cluster # 11743

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Oryza sativa
cluster # 11743 cluster # 11743 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11743#0 length = 996 sequences # 6

consensus_11743#1 length = 877 sequences # 2
consensus_11743#2 length = 514 sequences # 1

consensusID : consensus_11743#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 996
fasta sequence

                              [TAGTAGTATCGTCATCACGAAACAAATTAACCATAGCAGCAGCATATCCTCTCCCATGCTTCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCATGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTAGCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGAACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCGCTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGACAAGCCGCTGGAGACGGCGACTACGAC-AACCCCGCCTACTCCGGCACCGGCGGCGGCGGCTCCGGAGACCGAACAAGCGGAGGCGGTGGCGTCGCCGGAGTTGGAGTTGGAGCTGGAGGAGGGGCCGAAAGTGGACCCGCGGCGGCTGGAGGAGAAGTTCGCGGTGCTGAACACGGGGGTGTACGAGTGCCGGTCGTGCGGGTACCGGTACGACCAGGCCGCCGGTGACCCGTCGTACCCGGTGCCGCCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCGCGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGCAGTTCGGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATATATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCTATTCCATCTCGAATTTTGAATTTAGATAAAAAAA]

[+] EMBL AK068722             [TAGTAGTATCGTCATCACGAAACAAATTAACCATAGCAGCAGCATATCCTCTCCCATGCTTCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCATGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTAGCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGAACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCGCTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGACAAGCCGCTGGAGACGGCGACTACGAC AACCCCGCCTACTCCGGCACCGGCGGCGGCGGCTCCGGAGACCGAACAAGCGGAGGCGGTGGCGTCGCCGGAGTTGGAGTTGGAGCTGGAGGAGGGGCCGAAAGTGGACCCGCGGCGGCTGGAGGAGAAGTTCGCGGTGCTGAACACGGGGGTGTACGAGTGCCGGTCGTGCGGGTACCGGTACGACCAGGCCGCCGGTGACCCGTCGTACCCGGTGCCGCCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCGCGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGCAGTTCGGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATATATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATT                                                         ]
[+] EMBL AK104226             [                ACGAAACAAATTAACCATAGCAGCAGCATATCCTCTCCCATGCTTCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCATGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTAGCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGAACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCGCTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGACAAGCCGCTGGAGACGGCGACTACGAC AACCCCGCCTACTCCGGCACCGGCGGCGGCGGCTCCGGAGACCGAACAAGCGGAGGCGGTGGCGTCGCCGGAGTTGGAGTTGGAGCTGGAGGAGGGGCCGAAGGTGGACCCGCGGCGGCTGGAGGAGAAGTTCGCGGTGCTGAACACGGGGGTGTACGAGTGCCGGTCGTGCGGGTACCGGTACGACCAGGCCGCCGGTGACCCGTCGTACCCGGTGCCGCCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCGCGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGCAGTTCGGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATATATCAGTACGTTTTATTTTTA                                                                           ]
[+] EMBL OSS13803A            [                                                      CATGCTTCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCATGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTAGCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGAACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCGNTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGACAAGCCGCTGGAGACGGCGACTACGAC AACCCCGCCTACTTCGGCAACGGCGGCGGCGGCTNCGGAGACCGAACAAGCGGAGGCGGTGGCGTCG CGGAGTTGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C91876               [                                                       ATGCTTCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCATGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTAGCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGAACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCGCTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGACAAGCCGCTGGAGACGGCGACTACGACNAACCCg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU065155             [                                                       ATGCTTCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCATGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTAGCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGAACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCGCTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU174021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGTACGACCAGGCCGCCGGTGACCCGTCGTACCCGGTGCCGCCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCGCGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGCAGTTCGGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATATATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCTATTCCATCTCGAATTTTGAATTTAGATAAAAAAA]




