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Oryza sativa
cluster # 11778 cluster # 11778       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11778#0 length = 1337 sequences # 6  
consensus_11778#1 length = 1128 sequences # 3  

consensusID : consensus_11778#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1337
fasta sequence
                              [ACCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACGCCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGCAGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCCATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGGCGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAAGGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCTGCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCACATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTATTCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACCATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTGGATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCCAACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGTACTCAAACTTGAATTTCTTCAATACACCTATCAGGTCTGTGATGTTCAGTTAAATAATGCAGCGTTTGGTGGTAATGCAGGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTC-CACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTATTAAAGGTCTAGATTTTGTGGGGAAAACATTTTCCTTTTTTTATGACACCTAAATAGTCAAGAAAATCTTTTAAAAAAATTGTGATGATAGATTGATGTGTAATATATCAGTTCACNAACATATAA]

[+] EMBL AK067058             [ACCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACGCCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGCAGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCCATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGGCGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAAGGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCTGCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCACATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTATTCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACCATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTGGATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCCAACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGTACTCAAACTTGAATTTCTTCAATACACCTATCAGGTCTGTGATGTTCAGTTAAATAATGCAGCGTTTGGTGGTAATGCAGGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTC CACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTATTAAAGGTCTAGA                                                                                                                 ]
[+] EMBL CF328497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTC CACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTATTAAAGGTCTAGATTTTGTGGGGAAAAaaaaaaa                                                                                            ]
[-] EMBL CB965440             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTC CACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTATTAAAGGTCTAGATTTTGTGGGGAAAACATTTTCCTTTTTTTATGACACCTAAATAGTCAAGAAAATCTTTTAAAAAAATTGTGATGATAGATTGATGTGTAATATATCAGTTCACNAACATATAA]
[-] EMBL BU673066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTC CACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTATTAAAGGTCTAGATTTTGTGGGGAAAACATTTTCCTTTTTTTATGACACCTAAATAGTCAAGAAAATCTTTTAAAAAAATTGTGATGATAGATTGATGTGTAATATATCAGTTCACAAACATATAA]
[-] EMBL CB966737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTC CACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTATTAAAGGTCTAGATTTTGTGGGGAAAACATTTTCCTTTTTTTATGACACCTAAATAGTCAAGAAAATCTTTTAAAAAAATTGTGATGATAGATTGATGTGTAATATATCAGTTCAC AACATATAA]
[-] EMBL CF328496             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTCAATTGCCCTGTTTGCATGAACGAGCTGGTCGAACCGTCATCGACCATTTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTCTCACCGCGTGTATTTCCCTTTTGCGGAGTAAGCCGGTTTCCACCATTTTGGAAATCAGGGTCCCTCCTCCCACCCTGACTTTTGCCACATTGGCGTTTTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTATTAAAGGTTTAGATTTTGTGGGGAAAAaaaaaaaa                                                                                           ]


>consensus_11778#0 ACCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACG CCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGC AGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCC ATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGG CGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAA GGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCT GCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCAC ATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTAT TCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACC ATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTG GATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCC AACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGTACTCAAACTT GAATTTCTTCAATACACCTATCAGGTCTGTGATGTTCAGTTAAATAATGCAGCGTTTGGT GGTAATGCAGGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTG CCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTG CAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAA GCTGACCATGAACAACTTCCACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCA CCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGAT GATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTA ACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAAT GATCCATGCTATTAAAGGTCTAGATTTTGTGGGGAAAACATTTTCCTTTTTTTATGACAC CTAAATAGTCAAGAAAATCTTTTAAAAAAATTGTGATGATAGATTGATGTGTAATATATC AGTTCACNAACATATAA



consensusID : consensus_11778#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1128
fasta sequence
                              [CCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACGCCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGCAGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCCATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGGCGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAAGGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCTGCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCACATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTATTCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACCATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTGGATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCCAACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTCCACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTA]

[+] EMBL AK059108             [CCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACGCCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGCAGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCCATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGGCGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAAGGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCTGCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCACATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTATTCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACCATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTGGATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCCAACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTCCACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTA]
[+] EMBL AK105883             [CCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACGCCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGCAGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCCATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGGCGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAAGGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCTGCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCACATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTATTCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACCATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTGGATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCCAACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTCCACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGT                                                    ]
[+] EMBL CF323045             [                                                                                                                                                                                                                                                                                  GGACCTGAACTCACTCCCAGCTGAAGGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCTGCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCACATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTATTCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACCATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTGGATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCCAACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTGCCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGG                                                                                                                                                                                                                                                                                                      ]


