAATGACAGCTGGATATGGCATGCTTTCTTTGGTGCCATTGGATCGAACAATGAGATCACCATTCTCGGCCAACCACAGTTGTTCACCGAATTGTTGAAAGGCCAAGCTGCTCATGTGCAATTTTCTGTCAACAGGAGGCAATACAATACAGGCTACTATCTTGCTGATGGAATATACCCAGAAGGCAATGTCTTTGTTAAAACAGTAACCCTCCCTCAGAGCGAATAGGATCAATTGTTTGCACGGCATCAAGAAGGAGCAAGGAAGGACGTCCAGGAAGCCTTTGGACTTCTACAATCTCGTTTTGCCATTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTTGCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTGACTCGGATGAAATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAACACTGTGCCTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACACATGCACAACTTAGAAGGGACTTAATGGGGCATATTTGGCAGCGTTTTGGTCCATTTGGCAACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGTTACTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAGTGTCCCGCTGGATTACTTGGGATATTGGACTTCCAACATAACCAATGATGTGGTTCTATTGTTCCCTTTGTCCGACTCGCTACTATTCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCTATGTTCTGTTCCAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTA GGAGTATATTACTTTTGAGTTT]
[+] EMBL CB638118 [AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTTCAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCGCCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATTCCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCA ]
[+] EMBL CB638170 [AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAACAGCGCCTGCGCAGCGAGGGGGGTCTACTGTGCGTGTTGCGCGGCTGTGTCTTCAACACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTATCac ]
[+] EMBL CF322772 [ TCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTGAAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGAACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACAGTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTCATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAGGGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCGGAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAG ]
[-] EMBL CB638171 [ CATTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTTGCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTGACTCGGATGAAATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAACACTGTGCCTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACACATGCACAACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGTTTTGGTCCATTTGGCAACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGTTACTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAGTGTCCCGCTGGATTACTTGGGATATTGGACTTCCAACATAACCAATGATGTGGTTCTATTGTTCCCTTTGTCCGACTCGCTACTATTCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCTATGTTCTGTTCCAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTAGGGAGTATATTACTTTTGA ]
consensusID : consensus_11729#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[ACTCTGCCAGGAAGCCTTTGGGTTTTTCCAATTTCGTTTTGCCCTTGGGCGGGGTCCCCCTCGTTTTTTTTAACAAAAGATTTTTTCAAAATTATGCCAGCTTGCCTTATTCTTCTCACCCTGCCAGTTGGGGTTGAGAAAGATATGGGAAGCTCTTGTTTTGGCTCGGATGAAATCTTAGGGCCCCTGGCTGTTCTTTTTTCAGATATCAACCCTGTGCCTTATGACTGTTATCCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCCACCCATGCCCAACTTAGAAGGGGCTTAATGGAGCATTTTTGGCAGCGTTTTGGTCCCTTTGGCACCAAGTAAACCAATCCATCCTCCCGTATGGTTATGTTAAAAGCCTAAGCCCCTTTGGGGTTTCTGTAAGCCCCCCTTTTGGAAAGCCAGAATTTCCAACAGTGTCCCCCTGGATTACTTGGGATTTTGGGCTTCCCACATAACCAATGATGGGGTTTTATTGTTCCCTTTGTCCGCCTCGCTACTTTTCCAACTTGTTGGTCCCAAAGCTAGCTTTGTGGTGCTATGTTTTGTTCCCCCTGTGGATGTTTTGGGTTTTTTATACCAAAGAGCCTTAGGGGTATTTTCCTTTTGAGTTTGTGATCCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA759261 [ACTCTGCCAGGAAGCCTTTGGGTTTTTCCAATTTCGTTTTGCCCTTGGGCGGGGTCCCCCTCGTTTTTTTTAACAAAAGATTTTTTCAAAATTATGCCAGCTTGCCTTATTCTTCTCACCCTGCCAGTTGGGGTTGAGAAAGATATGGGAAGCTCTTGTTTTGGCTCGGATGAAATCTTAGGGCCCCTGGCTGTTCTTTTTTCAGATATCAACCCTGTGCCTTATGACTGTTATCCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCCACCCATGCCCAACTTAGAAGGGGCTTAATGGAGCATTTTTGGCAGCGTTTTGGTCCCTTTGGCACCAAGTAAACCAATCCATCCTCCCGTATGGTTATGTTAAAAGCCTAAGCCCCTTTGGGGTTTCTGTAAGCCCCCCTTTTGGAAAGCCAGAATTTCCAACAGTGTCCCCCTGGATTACTTGGGATTTTGGGCTTCCCACATAACCAATGATGGGGTTTTATTGTTCCCTTTGTCCGCCTCGCTACTTTTCCAACTTGTTGGTCCCAAAGCTAGCTTTGTGGTGCTATGTTTTGTTCCCCCTGTGGATGTTTTGGGTTTTTTATACCAAAGAGCCTTAGGGGTATTTTCCTTTTGAGTTTGTGATCCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11729#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence
[GACACTGACATGGACTGAGGAGTAGAAATTATACTTCACAACATGACAATTGAGGATGAGAAAGATATGGCCAGCGCTTGTTTTGACCCAGATGAAATTTCAGGGACATTGGCTGTTATTTTATCAGACATCAACACTGTGCCTGCTGATTCTTTTACTGAAGTGCTACATAGAAATGCTTCTGTTTGTGCTCCACCGAAACATACACGACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGATTTGGTCCATTTGGCAACCAGTAAAACAATTAATCCTAGTGTGGAAAAGTCAGTGAAGGTCAAGGCTATCTGGCTTTAACTACCACCAAACAGCTGTCAGCATAAATTGCTACATTTTCAGAAAGACATTTTAAAGTTGCTCCCAACAAATCCTAGGTTTTCAACAGAAGTCCTCAATCTAGACTGGAAGTTGCTAATTTGTTAAAGTTAGCTCTTCGATACAGCTCCCTGCAGTGAGTTGATCATGGTCATCTTTTTTCTATATATTACCAGGGAGTGCTTAGGCAGGCTTTTCGTATGCACCTTTTGAAGTACTGTAGGCCAACAAGTTGGAATTTTTCAGCAGAATTTTATTGTGCATAACAGCAATCTCAAGCAGGAGTTCCATTGGATTA]
[+] EMBL CF318997 [GACACTGACATGGACTGAGGAGTAGAAATTATACTTCACAACATGACAATTGAGGATGAGAAAGATATGGCCAGCGCTTGTTTTGACCCAGATGAAATTTCAGGGACATTGGCTGTTATTTTATCAGACATCAACACTGTGCCTGCTGATTCTTTTACTGAAGTGCTACATAGAAATGCTTCTGTTTGTGCTCCACCGAAACATACACGACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGATTTGGTCCATTTGGCAACCAGTAAAACAATTAATCCTAGTGTGGAAAAGTCAGTGAAGGTCAAGGCTATCTGGCTTTAACTACCACCAAACAGCTGTCAGCATAAATTGCTACATTTTCAGAAAGACATTTTAAAGTTGCTCCCAACAAATCCTAGGTTTTCAACAGAAGTCCTCAATCTAGACTGGAAGTTGCTAATTTGTTAAAGTTAGCTCTTCGATACAGCTCCCTGCAGTGAGTTGATCATGGTCATCTTTTTTCTATATATTACCAGGGAGTGCTTAGGCAGGCTTTTCGTATGCACCTTTTGAAGTACTGTAGGCCAACAAGTTGGAATTTTTCAGCAGAATTTTATTGTGCATAACAGCAATCTCAAGCAGGAGTTCCATTGGATTA]
consensusID : consensus_11729#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 507 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACTGAAACTCTGCAAGGGGCATCATAATTCATAGTACCGAGTAATATGCTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGGATTTTAAACAAAAGAAACAGTTGAAACCCATCACTTGTTATTATGTTGGAAATTTACTACCCCAGTCCCCAGGTAATCCAATGGAACTCCTGCTTGAGATTGCTGTTATGCACAATAAAATTCTGCTGAAAAATTCCAACTTGTTGGCCTACAGTACTTCAAAAGGTGCATACGAAAAGCCTGCCTAAGCACTCCCTGGTAATATATAGAAAAAAGATGACCATGATCAACTCACTGCAGGGAGCTGTATCGAAGAGCTAACTTTAACAAATTAGCAACTTCCAGTCTAGATTGAGGACACACTAGGATTAATTGTTTTACTGGTTGCCAAATGGACCAAATCGCTGCCAAATATGCTCCATTAAGTCCCTTCTA]
[+] EMBL CF318998 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACTGAAACTCTGCAAGGGGCATCATAATTCATAGTACCGAGTAATATGCTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGGATTTTAAACAAAAGAAACAGTTGAAACCCATCACTTGTTATTATGTTGGAAATTTACTACCCCAGTCCCCAGGTAATCCAATGGAACT ]
[+] EMBL CA997983 [ ccgagTTTTTTTTTTTTTTTTTTGACTGAAACTCTGCAAGTGTCATCATAATTCATAGTACCGAGTAATATGCTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGTATCTTAGACAAAAGAAACAGTAGAAGCACATCACTAGTTATTATGTTGGAAATCTACTACCCCAGTCCCCAGGTAATCCAATGGAACTCCTGCTTGAGATTGCTGTTATGCACAATAAAATTCTGCTGAAAAATTCCAACTTGTTGGCCTACAGTACTTCAAAAGGTGCATACGAAAAGCCTGCCTAAGCACTCCCTGGTAATATATAGAAAAAAGATGACCATGATCAACTCACTGCAGGGAGCTGTATCGAAGAGCTAACTTTAACAAATTAGCAACTTCCAGTCTAGATTGAGGACACACTAGGATTAATTGTTTTACTGGTTGCCAAATGGACCAAATCGCTGCCAAATATGCTCCATTAAGTCCCTTCTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11729#0 AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTT 60
