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Oryza sativa
cluster # 11767 cluster # 11767       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11767#0 length = 2001 sequences # 7  
consensus_11767#1 length = 1337 sequences # 2  

consensusID : consensus_11767#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2001
fasta sequence
                              [TGCTTCCTCCTCCCCTCCTCTCATGTCATTGTCCTGCAATACACGAGGAGCAAAGAGTTGTGTGTAATCCTCCTCCTACTCTGGGTCAGCTCTTAATCCCTTCAACTTCCGTCGGTTGGACGCCACCGGAAGCCAATCCCTGTTTGGTGTTTTACCCCCAATTTTGTCAGATTTTTTGGAGCGAAACCACGAGCTGTTTGAAGTGTTCGGCTTCGGAATCTCTTTCTTGGAGTTCTAGGAATGGGGTTTTGATACAAAGATTGAAGCCTTTTTGTTAGCGTTGGTGCAAAGATTGTATTGTATTGTTTTTTTTTTCTGCGATGGGTGGAGGCGTCACGGAGCGGCTCCCGGAGGGCAGCAGCGAGCCGCTGCTCCCGACGAAGCGGGAGGGCGGCGGCGGCGGCGGCGAGTTCGCCGGCGCGGTGTTCAACCTGTCGACGACCATCGTCGGGGCCGGAATCATGGCGCTGCCGGCCACGATGAAGGTGCTGGGGCTCGCCCCGGGGCTCGTCGCGATCTTGCTCGCCGCGCTCCTCACCGACGCCTCCATCGAGCTGCTCGTCCGGTCCAGCCGCGCCGCCGGCGCGCCGTCGTACGGCGCCGTCATGGGGGACGCGTTCGGGTGGTGGGGGAGGCGGCTGCTCCAGGTCTGCGTCGTCGTCAACAACATCGGCGTCATGATCGTCTACATGATCATCATCGGTGATGTGCTATCTGGAACCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGTGGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCATGTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTGTTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAAGATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCGAATTTCATTCCGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTTCCAGCCGCGATCACTCTAAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAATCCTGTCCATC-TTCAT-GATTGTTC-TTGCA-ATT-GTATCA-AACGT-AGTAGCTGTGTATAGCGATGCATATTCAATG-TTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATT-CCAAAATCC-TATTGGCGAGTCA--GTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAAAATCATTATTTAGGCA-AGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAG-TTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCA-AATGTGAATTATGGAGTTATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATGTAAATCACTGAAATGGCCACTCTGTTCATGCCAAAAAAAAAA]

