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Oryza sativa
cluster # 11782 cluster # 11782       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11782#0 length = 1851 sequences # 8  
consensus_11782#1 length = 477 sequences # 1  

consensusID : consensus_11782#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1851
fasta sequence
                              [CCAGCGGGCCGAGCCGCGGAGAACGAGGCGAGGCGGTGGGGAAGGCTCCGGCGAGCCTCCGCGCGCGCCGCGCTGGTGCTCTGCTCGCTGACGATGATTCCAGTCGTCGTCGTCCTCCACCGGTGTGCGGTCTCCTCCTCCTGGCCGGATCGGGTTTTCGAAGCCAAGCACATCGCGGGAGCCGGCGAGCAAGATATGCAAGATGATCTGCCTGATGATCTAACTGCATCTCAGTACATCGGCTATGACAAATTTCTGGGTGGTCTTCTGCAAGAGGGATTTGATGAAGTATCCTGCCGAAGCAGGTATCAGTTTGCACGGTACCACAAGAACTTCACAAGAATACCTTCTTCATACCTCTTAGAAAGGTTAAGGAGACAAGAAGCATTGCAGAAGAAGTGTGGTCCAGGCACTAAATCATACAAGCAAGCTGTGAAGCTGCTGAGGTCCAGTCAGGGCGTCAACATGACGACAGATTGCAACTATCTGTTCTTGACAGTACATGCTGGGTTAGGGAACAGAATGCTTGAGATTGCTTCAGCATTTCTTTATGCACTCCTTACAAACCGGATTTTGCTTTTGGACCGTTATCAGGAGATCGGTGACCTTTTCTGTGAACCTTTCCCAGGAACCTCGTGGTTAATGCCTTCGGATTTCCCTCTAAACTATGGTGAATTTACTCAGAGTAGCCCAGAGAGCTATGGAAACATGCTGCAGAATAAGGTTGTCGGTGACAATACAGATCAGTCTCTGGCTGGTTCTAGGCCTCCCTACGTGTTCCTCTACCTTGATGGTAACTATGAATTCCATGACAAGCTTTTCTTCTGCGAAGACGACCAACAGTTCCTGCAAGATGTGCCGTGGTTGATCATGAGAACCGACATGTACTTTATACCATCACTATTTCTTATTCCAAGTTACCAAGATGAGCTCAGCAGGCTATTTCCTGAGAAAGATGCTGTTTTTCATCACTTGGCACGCCATCTTTTCCATCCGACGAATAGCATATGGTATTCAGTTAAAGGGTACTACAGGTCCTACCTTGCCAAAGCTAATAAAACTGTGGGAATTCAGATCAGGATATTTGAGAAAGAGGGCATCTTGCAAAAAAACGGGCGATTTCCATATGTCTTAGAACAGATCCTTTCATGCGCTCAGAATGAAAAGCTGCTGCCAGAAATCAGTATGAAAGATGAAGCAGAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGCTCCTGGTACAGTGATCAGATCCAGAAG-AAGTACAGTGAGCACCCAACAGTCGATGGAACCAGGGTAGAAGTATACCAGCCGAGCCATGAGGAGTACCAGAGATCAAAGAACAAGAAGCACAACA-TGAAAGCACTGGCCGAGATCTACCTACTC-AGCATGACGGACGTGCTCATCACCAGTGGCTTCTCCACCTTCGGCTACGCCGCGCAGGGCCTCTCCGGCCTGACGCCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGCAAGATGGTGCCGTTCGTGAGGCACTGCGAGGACGTCAGTTGGGGCCTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGA-TTTTTTTTCTTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTAGATAACTGAAGAACAAAATAGCAGTAAAGTTGTGTGTTACCTGAACATTGT]

[+] EMBL AK100977             [CCAGCGGGCCGAGCCGCGGAGAACGAGGCGAGGCGGTGGGGAAGGCTCCGGCGAGCCTCCGCGCGCGCCGCGCTGGTGCTCTGCTCGCTGACGATGATTCCAGTCGTCGTCGTCCTCCACCGGTGTGCGGTCTCCTCCTCCTGGCCGGATCGGGTTTTCGAAGCCAAGCACATCGCGGGAGCCGGCGAGCAAGATATGCAAGATGATCTGCCTGATGATCTAACTGCATCTCAGTACATCGGCTATGACAAATTTCTGGGTGGTCTTCTGCAAGAGGGATTTGATGAAGTATCCTGCCGAAGCAGGTATCAGTTTGCACGGTACCACAAGAACTTCACAAGAATACCTTCTTCATACCTCTTAGAAAGGTTAAGGAGACAAGAAGCATTGCAGAAGAAGTGTGGTCCAGGCACTAAATCATACAAGCAAGCTGTGAAGCTGCTGAGGTCCAGTCAGGGCGTCAACATGACGACAGATTGCAACTATCTGTTCTTGACAGTACATGCTGGGTTAGGGAACAGAATGCTTGAGATTGCTTCAGCATTTCTTTATGCACTCCTTACAAACCGGATTTTGCTTTTGGACCGTTATCAGGAGATCGGTGACCTTTTCTGTGAACCTTTCCCAGGAACCTCGTGGTTAATGCCTTCGGATTTCCCTCTAAACTATGGTGAATTTACTCAGAGTAGCCCAGAGAGCTATGGAAACATGCTGCAGAATAAGGTTGTCGGTGACAATACAGATCAGTCTCTGGCTGGTTCTAGGCCTCCCTACGTGTTCCTCTACCTTGATGGTAACTATGAATTCCATGACAAGCTTTTCTTCTGCGAAGACGACCAACAGTTCCTGCAAGATGTGCCGTGGTTGATCATGAGAACCGACATGTACTTTATACCATCACTATTTCTTATTCCAAGTTACCAAGATGAGCTCAGCAGGCTATTTCCTGAGAAAGATGCTGTTTTTCATCACTTGGCACGCCATCTTTTCCATCCGACGAATAGCATATGGTATTCAGTTAAAGGGTACTACAGGTCCTACCTTGCCAAAGCTAATAAAACTGTGGGAATTCAGATCAGGATATTTGAGAAAGAGGGCATCTTGCAAAAAAACGGGCGATTTCCATATGTCTTAGAACAGATCCTTTCATGCGCTCAGAATGAAAAGCTGCTGCCAGAAATCAGTATGAAAGATGAAGCAGAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGCTCCTGGTACAGTGATCAGATCCAGAAG AAGTACAGTGAGCACCCAACAGTCGATGGAACCAGGGTAGAAGTATACCAGCCGAGCCATGAGGAGTACCAGAGATCAAAGAACAAGAAGCACAACA TGAAAGCACTGGCCGAGATCTACCTACTC AGCATGACGGACGTGCTCATCACCAGTGGCTTCTCCACCTTCGGCTACGCCGCGCAGGGCCTCTCCGGCCTGACGCCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCACCGCGCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGCAAGATGGTGCCGTTCGTGAGGCACTGCGAGGACGTCAGTTGGGGCCTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGATTTTTTTTTCTTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTAGATAACTGAAGAACAAAATAGCAGTAAAGTTGT                  ]
[+] EMBL CB661026             [                                                                                                                                                                                         aGACCGAGATATGCAAGATGATCTGCCTGATGATCTAACTGCATCTCAGTACATCGGCTATGACAAATTTCTGGGTGGTCTTCTGCAAGAGGGATTTGATGAAGTATCCTGCCGAAGCAGGTATCAGTTTGCACGGTACCACAAGAACTTCACAAGAATACCTTCTTCATACCTCTTAGAAAGGTTAAGGAGACAAGAAGCATTGCAGAAGAAGTGTGGTCCAGGCACTAAATCATACAAGCAAGCTGTGAAGCTGCTGAGGTCCAGTCAGGGCGTCAACATGACGACAGATTGCAACTATCTGTTCTTGACAGTACATGCTGGGTTAGGGAACAGAATGCTTGAGATTGCTTCAGCATTTCTTTATGCACTCCTTACAAACCGGATTTTGCTTTTGGACCGTTATCAGGAGATCGGTGACCTTTTCTGTGAACCTTTCCCAGGAACCTCGTGGTTAATGCCTTCGGATTTCCCTCTAAACTATGGTGAATTTACTCAGAGTAGCCCAGAGAGCTATGGAAACATGCTGCAGAATAAGGTTGTCGGTGACAATACAGATCAGTCTCTGGCTGGTTCTAGGCCTCCCTACGTGTTCCTCTACCTTGATGGTAACTATGAATTCCATGACAAGCTTTTCTTCTGCGAAGACGACCAACAGTTCCTGCAAGATGTGCCGTGGTTGATCATGAGAACCGACATGTACTTTATACCATCACTATTTCTTATTCCAAGTTACCAAGATGAGCTCAGCAGGCTATTTCCTGAGAAAGATGCTGTTTTTCATCACTTGGCACGCTATCTTTTCCATCCGACGAATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF325952             [                                                                                                                                                                                               AGATATGCAAGATGATCTGCCTGATGATCTAACTGCATCTCAGTACATCGGCTATGACAAATTTCTGGGTGGTCTTCTGCAAGAGGGATTTGATGAAGTATCCTGCCGAAGCAGGTATCAGTTTGCACGGTACCACAAGAACTTCACAAGAATACCTTCTTCATACCTCTTAGAAAGGTTAAGGAGACAAGAAGCATTGCAGAAGAAGTGTGGTCCAGGCACTAAATCATACAAGCAAGCTGTGAAGCTGCTGAGGTCCAGTCAGGGCGTCAACATGACGACAGATTGCAACTATCTGTTCTTGACAGTACATGCTGGGTTAGGGAACAGAATGCTTGAGATTGCTTCAGCATTTCTTTATGCACTCCTTACAAACCGGATTTTGCTTTTGGACCGTTATCAGGAGATCGGTGACCTTTTCTGTGAACCTTTCCCAGGAACCTCGTGGTTAATGCCTTCGGATTTCCCTCTAAACTATGGTGAATTTACTCAGAGTAGCCCAGAGAGCTATGGAAACATGCTGCAGAATAAGGTTGTCGGTGACAATACAGATCAGTCTCTGGCTGGTTCTAGGCCTCCCTACGTGTTCCTCTACCTTGATGGTAACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB661027             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATTCAGTTAAAGGGTACTACAGGTCCTACCTTGCCAAAGCTAATAAAACTGTGGGAATTCAGATCAGGATATTTGAGAAAGAGGGCATCTTGCAAAAAAACGGGCGATTTCCATATGTCTTAGAACAGATCCTTTCATGCGCTCAGAATGAAAAGCTGCTGCCAGAAATCAGTATGAAAGATGAAGCAGAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGCTCCTGGTACAGTGATCAGATCCAGAAG AAGTACAGTGAGCACCCAACAGTCGATGGAACCAGGGTAGAAGTATACCAGCCGAGCCATGAGGAGTACCAGAGATCAAAGAACAAGAAGCACAACA TGAAAGCACTGGCCGAGATCTACCTACTC AGCATGACGGACGTGCTCATCACCAGTGGCTTCTCCACCTTCGGCTACGCCGCGCAGGGCCTCTCCGGCCTGACGCCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGCAAGATGGTGCCGTTCGTGAGGCACTGCGAGGACGTCAGTTGGGGCCTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGA TTTTTTTTCTTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTAGATAACTGAAGAACAAAATAGCAGTAAAGTTGTGTGTTACCTGAACATTGT]
[+] EMBL OSC103711            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATCCTTTCATGCGCTCAGAATGAAAAGCTGCTGCCAGAAATCAGTATGAAAGATGAAGCAGAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGCTCCTGGTACAGTGATCAGATCCAGAAGAAAGTACAGTGAGCACCCAACAGTCGATGGAACCAGGGTAGAAGTATACCAGCCGAGCCATGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB636249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCATGCGCTCAGAATGAAAAGCTGCTGCCAGAAATCAGTATGAAAGATGAAGCAGAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGCTCCTGGTACAGTGATCAGATCCAGAAG AAGTACAGTGAGCACCCAACAGTCGATGGAACCAGGGTAGAAGTATACCAGCCGAGCCATGAGGAGTACCAGAGATCAAAGAACAAGAAGCACAACA TGAAAGCACTGGCCGAGATCTACCTACTC AGCATGACGGACGTGCTCATCACCAGTGGCTTCTCCACCTTCGGNTACGCCGCGCAGGGCCTCTCCGGCCTGACGCCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGCAAGATGGTGCCGTTCGTGAGGCACTGCGAGGACGTCAGTTGGGGCCTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGA TTTTTTTTCTTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATA ATTTGATCCAAATGTAGATAACTGAAGAACAAAATAGCAGTAAAGTTGTGTGTTACCTt        ]