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 CCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTG 120
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 GCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTT 180
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 CAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCG 240
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 CCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATT 300
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 CCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTG 360
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 AGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTG 420
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 AAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGA 480
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 ACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACA 540
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 GTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTC 600
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 ATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAG 660
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 GGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCG 720
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 GAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAGCACTGGAGTGTTTGGATT 780
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 GGTTTGTGGAAGGGGTGATTGACAATTTTGGTGAAGAATATTTGCGAAGCCCCACTAGTG 840
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 AGGATATGCAACATATACTACAAATGAATGAGGCACGGGGCTTCCCTGGCATGTTAGGAA 900
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 GTATTGGCTGTATGCACTGGGAGTGGAAAAATTGCCCAGTTATATGGAGGCGTCACCTTA 960
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 CTCATACCGATCATGGTGCGACTACAATGATTCTTGAAGCGGTTGCTTCAAATGACAGCT 1020
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 GGATATGGCATGCTTTCTTTGGTGCCATTGGATCGAACAATGAGATCACCATTCTCGGCC 1080
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 AACCACAGTTGTTCACCGAATTGTTGAAAGGCCAAGCTGCTCATGTGCAATTTTCTGTCA 1140
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 ACAGGAGGCAATACAATACAGGCTACTATCTTGCTGATGGAATATACCCAGAAGGCAATG 1200
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 TCTTTGTTAAAACAGTAACCCTCCCTCAGAGCGAATAGGATCAATTGTTTGCACGGCATC 1260
consensus_11729#1 ------------------------------------------------------------
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 AAGAAGGAGCAAGGAAGGACGTCCAGGAAGCCTTTGGACTTCTACAATCTCGTTTTGCCA 1320
consensus_11729#1 ----------------ACTCTGCCAGGAAGCCTTTGGGTTTTTCCAATTTCGTTTTGCCC 44
consensus_11729#2 ------------------------------------------------------------
consensus_11729#3 ----------------------------------------TTTTTTTTTTTTTTTTTTTT 20
consensus_11729#0 TTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTT 1380
consensus_11729#1 TTGGGCGGGGTCCCCCTCGTTTTTTTTAACAAAAGATTTTT-TCAAAATTATGCCAGCTT 103
consensus_11729#2 ----------------------------------GACACTGACATGGACTGAG-GAGTAG 25
consensus_11729#3 TTTTTTTTGGACTGAAACTCTGCAAGGGGCATCATAATTCA--TAGTACCGAGTAATATG 78
* * * *
consensus_11729#0 GCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTG 1440
consensus_11729#1 GCCTTATTCTTCTCACCCTGCCAGTTGGGGTTGAGAAAGATATGGGAAGCTCTTGTTTTG 163
consensus_11729#2 AAATTATACTTCACAACATGACAATTGAGGATGAGAAAGATATGGCCAGCGCTTGTTTTG 85
consensus_11729#3 CTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGGATTTTA 138