[+] EMBL AK120497             [TGCTTCCTCCTCCCCTCCTCTCATGTCATTGTCCTGCAATACACGAGGAGCAAAGAGTTGTGTGTAATCCTCCTCCTACTCTGGGTCAGCTCTTAATCCCTTCAACTTCCGTCGGTTGGACGCCACCGGAAGCCAATCCCTGTTTGGTGTTTTACCCCCAATTTTGTCAGATTTTTTGGAGCGAAACCACGAGCTGTTTGAAGTGTTCGGCTTCGGAATCTCTTTCTTGGAGTTCTAGGAATGGGGTTTTGATACAAAGATTGAAGCCTTTTTGTTAGCGTTGGTGCAAAGATTGTATTGTATTGTTTTTTTTTTCTGCGATGGGTGGAGGCGTCACGGAGCGGCTCCCGGAGGGCAGCAGCGAGCCGCTGCTCCCGACGAAGCGGGAGGGCGGCGGCGGCGGCGGCGAGTTCGCCGGCGCGGTGTTCAACCTGTCGACGACCATCGTCGGGGCCGGAATCATGGCGCTGCCGGCCACGATGAAGGTGCTGGGGCTCGCCCCGGGGCTCGTCGCGATCTTGCTCGCCGCGCTCCTCACCGACGCCTCCATCGAGCTGCTCGTCCGGTCCAGCCGCGCCGCCGGCGCGCCGTCGTACGGCGCCGTCATGGGGGACGCGTTCGGGTGGTGGGGGAGGCGGCTGCTCCAGGTCTGCGTCGTCGTCAACAACATCGGCGTCATGATCGTCTACATGATCATCATCGGTGATGTGCTATCTGGAACCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGTGGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCATGTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTGTTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAAGATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCGAATTTCATTCCGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTTCCAGCCGCGATCACTCTAAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAATCCTGTCCATC TTCAT GATTGTTC TTGCA ATT GTATCA AACGT AGTAGCTGTGTATAGCGATGCATATTCAATG TTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATT CCAAAATCC TATTGGCGAGTCA  GTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAAAATCATTATTTAGGCA AGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAG TTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCA AATGTGAATTATGGAGTTATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATGTAAATCA                                   ]
[+] EMBL AK099920             [                                                                    CCTCCTCCTACTCTGGGTCAGCTCTTAATCCCTTCAACTTCCGTCGGTTGGACGCCACCGGAAGCCAATCCCTGTTTGGTGTTTTACCCCCAATTTTGTCAGATTTTTTGGAGCGAAACCACGAGCTGTTTGAAGTGTTCGGCTTCGGAATCTCTTTCTTGGAGTTCTAGGAATGGGGTTTTGATACAAAGATTGAAGCCTTTTTGTTAGCGTTGGTGCAAAGATTGTATTGTATTGTTTTTTTTTTCTGCGATGGGTGGAGGCGTCACGGAGCGGCTCCCGGAGGGCAGCAGCGAGCCGCTGCTCCCGACGAAGCGGGAGGGCGGCGGCGGCGGCGGCGAGTTCGCCGGCGCGGTGTTCAACCTGTCGACGACCATCGTCGGGGCCGGAATCATGGCGCTGCCGGCCACGATGAAGGTGCTGGGGCTCGCCCCGGGGCTCGTCGCGATCTTGCTCGCCGCGCTCCTCACCGACGCCTCCATCGAGCTGCTCGTCCGGTCCAGCCGCGCCGCCGGCGCGCCGTCGTACGGCGCCGTCATGGGGGACGCGTTCGGGTGGTGGGGGAGGCGGCTGCTCCAGGTCTGCGTCGTCGTCAACAACATCGGCGTCATGATCGTCTACATGATCATCATCGGTGATGTGCTATCTGGAACCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGTGGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCATGTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTGTTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTATGTCTTCCGACAACCGAAGATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCGAATTTCATTCCGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTTCCAGCCGCGATCACTCTAAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAATCCTGTCCATC TTCAT GATTGTTC TTGCA ATT GTATCA AACGT AGTAGCTGTGTATAGCGATGCATATTCAATG TTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATT CCAAAATCC TATTGGCGAGTCA  GTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAAAATCATTATTTAGGCA AGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAG TTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCA AATGTGAATTATGGAG                                                                                   ]
[+] EMBL AK066102             [                                                                                                                                    CCAATCCCTGTTTGGTGTTTTACCCCCAATTTTGTCAGATTTTTTGGAGCGAAACCACGAGCTGTTTGAAGTGTTCGGCTTCGGAATCTCTTTCTTGGAGTTCTAGGAATGGGGTTTTGATACAAAGATTGAAGCCTTTTTGTTAGCGTTGGTGCAAAGATTGTATTGTATTGTTTTTTTTTTCTGCGATGGGTGGAGGCGTCACGGAGCGGCTCCCGGAGGGCAGCAGCGAGCCGCTGCTCCCGACGAAGCGGGAGGGCGGCGGCGGCGGCGGCGAGTTCGCCGGCGCGGTGTTCAACCTGTCGACGACCATCGTCGGGGCCGGAATCATGGCGCTGCCGGCCACGATGAAGGTGCTGGGGCTCGCCCCGGGGCTCGTCGCGATCTTGCTCGCCGCGCTCCTCACCGACGCCTCCATCGAGCTGCTCGTCCGGTCCAGCCGCGCCGCCGGCGCGCCGTCGTACGGCGCCGTCATGGGGGACGCGTTCGGGTGGTGGGGGAGGCGGCTGCTCCAGGTCTGCGTCGTCGTCAACAACATCGGCGTCATGATCGTCTACATGATCATCATCGGTGATGTGCTATCTGGAACCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGTGGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCATGTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTGTTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAAGATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCGAATTTCATTCCGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTTCCAGCCGCGATCACTCTAAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAATCCTGTCCATC TTCAT GATTGTTC TTGCA ATT GTATCA AACGT AGTAGCTGTGTATAGCGATGCATATTCAATG TTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATT CCAAAATCC TATTGGCGAGTCA  GTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAAAATCATTATTTAGGCA AGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAG TTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATC                                                                                                               ]
[+] EMBL CB666095             [                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGTTCAACCTGTCGACGACCATCGTCGGGGCCGGAATCATGGCGCTGCCGGCCACGATGAAGGTGCTGGGGCTCGCCCCGGGGCTCGTCGCGATCTTGCTCGCCGCGCTCCTCACCGACGCCTCCATCGAGCTGCTCGTCCGGTCCAGCCGCGCCGCCGGCGCGCCGTCGTACGGCGCCGTCATGGGGGACGCGTTCGGGTGGTGGGGGAGGCGGCTGCTCCAGGTCTGCGTCGTCGTCAACAACATCGGCGTCATGATCGTCTACATGATCATCATCGGTGATGTGCTATCTGGAACCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGTGGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCATGTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTGTTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA753015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGATCATCATCGGTGATGTGCTATCTGGAACCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGTGGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCATGTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTGTTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATNAAGCCAATAGTACACACATCATNGGTTCTATGCTCAACTGTCTATATCACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB666096             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAAGATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCGAATTTCATTCCGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTTCCAGCCGCGATCACTCTAAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAATCCTGTCCATC TTCAT GATTGTTC TTGCA ATT GTATCA AACGT AGTAGCTGTGTATAGCGATGCATATTCAATG TTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATT CCAAAATCC TATTGGCGAGTCA  GTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAAAATCATTATTTAGGCA AGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAG TTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCA AATGTGAATTATGGAGTTATTATTGTAAAAAAAaga                                                               ]
[+] EMBL BI811856             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGGCCATCGTTCATAGATTGTTCGTTGCACATTGGTATCACAACGTAAGTAGCTGTGTATAGCGATGCATATTCAATGTTTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATTCCCAAGATCCGTATTGGCGAGTCACGGTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCCAATAAAATCATTATTTAGGCACAGTATTTACGGGATTTATTTTACGGTTTATTTGGCCAACAACCCTTGACTCAATTATGTTGAGCTTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCCATGTACCATTCAAGATCCATTTGAATCACAATGTGAATTATGGAGTTATTATTGTAACCAAAGATAAACCATTATTTTTTCGAATGTAAATCCCTGAAATGGCCACTCTGTTCATGCCAAAAAAAAAA]