[+] EMBL OSS1359A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgGAAGCAGAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGCTCCTGGTACAGTGATCAGATCCAGAAG AAGTACAGTGAGCACCCAACAGTCGATGGAACCAGGGTAGAAGTATACCAGCCGAGCCATGAGGAGTACCAGAGATCAAAGAACAAGAAGCACAACA TGAAAGCACTGGCCGAGATCTACCTACTC AGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BI810757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGAACAAGAAGCACAACAGTGAAAGCACT GCCGAGATCTACCTACTCAAGCATGACGGACGTGCTCATCACCAGTGGCTTCTCCACCTTCGGCTACGCCGCGCA GGCCTCTCCGGCCTGAC CCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCC CCGTGCCGCCGCGCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGCAAGATGGT CCGTTCGTGAGGCACTGCGAGGACGTCAGTTGGGGCCTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGA TTTTTTTTCTTTGTCC AAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCC AATGTAGATAACTGAAAAAaa                                    ]


>consensus_11782#0 CCAGCGGGCCGAGCCGCGGAGAACGAGGCGAGGCGGTGGGGAAGGCTCCGGCGAGCCTCC GCGCGCGCCGCGCTGGTGCTCTGCTCGCTGACGATGATTCCAGTCGTCGTCGTCCTCCAC CGGTGTGCGGTCTCCTCCTCCTGGCCGGATCGGGTTTTCGAAGCCAAGCACATCGCGGGA GCCGGCGAGCAAGATATGCAAGATGATCTGCCTGATGATCTAACTGCATCTCAGTACATC GGCTATGACAAATTTCTGGGTGGTCTTCTGCAAGAGGGATTTGATGAAGTATCCTGCCGA AGCAGGTATCAGTTTGCACGGTACCACAAGAACTTCACAAGAATACCTTCTTCATACCTC TTAGAAAGGTTAAGGAGACAAGAAGCATTGCAGAAGAAGTGTGGTCCAGGCACTAAATCA TACAAGCAAGCTGTGAAGCTGCTGAGGTCCAGTCAGGGCGTCAACATGACGACAGATTGC AACTATCTGTTCTTGACAGTACATGCTGGGTTAGGGAACAGAATGCTTGAGATTGCTTCA GCATTTCTTTATGCACTCCTTACAAACCGGATTTTGCTTTTGGACCGTTATCAGGAGATC GGTGACCTTTTCTGTGAACCTTTCCCAGGAACCTCGTGGTTAATGCCTTCGGATTTCCCT CTAAACTATGGTGAATTTACTCAGAGTAGCCCAGAGAGCTATGGAAACATGCTGCAGAAT AAGGTTGTCGGTGACAATACAGATCAGTCTCTGGCTGGTTCTAGGCCTCCCTACGTGTTC CTCTACCTTGATGGTAACTATGAATTCCATGACAAGCTTTTCTTCTGCGAAGACGACCAA CAGTTCCTGCAAGATGTGCCGTGGTTGATCATGAGAACCGACATGTACTTTATACCATCA CTATTTCTTATTCCAAGTTACCAAGATGAGCTCAGCAGGCTATTTCCTGAGAAAGATGCT GTTTTTCATCACTTGGCACGCCATCTTTTCCATCCGACGAATAGCATATGGTATTCAGTT AAAGGGTACTACAGGTCCTACCTTGCCAAAGCTAATAAAACTGTGGGAATTCAGATCAGG ATATTTGAGAAAGAGGGCATCTTGCAAAAAAACGGGCGATTTCCATATGTCTTAGAACAG ATCCTTTCATGCGCTCAGAATGAAAAGCTGCTGCCAGAAATCAGTATGAAAGATGAAGCA GAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGC TCCTGGTACAGTGATCAGATCCAGAAGAAGTACAGTGAGCACCCAACAGTCGATGGAACC AGGGTAGAAGTATACCAGCCGAGCCATGAGGAGTACCAGAGATCAAAGAACAAGAAGCAC AACATGAAAGCACTGGCCGAGATCTACCTACTCAGCATGACGGACGTGCTCATCACCAGT GGCTTCTCCACCTTCGGCTACGCCGCGCAGGGCCTCTCCGGCCTGACGCCGTGGATCATG TTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAG CCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGC AAGATGGTGCCGTTCGTGAGGCACTGCGAGGACGTCAGTTGGGGCCTGAAGGTTGTAAAT CAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGATTTTTTTTC TTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTA GATAACTGAAGAACAAAATAGCAGTAAAGTTGTGTGTTACCTGAACATTGT