>consensus_11778#1 CCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACGC CGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGCA GCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCCA TTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGGC GGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAAG GAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCTG CTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCACA TTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTATT CTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACCA TAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTGG ATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCCA ACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGCACTCCCTGAAC CCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTGCCCTGTCTGCATGAACGAGCTGG TCGAACCGTCATCGACCATCTGCGGTCACATTTTTTGCAAGCAGTGTATCAAGGCCTCAA TCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAAGCTGACCATGAACAACTTCCACC GCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCACCATTCTGGAAATCAGCGTCCCT CCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGATGATTGTATCTGAAAATGTTTGAC AGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTAACAGGTGTTGTACTGTTGTTGGA TCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAATGATCCATGCTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11778#0      ACCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACG 60
consensus_11778#1      -CCCCCGCGTCCCCCTTCCTCTGCTGGGTTCGCCCGCACGCCCGCCCGCACCGCCGCACG 59
                        ***********************************************************

consensus_11778#0      CCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGC 120
consensus_11778#1      CCGCCGGTCGCCCCTCCTCCCCGCCGACGCTGAGCACCGCCGGTCCCCGTCCCGCTAGGC 119
                       ************************************************************

consensus_11778#0      AGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCC 180
consensus_11778#1      AGCGGCGCCGCCGTCCTCCGACCGAGCCCCTCGCCGGTTCCTGCTCCTATTGCTCAAGCC 179
                       ************************************************************

consensus_11778#0      ATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGG 240
consensus_11778#1      ATTAGGTTGCATCGAAACAGTATGAGCTCTCATGATTTTGCAAGAAGGGTTCCGAAGAGG 239
                       ************************************************************

consensus_11778#0      CGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAA 300
consensus_11778#1      CGGCGGACTAACAAGTTGCTTTCGCAACTTCTTCCGGACCTGAACTCACTCCCAGCTGAA 299
                       ************************************************************

consensus_11778#0      GGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCT 360
consensus_11778#1      GGAGCTGATGATGGGGGATCACCTTCCAGTAGTGTGCTCGTCTCACACGCCCAGACTTCT 359
                       ************************************************************

consensus_11778#0      GCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCAC 420
consensus_11778#1      GCTGTAGCTGTGGCTGGAACCTCGCAGTATTTGGTGCCAGCAGTTGTTGCGGGGCCGCAC 419
                       ************************************************************

consensus_11778#0      ATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTAT 480
consensus_11778#1      ATTGGAATGAGTAGTTGTCCCATTATCGTGGATGATATCAATGATGATGTTGTGATTTAT 479
                       ************************************************************

consensus_11778#0      TCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACC 540
consensus_11778#1      TCTGCAAGCTCGTTCCCTCAAGTGAGGCAGCAGGCTCCAAGGACAGAACCTGTTGTGACC 539
                       ************************************************************

consensus_11778#0      ATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTG 600
consensus_11778#1      ATAGAAGATGATTCTGAAACTACCCCTGGACAAGCAGGGGATGCAGTTGATGAGCATGTG 599
                       ************************************************************

consensus_11778#0      GATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCC 660
consensus_11778#1      GATATACTACTATCTCTGACTCTGGGCAGGTATCCTAGGCATGGTCATCAGAGATCCTCC 659
                       ************************************************************

consensus_11778#0      AACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATGTACTCAAACTT 720
consensus_11778#1      AACATCAGCACCAGCCCTGTGATACATATAATTGACACACCTAGCAATG----------- 708
                       *************************************************           

consensus_11778#0      GAATTTCTTCAATACACCTATCAGGTCTGTGATGTTCAGTTAAATAATGCAGCGTTTGGT 780
consensus_11778#1      ------------------------------------------------------------
                                                                                   

consensus_11778#0      GGTAATGCAGGCACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTG 840
consensus_11778#1      -----------CACTCCCTGAACCCGAGAAGGCCGTTCCGAAGGAACCAACTTTCAATTG 757
                                  *************************************************

consensus_11778#0      CCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTG 900
consensus_11778#1      CCCTGTCTGCATGAACGAGCTGGTCGAACCGTCATCGACCATCTGCGGTCACATTTTTTG 817
                       ************************************************************

consensus_11778#0      CAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAA 960
consensus_11778#1      CAAGCAGTGTATCAAGGCCTCAATCCAGGCTCAGAAGAAGTGCCCTACCTGCCGGAGGAA 877
                       ************************************************************

consensus_11778#0      GCTGACCATGAACAACTTCCACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCA 1020
consensus_11778#1      GCTGACCATGAACAACTTCCACCGCGTGTATCTCCCTTCTGCGGAGTAAGCCGGTTTCCA 937
                       ************************************************************

consensus_11778#0      CCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGAT 1080
consensus_11778#1      CCATTCTGGAAATCAGCGTCCCTCCTCCCACCCTGACTCTCGCCACATTGGCGTTCTGAT 997
                       ************************************************************

consensus_11778#0      GATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTA 1140
consensus_11778#1      GATTGTATCTGAAAATGTTTGACAGGCTTGCTAGCATACCGTTTTGCTGGAGCAGTTTTA 1057
                       ************************************************************

consensus_11778#0      ACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAAT 1200
consensus_11778#1      ACAGGTGTTGTACTGTTGTTGGATCCGTTAAAAGAATACGATTGTATGTCCTGTGGAAAT 1117
                       ************************************************************

consensus_11778#0      GATCCATGCTATTAAAGGTCTAGATTTTGTGGGGAAAACATTTTCCTTTTTTTATGACAC 1260
consensus_11778#1      GATCCATGCTA------------------------------------------------- 1128
                       ***********                                                 

consensus_11778#0      CTAAATAGTCAAGAAAATCTTTTAAAAAAATTGTGATGATAGATTGATGTGTAATATATC 1320
consensus_11778#1      ------------------------------------------------------------
                                                                                   

consensus_11778#0      AGTTCACNAACATATAA 1337
consensus_11778#1      -----------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)