>consensus_11767#0 TGCTTCCTCCTCCCCTCCTCTCATGTCATTGTCCTGCAATACACGAGGAGCAAAGAGTTG TGTGTAATCCTCCTCCTACTCTGGGTCAGCTCTTAATCCCTTCAACTTCCGTCGGTTGGA CGCCACCGGAAGCCAATCCCTGTTTGGTGTTTTACCCCCAATTTTGTCAGATTTTTTGGA GCGAAACCACGAGCTGTTTGAAGTGTTCGGCTTCGGAATCTCTTTCTTGGAGTTCTAGGA ATGGGGTTTTGATACAAAGATTGAAGCCTTTTTGTTAGCGTTGGTGCAAAGATTGTATTG TATTGTTTTTTTTTTCTGCGATGGGTGGAGGCGTCACGGAGCGGCTCCCGGAGGGCAGCA GCGAGCCGCTGCTCCCGACGAAGCGGGAGGGCGGCGGCGGCGGCGGCGAGTTCGCCGGCG CGGTGTTCAACCTGTCGACGACCATCGTCGGGGCCGGAATCATGGCGCTGCCGGCCACGA TGAAGGTGCTGGGGCTCGCCCCGGGGCTCGTCGCGATCTTGCTCGCCGCGCTCCTCACCG ACGCCTCCATCGAGCTGCTCGTCCGGTCCAGCCGCGCCGCCGGCGCGCCGTCGTACGGCG CCGTCATGGGGGACGCGTTCGGGTGGTGGGGGAGGCGGCTGCTCCAGGTCTGCGTCGTCG TCAACAACATCGGCGTCATGATCGTCTACATGATCATCATCGGTGATGTGCTATCTGGAA CCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGT GGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCAT GTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTG TTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAA TGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAG TGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGC TGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTG TCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATG TGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTG TTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTAC GGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAA GATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCGAATTTCATTC CGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCA TTTTTCCAGCCGCGATCACTCTAAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAA TCCTGTCCATCTTCATGATTGTTCTTGCAATTGTATCAAACGTAGTAGCTGTGTATAGCG ATGCATATTCAATGTTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATTCCAAAATCC TATTGGCGAGTCAGTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAA AATCATTATTTAGGCAAGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCC TTGACTCAATTATGTTGAGTTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGA AGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCAAATGTGAATTATGGAGTT ATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATGTAAATCACTGAAATGGCCACT CTGTTCATGCCAAAAAAAAAA