consensusID : consensus_11782#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 477
fasta sequence
                              [CAAAGAACAAGAAGCACAACATGAAAGCACTGGCCGAGATCTACCTANTCAGCATGACGGACGTGCTNATCACCAGTGGCTTCTCCACCTTGGTACGCCGCGCAGGGCNTCTCCGGCNTGACGCCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGCAAGATGGTGCCGTTCGTGAGGCACTGCGAGNNNGTCAGTTGGGGCCTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGATTTTTTTTCTTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTATGTGGAGTAAAGAATGAATCTGTGTAGTCCTTTTGGACAAAA]

[+] EMBL AU092062             [CAAAGAACAAGAAGCACAACATGAAAGCACTGGCCGAGATCTACCTANTCAGCATGACGGACGTGCTNATCACCAGTGGCTTCTCCACCTTGGTACGCCGCGCAGGGCNTCTCCGGCNTGACGCCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGCAAGATGGTGCCGTTCGTGAGGCACTGCGAGNNNGTCAGTTGGGGCCTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGATTTTTTTTCTTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTATGTGGAGTAAAGAATGAATCTGTGTAGTCCTTTTGGACAAAA]


>consensus_11782#1 CAAAGAACAAGAAGCACAACATGAAAGCACTGGCCGAGATCTACCTANTCAGCATGACGG ACGTGCTNATCACCAGTGGCTTCTCCACCTTGGTACGCCGCGCAGGGCNTCTCCGGCNTG ACGCCGTGGATCATGTTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGC GCCATGTCGATCGAGCCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGG AACGCTGACCTGGGCAAGATGGTGCCGTTCGTGAGGCACTGCGAGNNNGTCAGTTGGGGC CTGAAGGTTGTAAATCAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAG GGAAGATTTTTTTTCTTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATA TTTGATCCAAATGTATGTGGAGTAAAGAATGAATCTGTGTAGTCCTTTTGGACAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11782#0      CCAGCGGGCCGAGCCGCGGAGAACGAGGCGAGGCGGTGGGGAAGGCTCCGGCGAGCCTCC 60
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      GCGCGCGCCGCGCTGGTGCTCTGCTCGCTGACGATGATTCCAGTCGTCGTCGTCCTCCAC 120
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      CGGTGTGCGGTCTCCTCCTCCTGGCCGGATCGGGTTTTCGAAGCCAAGCACATCGCGGGA 180
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      GCCGGCGAGCAAGATATGCAAGATGATCTGCCTGATGATCTAACTGCATCTCAGTACATC 240
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      GGCTATGACAAATTTCTGGGTGGTCTTCTGCAAGAGGGATTTGATGAAGTATCCTGCCGA 300
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      AGCAGGTATCAGTTTGCACGGTACCACAAGAACTTCACAAGAATACCTTCTTCATACCTC 360
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      TTAGAAAGGTTAAGGAGACAAGAAGCATTGCAGAAGAAGTGTGGTCCAGGCACTAAATCA 420