>consensus_11743#0
TAGTAGTATCGTCATCACGAAACAAATTAACCATAGCAGCAGCATATCCTCTCCCATGCT
TCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCA
TGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTA
GCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGA
ACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCG
CTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGACAAGCCG
CTGGAGACGGCGACTACGACAACCCCGCCTACTCCGGCACCGGCGGCGGCGGCTCCGGAG
ACCGAACAAGCGGAGGCGGTGGCGTCGCCGGAGTTGGAGTTGGAGCTGGAGGAGGGGCCG
AAAGTGGACCCGCGGCGGCTGGAGGAGAAGTTCGCGGTGCTGAACACGGGGGTGTACGAG
TGCCGGTCGTGCGGGTACCGGTACGACCAGGCCGCCGGTGACCCGTCGTACCCGGTGCCG
CCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCGCGGCG
CAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGCAGTTC
GGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTC
CTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTC
TTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATA
TATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTG
CTATTCCATCTCGAATTTTGAATTTAGATAAAAAAA

consensusID : consensus_11743#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 877
fasta sequence

                              [AAATACTAGTACTAGTAGAGCATGAACATCGCAAGAACCATGATTTGCCTCCACCACTGCAAGAATCAAGAACGTATCACCGTCGCCTCCACCACCGCCGACGCCGCGTCTCCCAGTCGCCTCCGCCGACGACGACGACGTGTCTCCTGGACGCCTCCGCCGGTGACCCGTCGT-ACCCGGTG-CCGCCGGGG-CTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCGCGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGCAGTTCGGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATATATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCTATTCCATCTCGAATTTTGAATTTAGATATTTAACCAGTAACTTCATCCAAATGCAGGCCTATAATTTTCTGAGTTTTTCAGCTGCTGAATCAAGCTCCTTTTGAAATTGAAATGAACAAGGGGGCAGGGATCAAGTAGCTAGCAAGGCAGTTCTGCGGTTGTGACGGGCCTAATTACATCAGTCGCCTGATATTCTATCAAATCTGAGTAAATTGTTCCAAACGTTCCTTCATAGGTCCACATGTCTTCTCTAGATCCGACTCTCTAAATATTCCAGTTGGTTAGTTTACCAAAAGAGAGACTCAGAGACAAATTTACCTTTCAATCCAA]

[+] EMBL AK120326             [AAATACTAGTACTAGTAGAGCATGAACATCGCAAGAACCATGATTTGCCTCCACCACTGCAAGAATCAAGAACGTATCACCGTCGCCTCCACCACCGCCGACGCCGCGTCTCCCAGTCGCCTCCGCCGACGACGACGACGTGTCTCCTGGACGCCTCCGCCGGTGACCCGTCGT ACCCGGTG CCGCCGGGG CTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCGCGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGCAGTTCGGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATATATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCTATTCCATCTCGAATTTTGAATTTAGATATTTAACCAGTAACTTCATCCAAATGCAGGCCTATAATTTTCTGAGTTTTTCAGCTGCTGAATCAAGCTCCTTTTGAAATTGAAATGAACAAGGGGGCAGGGATCAAGTAGCTAGCAAGGCAGTTCTGCGGTTGTGACGGGCCTAATTACATCAGTCGCCTGATATTCTATCAAATCTGAGTAAATTGTTCCAAACGTTCCTTCATAGGTCCACATGTCTTCTCTAGATCCGACTCTCTAAATATTCCAGTTGGTTAGTTTACCAAAAGAGAGACTCAGAGACAAATTTACCTTTCAATCCAA]
[+] EMBL BI808501             [                                                                                                                                                                     ACCCGTCGTGACCCGGTGTCCTCCGGGGTCTTCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGT CGGC CGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCC GGTTCGCGCAG ACCAGCAGTTCGGCCTCGGCGGC ACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCAGCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACCCCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAAGTATATATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATAaaaa                                                                                                                                                                                                                                                                                                                                               ]