consensusID : consensus_11767#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1337
fasta sequence
                              [GTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAAGATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCAAATTTCATTCCGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTTCCAGCCGCGATCACTCTAAGGTAAGTTAATGGATTAATGTTCATTGTGATGCTTTTATTTTGTTCCACCTCTACATATATTATGAAAAAATGGCTGGGATATTTATTCCGTTATCTCAAAAAAAAAAAAAGTGTTATAGTACTTCTGCTAACATGCACGAAGAGAAGTGAAGAATTCTACATTTGCAGATTTCCACACTGTAGTAATTGCTTGTTTTGATATCACCTTTTCAATGTTGTGATGTTATGGCTGTCTAATTTATTTTGCTTCTAATTTTGCAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAATCCTGTCCATCTTCATGATTGTTCTTGCAATTGTATCAAACGTAGTAGCTGTGTATAGCGATGCATATTCAATGTTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATTCCAAAATCCTATTGGCGAGTCAGTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAAAATCATTATTTAGGCAAGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAGTTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCAAATGTGAATTATGGAGTTATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATGTAAATCACTGAAATGGCAACTC]

[+] EMBL CB621787             [GTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAAGATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCAAATTTCATTCCGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTTCCAGCCGCGATCACTCTAAGGTAAGTTAATGGATTAATGTTCATTGTGATGCTTTTATTTTGTTCCACCTCTACATATATTATGAAAAAATGGCTGGGATATTTATTCCGTTATCTCAAAAAAAAAAAAAGTGTTATAGTACTTCTGCTAACATGCACGAAGAGAAGTGAAGAATTCTACATTTGCAGATTTCCACACTGTAGTAATTGCTTGTTTTGATATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB621788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCCGCGATCACTCTAAGGTAAGTTAATGGATTAATGTTCATTGTGATGCTTTTATTTTGTTCCACCTCTACATATATTATGAAAAAATGGCTGGGATATTTATTCCGTTATCTCAAAAAAAAAAAAAGTGTTATAGTACTTCTGCTAACATGCACGAAGAGAAGTGAAGAATTCTACATTTGCAGATTTCCACACTGTAGTAATTGCTTGTTTTGATATCACCTTTTCAATGTTGTGATGTTATGGCTGTCTAATTTATTTTGCTTCTAATTTTGCAGGGATCCACACAGTATAGCAAAGAAGTGGGACAAAATCCTGTCCATCTTCATGATTGTTCTTGCAATTGTATCAAACGTAGTAGCTGTGTATAGCGATGCATATTCAATGTTCCACAGGAAAAGTTCCCCTTCCATAGCCTGATATTCCAAAATCCTATTGGCGAGTCAGTGGATTCTTTATCTGAAAGATGGCTTGTACATTAGCTAGCAAATAAAATCATTATTTAGGCAAGTATTTACGGGATTTATTTTACGGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAGTTGGATGTATCTATAGGATGGGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCAAATGTGAATTATGGAGTTATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATGTAAATCACTGAAATGGCAACTC]