* * * * * * * * ** *** ** ****
consensus_11729#0 ACTCGGATGAA-ATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAAC--ACTGTGC 1497
consensus_11729#1 GCTCGGATGAA-ATCTTAGGGCCCCTGGCTGTTCTTTTTTCAGATATCAAC--CCTGTGC 220
consensus_11729#2 ACCCAGATGAA-ATTTCAGGGACATTGGCTGTTATTTTATCAGACATCAAC--ACTGTGC 142
consensus_11729#3 AACAAAAGAAACAGTTGAAACCCATCACTTGTTATTATGTTGGAAATTTACTACCCCAGT 198
* ** * * * * **** ** * * ** ** ** * *
consensus_11729#0 CTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACAC 1557
consensus_11729#1 CTTATGACTGTTATCCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCCACCC 280
consensus_11729#2 CTGCTGATTCTTTTACTGAAGTGCTACATAGAAATGCTTCTGTTTGTGCTCCACCGAAAC 202
consensus_11729#3 CCCCAGGTAATCCAATGGAACTCCTGCTTGAGATTGCTG----TTATGCACAATAAAATT 254
* * * *** * * * * **** ** *** * * *
consensus_11729#0 ATGCACAACTTAGAAGGGACTTAATGGGGCATATTTGGCAGCGTTTTGGTCCATTTGGCA 1617
consensus_11729#1 ATGCCCAACTTAGAAGGGGCTTAATGGAGCATTTTTGGCAGCGTTTTGGTCCCTTTGGCA 340
consensus_11729#2 ATACACGACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGATTTGGTCCATTTGGCA 262
consensus_11729#3 CTGCTGAA--AAATTCCAACTTGTTGGCCTACAGTACTTCAAAA---GGTGCAT---ACG 306
* * * * *** *** * * *** * * *
consensus_11729#0 ACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGT 1677
consensus_11729#1 CCAAGTAAACCAATCCATCCTCCCGTATGGTTATGTTAAAAGCCTAAGCCCCTTTGGGGT 400
consensus_11729#2 ACCAGTAAAACAATTAATCCTAGTGTGGAAAAGTCAGTGAAGGTCAAGGCTATCTGGCTT 322
consensus_11729#3 AAAAGCCTGCCTAAGCACTCCCTGGTA-ATATATAGAAAAAAGATGACCATGATCAACTC 365
** * * * * ** * ** *
consensus_11729#0 TA--------CTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAG---TGTCCCGC 1726
consensus_11729#1 TT--------CTGTAAGCCCCCCTTTTGGAAAGCCAGAATTTCCAACAG---TGTCCCCC 449
consensus_11729#2 TAACTACCACCAAACAGCTGTCAGCATAAATTGCTACATTTTCAGAAAGACATTTTAAAG 382
consensus_11729#3 A---------CTGCAGGGAGCTGTATCGAAGAGCTA--ACTTTAACAAA----------- 403
* * * ** * * *
consensus_11729#0 TGGATTACTTGGGATATTGGACTTCCAACATAA-CCAATGATGTGGTTCTATTGTTCCC- 1784
consensus_11729#1 TGGATTACTTGGGATTTTGGGCTTCCCACATAA-CCAATGATGGGGTTTTATTGTTCCC- 507
consensus_11729#2 TTGCTCCCAACAAATCCTAGGTTTTCAACAGAAGTCCTCAATCTAGACTGGAAGTTGCTA 442
consensus_11729#3 TTAGCAACTTCCAGT-CTAGATTGAGGACACACTAGGATTAATTGTTTTACTGGTTGCCA 462
* * * * * * *** * * *** *
consensus_11729#0 -TTTGTCCGACTCGCTACTAT--TCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCT 1841
consensus_11729#1 -TTTGTCCGCCTCGCTACTTT--TCCAACTTGTTGGTCCCAAAGCTAGCTTTGTGGTGCT 564
consensus_11729#2 ATTTGTTAAAGTTAGCTCTTCGATACAGCTCCCTG--CAGTGAGTTGATCATGGTCATCT 500
consensus_11729#3 AATGGACCAAATCGCTGCCA------AATATGCTC--CATTAAGTCCCTTCTA------- 507
* * * * * * ** *
consensus_11729#0 ATGTTCTGTTC--CAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTAGGAGTA 1899
consensus_11729#1 ATGTTTTGTTC--CCCCTGTGGATGTTTTGGGTTTTTTATACCAAAGAGCCTTAGGGGTA 622
consensus_11729#2 TTTTTCTATATATTACCAGGGAGTGCTTAGGCAGGCTTTTCGTATGCACCTTTTGAAGTA 560
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 TATTACTTTTG-AGTTT------------------------------------------- 1915
consensus_11729#1 TTTTCCTTTTG-AGTTTGTGATCCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 681
consensus_11729#2 CTGTAGGCCAACAAGTTGGAATTTTTCAGCAGAATTTTATTGTGCATAACAGCAATCTCA 620
consensus_11729#3 ------------------------------------------------------------
consensus_11729#0 ---------------------
consensus_11729#1 AAAA----------------- 685
consensus_11729#2 AGCAGGAGTTCCATTGGATTA 641
consensus_11729#3 ---------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||