>consensus_11743#1
AAATACTAGTACTAGTAGAGCATGAACATCGCAAGAACCATGATTTGCCTCCACCACTGC
AAGAATCAAGAACGTATCACCGTCGCCTCCACCACCGCCGACGCCGCGTCTCCCAGTCGC
CTCCGCCGACGACGACGACGTGTCTCCTGGACGCCTCCGCCGGTGACCCGTCGTACCCGG
TGCCGCCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGTGCGGCG
CGGCGCAGTCCTTCTTCGAGAGCAAGAGCGTCGAGATCGCCGGGTTCGCGCAGAACCAGC
AGTTCGGCCTCGGCGGCAACTCCCTCACCGGCGACCAGAAAGCGCTGCTCATCTACGGCA
GCCTCCTCGTCGGCTTCCTCTTCTTCCTCTCCGGCTACTTCCTCCAATGAACCAGTCACC
CCCTCTTCCTAATTCTCTACCTCTACCTCTACCTCTACTGTGCCTGTTTCTACTAATTAA
GTATATATCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACA
TAGTGCTATTCCATCTCGAATTTTGAATTTAGATATTTAACCAGTAACTTCATCCAAATG
CAGGCCTATAATTTTCTGAGTTTTTCAGCTGCTGAATCAAGCTCCTTTTGAAATTGAAAT
GAACAAGGGGGCAGGGATCAAGTAGCTAGCAAGGCAGTTCTGCGGTTGTGACGGGCCTAA
TTACATCAGTCGCCTGATATTCTATCAAATCTGAGTAAATTGTTCCAAACGTTCCTTCAT
AGGTCCACATGTCTTCTCTAGATCCGACTCTCTAAATATTCCAGTTGGTTAGTTTACCAA
AAGAGAGACTCAGAGACAAATTTACCTTTCAATCCAA

consensusID : consensus_11743#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence

                              [TCGCGGTACCGGTCTGACCCAAGTCCCCCGGTGACCCGTCGTACCCCGGTCCGCCGGGCTCCCGTTCGACAAGCTCCCCGACGACTGGCGGTGCCCGACGTTGCGGCGCGGCGCAAGTCCTTCTTCGAGANCATAGTAGCGTCGAGATCTGCCAGGGTTCTGCGCAGAACCAACCAGTTGCGGCCTGCGGCGGCAACTGCCCTGCACCGGCGGACCAGAAAGCGCTGGCTGCATCTAGCGGCAGCCTGCCTGCGTGCGGCTTGCCCTGCTTGCTTGCCTGCTGCCGGCTGACCTTGCCTGCCAAATGGAACCCAGTGCACCCCCCTGCTTNCCTGAATTGCTGCTGACCTGCTGACCTGCTGACCTGCTGACTGGGGCCTGGTTTGCTACTAATTAAGTATATATCAGTACGTTNTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCTATTCCATCTCGAATTTTGAATTTNCGATATTTAACCCAGTAAAAAAAAAA]

[+] EMBL BM038354             [TCGCGGTACCGGTCTGACCCAAGTCCCCCGGTGACCCGTCGTACCCCGGTCCGCCGGGCTCCCGTTCGACAAGCTCCCCGACGACTGGCGGTGCCCGACGTTGCGGCGCGGCGCAAGTCCTTCTTCGAGANCATAGTAGCGTCGAGATCTGCCAGGGTTCTGCGCAGAACCAACCAGTTGCGGCCTGCGGCGGCAACTGCCCTGCACCGGCGGACCAGAAAGCGCTGGCTGCATCTAGCGGCAGCCTGCCTGCGTGCGGCTTGCCCTGCTTGCTTGCCTGCTGCCGGCTGACCTTGCCTGCCAAATGGAACCCAGTGCACCCCCCTGCTTNCCTGAATTGCTGCTGACCTGCTGACCTGCTGACCTGCTGACTGGGGCCTGGTTTGCTACTAATTAAGTATATATCAGTACGTTNTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCTATTCCATCTCGAATTTTGAATTTNCGATATTTAACCCAGTAAAAAAAAAA]