>consensus_11767#1 GTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAATGCCT AAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAGTGCCA GTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGCTGAAG GACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTGTCTAT ATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATGTGCTC GCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTGTTAGA GTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTACGGCTT AATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAAGATTT TCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCAAATTTCATTCCGAGC ATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCATTTTT CCAGCCGCGATCACTCTAAGGTAAGTTAATGGATTAATGTTCATTGTGATGCTTTTATTT TGTTCCACCTCTACATATATTATGAAAAAATGGCTGGGATATTTATTCCGTTATCTCAAA AAAAAAAAAAGTGTTATAGTACTTCTGCTAACATGCACGAAGAGAAGTGAAGAATTCTAC ATTTGCAGATTTCCACACTGTAGTAATTGCTTGTTTTGATATCACCTTTTCAATGTTGTG ATGTTATGGCTGTCTAATTTATTTTGCTTCTAATTTTGCAGGGATCCACACAGTATAGCA AAGAAGTGGGACAAAATCCTGTCCATCTTCATGATTGTTCTTGCAATTGTATCAAACGTA GTAGCTGTGTATAGCGATGCATATTCAATGTTCCACAGGAAAAGTTCCCCTTCCATAGCC TGATATTCCAAAATCCTATTGGCGAGTCAGTGGATTCTTTATCTGAAAGATGGCTTGTAC ATTAGCTAGCAAATAAAATCATTATTTAGGCAAGTATTTACGGGATTTATTTTACGGTTT ATTTGGCAAACAACCCTTGACTCAATTATGTTGAGTTGGATGTATCTATAGGATGGGTGT GTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAATCAAA TGTGAATTATGGAGTTATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATGTAAAT CACTGAAATGGCAACTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11767#0      TGCTTCCTCCTCCCCTCCTCTCATGTCATTGTCCTGCAATACACGAGGAGCAAAGAGTTG 60
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      TGTGTAATCCTCCTCCTACTCTGGGTCAGCTCTTAATCCCTTCAACTTCCGTCGGTTGGA 120
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      CGCCACCGGAAGCCAATCCCTGTTTGGTGTTTTACCCCCAATTTTGTCAGATTTTTTGGA 180
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      GCGAAACCACGAGCTGTTTGAAGTGTTCGGCTTCGGAATCTCTTTCTTGGAGTTCTAGGA 240
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      ATGGGGTTTTGATACAAAGATTGAAGCCTTTTTGTTAGCGTTGGTGCAAAGATTGTATTG 300
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      TATTGTTTTTTTTTTCTGCGATGGGTGGAGGCGTCACGGAGCGGCTCCCGGAGGGCAGCA 360
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      GCGAGCCGCTGCTCCCGACGAAGCGGGAGGGCGGCGGCGGCGGCGGCGAGTTCGCCGGCG 420
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      CGGTGTTCAACCTGTCGACGACCATCGTCGGGGCCGGAATCATGGCGCTGCCGGCCACGA 480
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      TGAAGGTGCTGGGGCTCGCCCCGGGGCTCGTCGCGATCTTGCTCGCCGCGCTCCTCACCG 540
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      ACGCCTCCATCGAGCTGCTCGTCCGGTCCAGCCGCGCCGCCGGCGCGCCGTCGTACGGCG 600
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      CCGTCATGGGGGACGCGTTCGGGTGGTGGGGGAGGCGGCTGCTCCAGGTCTGCGTCGTCG 660
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      TCAACAACATCGGCGTCATGATCGTCTACATGATCATCATCGGTGATGTGCTATCTGGAA 720
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      CCTCCTCTGGTGGTGAGCACCATTATGGTGTTTTAGAAGGATGGTTTGGGCCACAATGGT 780
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      GGAACGGGCGTTTCTTTGTCCTCCTGGTTACAACTCTTGTTGTATTTACTCCACTGGCAT 840
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      GTTTGAAGCGTGTCGATTCACTGAGTTACACATCTGCCATATCCGTTGCTCTGGCAGTTG 900
consensus_11767#1      ------------------------------------------------------------
                                                                                   

consensus_11767#0      TTTTTGTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAA 960
consensus_11767#1      -----GTTATTATTACTGCAGGAATTGCTATTGTCAAGTTGATAAAGGGACAAATTCCAA 55
                            *******************************************************

consensus_11767#0      TGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAG 1020
consensus_11767#1      TGCCTAAGTTGTTTCCTGATGTTCCCGACTTGGCATCTATTTGGGAACTTTTCACAGCAG 115
                       ************************************************************

consensus_11767#0      TGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGC 1080
consensus_11767#1      TGCCAGTTCTTGTCACTGCTTATGTTTGCCATTATAATGTCCACCCAATTCATAACGAGC 175
                       ************************************************************

consensus_11767#0      TGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTG 1140
consensus_11767#1      TGAAGGACCCTTCTCAGATTAAGCCAATAGTACACACATCATTGGTTCTATGCTCAACTG 235
                       ************************************************************

consensus_11767#0      TCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATG 1200
consensus_11767#1      TCTATATCACAACAAGTTTCTTTGGATATCTCCTCTTTGGTGAATCTACGCTGTCTGATG 295
                       ************************************************************

consensus_11767#0      TGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTG 1260
consensus_11767#1      TGCTCGCCAACTTCGACTCCAATCTTGGTATTCCATACAGTCAGATGCTAAATGATGCTG 355
                       ************************************************************

consensus_11767#0      TTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTAC 1320
consensus_11767#1      TTAGAGTGAGCTATGCTGTTCACCTTATGCTTGTGTTCCCCATGATATTCCATGCACTAC 415
                       ************************************************************

consensus_11767#0      GGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAA 1380
consensus_11767#1      GGCTTAATTTGGATGGGCTTCTCTTTTCCTCATCAAGTCCTCTGTCTTCCGACAACCGAA 475
                       ************************************************************

consensus_11767#0      GATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCGAATTTCATTC 1440
consensus_11767#1      GATTTTCTGTAATGACAGCGGTACTTCTCCTAGTTATTTTCCTATCAGCAAATTTCATTC 535
                       ************************************************* **********

consensus_11767#0      CGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCA 1500
consensus_11767#1      CGAGCATCTGGGATGCCTTCCAATTTACTGGTGCAACTGCTGCTGTGTGTATCGCCTTCA 595
                       ************************************************************

consensus_11767#0      TTTTTCCAGCCGCGATCACTCTAAGG---------------------------------- 1526
consensus_11767#1      TTTTTCCAGCCGCGATCACTCTAAGGTAAGTTAATGGATTAATGTTCATTGTGATGCTTT 655
                       **************************                                  

consensus_11767#0      ------------------------------------------------------------
consensus_11767#1      TATTTTGTTCCACCTCTACATATATTATGAAAAAATGGCTGGGATATTTATTCCGTTATC 715
                                                                                   

consensus_11767#0      ------------------------------------------------------------
consensus_11767#1      TCAAAAAAAAAAAAAGTGTTATAGTACTTCTGCTAACATGCACGAAGAGAAGTGAAGAAT 775
                                                                                   

consensus_11767#0      ------------------------------------------------------------
consensus_11767#1      TCTACATTTGCAGATTTCCACACTGTAGTAATTGCTTGTTTTGATATCACCTTTTCAATG 835
                                                                                   

consensus_11767#0      -----------------------------------------------GATCCACACAGTA 1539
consensus_11767#1      TTGTGATGTTATGGCTGTCTAATTTATTTTGCTTCTAATTTTGCAGGGATCCACACAGTA 895
                                                                      *************

consensus_11767#0      TAGCAAAGAAGTGGGACAAAATCCTGTCCATCTTCATGATTGTTCTTGCAATTGTATCAA 1599
consensus_11767#1      TAGCAAAGAAGTGGGACAAAATCCTGTCCATCTTCATGATTGTTCTTGCAATTGTATCAA 955
                       ************************************************************

consensus_11767#0      ACGTAGTAGCTGTGTATAGCGATGCATATTCAATGTTCCACAGGAAAAGTTCCCCTTCCA 1659
consensus_11767#1      ACGTAGTAGCTGTGTATAGCGATGCATATTCAATGTTCCACAGGAAAAGTTCCCCTTCCA 1015
                       ************************************************************

consensus_11767#0      TAGCCTGATATTCCAAAATCCTATTGGCGAGTCAGTGGATTCTTTATCTGAAAGATGGCT 1719
consensus_11767#1      TAGCCTGATATTCCAAAATCCTATTGGCGAGTCAGTGGATTCTTTATCTGAAAGATGGCT 1075
                       ************************************************************

consensus_11767#0      TGTACATTAGCTAGCAAATAAAATCATTATTTAGGCAAGTATTTACGGGATTTATTTTAC 1779
consensus_11767#1      TGTACATTAGCTAGCAAATAAAATCATTATTTAGGCAAGTATTTACGGGATTTATTTTAC 1135
                       ************************************************************

consensus_11767#0      GGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAGTTGGATGTATCTATAGGATG 1839
consensus_11767#1      GGTTTATTTGGCAAACAACCCTTGACTCAATTATGTTGAGTTGGATGTATCTATAGGATG 1195
                       ************************************************************

consensus_11767#0      GGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAA 1899
consensus_11767#1      GGTGTGTAAACTTTGGTCCGAAGTGTTTTAGTCCAATGTACAATTCAAGATCAATTTGAA 1255
                       ************************************************************

consensus_11767#0      TCAAATGTGAATTATGGAGTTATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATG 1959
consensus_11767#1      TCAAATGTGAATTATGGAGTTATTATTGTAACAAAAGATAAACAATTATTTTTTCGAATG 1315
                       ************************************************************

consensus_11767#0      TAAATCACTGAAATGGCCACTCTGTTCATGCCAAAAAAAAAA 2001
consensus_11767#1      TAAATCACTGAAATGGCAACTC-------------------- 1337
                       ***************** ****                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)