>consensus_11743#2
TCGCGGTACCGGTCTGACCCAAGTCCCCCGGTGACCCGTCGTACCCCGGTCCGCCGGGCT
CCCGTTCGACAAGCTCCCCGACGACTGGCGGTGCCCGACGTTGCGGCGCGGCGCAAGTCC
TTCTTCGAGANCATAGTAGCGTCGAGATCTGCCAGGGTTCTGCGCAGAACCAACCAGTTG
CGGCCTGCGGCGGCAACTGCCCTGCACCGGCGGACCAGAAAGCGCTGGCTGCATCTAGCG
GCAGCCTGCCTGCGTGCGGCTTGCCCTGCTTGCTTGCCTGCTGCCGGCTGACCTTGCCTG
CCAAATGGAACCCAGTGCACCCCCCTGCTTNCCTGAATTGCTGCTGACCTGCTGACCTGC
TGACCTGCTGACTGGGGCCTGGTTTGCTACTAATTAAGTATATATCAGTACGTTNTATTT
TTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCTATTCCATCTCGAATTT
TGAATTTNCGATATTTAACCCAGTAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11743#0      TAGTAGTATCGTCATCACGAAACAAATTAACCATAGCAGCAGCATATCCTCTCCCATGCT 60
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ------------------------------------------------------------
                                                                                   

consensus_11743#0      TCCATGGATTCCTTCTAGCTTCGCCTTAGCTTCTCCTCCTCTACAGTCTACACGCGCGCA 120
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ------------------------------------------------------------
                                                                                   

consensus_11743#0      TGCATAGCATCTATAGAGAGAGAACAAATTAATTATTAGGATTTAGTCGCAATGGCATTA 180
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ------------------------------------------------------------
                                                                                   

consensus_11743#0      GCCATGGCGCCCAGGCTAGTCCACCACCCTTGCTGCATGATGCTCTCCAAGAACCCAAGA 240
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ------------------------------------------------------------
                                                                                   

consensus_11743#0      ACGCCGCCGCCACCGCCGGCGATGCACCACCACCATGCCCACAAGCCGCTCATCACCGCG 300
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ------------------------------------------------------------
                                                                                   

consensus_11743#0      CTCACCAGCACGTCGTCGTTCTTGCTCCGCTCCGTCGACGTCTCCAAGGACGACAAGCCG 360
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ------------------------------------------------------------
                                                                                   

consensus_11743#0      CTGGAGACGGCGACTACGACAACCCCGCCTACTCCGGCACCGGCGGCGGCGGCTCCGGAG 420
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      --------------------------------------------------------AAAT 4
                                                                                   

consensus_11743#0      ACCGA-ACAAGCGGAGGCGGTGGCGTCGCCGGAGTTGGAGTTGGA----GCTGGAGGAGG 475
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ACTAGTACTAGTAGAG-CATGAACATCGCAAGAACCATGATTTGCCTCCACCACTGCAAG 63
                                                                                   

consensus_11743#0      GGCCGAAAGTGGACCCGCGGCGGCTGGAGGAGAAGTT-CGCGGTGCTGAACACGGGGGTG 534
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      AATCAAGAACGTATCACCGTCGCCTCCACCACCGCCGACGCCGCGTCTCCCAGTCGCCTC 123
                                                                                   

consensus_11743#0      TACGAGTGCCGGTCGTGCGGGTACCGGTACGACC--AGGCCGCCGGTGACCCGTCGTACC 592
consensus_11743#2      ---------------TCGCGGTACCGGTCTGACCCAAGTCCCCCGGTGACCCGTCGTACC 45
consensus_11743#1      CGCCGACGACGACGACGTGTCTCCTGG-ACGCCT-----CCGCCGGTGACCCGTCGTACC 177
                                            * * **   * *      ** ******************

consensus_11743#0      CGGTGCCGCCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGT-GC 651
consensus_11743#2      CCGGTCCGCCGGG-CTCCCGTTCGACAAGCTCCCCGACGACTGGCGGTGCCCGACGTTGC 104
consensus_11743#1      CGGTGCCGCCGGGGCTGCCGTTCGAGCAGCTCCCCGACGACTGGCGGTGCCCGACGT-GC 236
                       * *  ******** ** ********  ****************************** **

consensus_11743#0      GGCGCGGCGCA-GTCCTTCTTCGAGAGCAAG--AGCGTCGAGATC-GCCGGG--TTCGCG 705
consensus_11743#2      GGCGCGGCGCAAGTCCTTCTTCGAGANCATAGTAGCGTCGAGATCTGCCAGGGTTCTGCG 164
consensus_11743#1      GGCGCGGCGCA-GTCCTTCTTCGAGAGCAAG--AGCGTCGAGATC-GCCGGG--TTCGCG 290
                       *********** ************** **    ************ *** **  *  ***

consensus_11743#0      CAGAACCAGC-AGTT-CGGCCT-CGGCGGCAACTCCCT--CACCGGCG-ACCAGAAAGCG 759
consensus_11743#2      CAGAACCAACCAGTTGCGGCCTGCGGCGGCAACTGCCCTGCACCGGCGGACCAGAAAGCG 224
consensus_11743#1      CAGAACCAGC-AGTT-CGGCCT-CGGCGGCAACTCCCT--CACCGGCG-ACCAGAAAGCG 344
                       ******** * **** ****** *********** **   ******** ***********

consensus_11743#0      CTGCT--CATCTA-CGGCAGCCTCCTCGT---CGGCTTCCTCTTCTTCCTCTCCGGCTAC 813
consensus_11743#2      CTGGCTGCATCTAGCGGCAGCCTGCCTGCGTGCGGCTTGCCCTGCTTGCTTGCCTGCTGC 284
consensus_11743#1      CTGCT--CATCTA-CGGCAGCCTCCTCGT---CGGCTTCCTCTTCTTCCTCTCCGGCTAC 398
                       ***    ****** ********* *  *    ****** * ** *** **  ** *** *

consensus_11743#0      TTCCT------------CCAATGAA--CCAGT-CACCCCCTC---TTCCTAATTCTCTAC 855
consensus_11743#2      CGGCTGACCTTGCCTGCCAAATGGAACCCAGTGCACCCCCCTGCTTNCCTGAATTGCTGC 344
consensus_11743#1      TTCCT------------CCAATGAA--CCAGT-CACCCCCTC---TTCCTAATTCTCTAC 440
                          **            * **** *  ***** *******     * *** * *  ** *

consensus_11743#0      C--TCTACC--TCTACC--TCTACTGT-----GCCTGTTT--CTACTAATTAAGTATATA 902
consensus_11743#2      TGACCTGCTGACCTGCTGACCTGCTGACTGGGGCCTGGTTTGCTACTAATTAAGTATATA 404
consensus_11743#1      C--TCTACC--TCTACC--TCTACTGT-----GCCTGTTT--CTACTAATTAAGTATATA 487
                           ** *    ** *    ** ***      ***** **  ******************

consensus_11743#0      TCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCT 962
consensus_11743#2      TCAGTACGTTNTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCT 464
consensus_11743#1      TCAGTACGTTTTATTTTTATTGGCTAATTAATTAATTAATCTGTGTGAATACATAGTGCT 547
                       ********** *************************************************

consensus_11743#0      ATTCCATCTCGAATTTTGAATTTA-GATAAAAAAA------------------------- 996
consensus_11743#2      ATTCCATCTCGAATTTTGAATTTNCGATATTTAACCCAGTAAAAAAAAAA---------- 514
consensus_11743#1      ATTCCATCTCGAATTTTGAATTTA-GATATTTAACCAGTAACTTCATCCAAATGCAGGCC 606
                       ***********************  ****   **                          

consensus_11743#0      ------------------------------------------------------------
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      TATAATTTTCTGAGTTTTTCAGCTGCTGAATCAAGCTCCTTTTGAAATTGAAATGAACAA 666
                                                                                   

consensus_11743#0      ------------------------------------------------------------
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      GGGGGCAGGGATCAAGTAGCTAGCAAGGCAGTTCTGCGGTTGTGACGGGCCTAATTACAT 726
                                                                                   

consensus_11743#0      ------------------------------------------------------------
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      CAGTCGCCTGATATTCTATCAAATCTGAGTAAATTGTTCCAAACGTTCCTTCATAGGTCC 786
                                                                                   

consensus_11743#0      ------------------------------------------------------------
consensus_11743#2      ------------------------------------------------------------
consensus_11743#1      ACATGTCTTCTCTAGATCCGACTCTCTAAATATTCCAGTTGGTTAGTTTACCAAAAGAGA 846
                                                                                   

consensus_11743#0      -------------------------------
consensus_11743#2      -------------------------------
consensus_11743#1      GACTCAGAGACAAATTTACCTTTCAATCCAA 877