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      TACAAGCAAGCTGTGAAGCTGCTGAGGTCCAGTCAGGGCGTCAACATGACGACAGATTGC 480
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      AACTATCTGTTCTTGACAGTACATGCTGGGTTAGGGAACAGAATGCTTGAGATTGCTTCA 540
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      GCATTTCTTTATGCACTCCTTACAAACCGGATTTTGCTTTTGGACCGTTATCAGGAGATC 600
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      GGTGACCTTTTCTGTGAACCTTTCCCAGGAACCTCGTGGTTAATGCCTTCGGATTTCCCT 660
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      CTAAACTATGGTGAATTTACTCAGAGTAGCCCAGAGAGCTATGGAAACATGCTGCAGAAT 720
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      AAGGTTGTCGGTGACAATACAGATCAGTCTCTGGCTGGTTCTAGGCCTCCCTACGTGTTC 780
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      CTCTACCTTGATGGTAACTATGAATTCCATGACAAGCTTTTCTTCTGCGAAGACGACCAA 840
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      CAGTTCCTGCAAGATGTGCCGTGGTTGATCATGAGAACCGACATGTACTTTATACCATCA 900
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      CTATTTCTTATTCCAAGTTACCAAGATGAGCTCAGCAGGCTATTTCCTGAGAAAGATGCT 960
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      GTTTTTCATCACTTGGCACGCCATCTTTTCCATCCGACGAATAGCATATGGTATTCAGTT 1020
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      AAAGGGTACTACAGGTCCTACCTTGCCAAAGCTAATAAAACTGTGGGAATTCAGATCAGG 1080
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      ATATTTGAGAAAGAGGGCATCTTGCAAAAAAACGGGCGATTTCCATATGTCTTAGAACAG 1140
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      ATCCTTTCATGCGCTCAGAATGAAAAGCTGCTGCCAGAAATCAGTATGAAAGATGAAGCA 1200
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      GAAGCACCGACCGCGCCCAAGAATAACCAGACAATTGCTGTTCTTACAACTTCTCTGAGC 1260
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      TCCTGGTACAGTGATCAGATCCAGAAGAAGTACAGTGAGCACCCAACAGTCGATGGAACC 1320
consensus_11782#1      ------------------------------------------------------------
                                                                                   

consensus_11782#0      AGGGTAGAAGTATACCAGCCGAGCCATGAGGAGTACCAGAGATCAAAGAACAAGAAGCAC 1380
consensus_11782#1      -------------------------------------------CAAAGAACAAGAAGCAC 17
                                                                  *****************

consensus_11782#0      AACATGAAAGCACTGGCCGAGATCTACCTACTCAGCATGACGGACGTGCTCATCACCAGT 1440
consensus_11782#1      AACATGAAAGCACTGGCCGAGATCTACCTANTCAGCATGACGGACGTGCTNATCACCAGT 77
                       ****************************** ******************* *********

consensus_11782#0      GGCTTCTCCACCTTCGGCTACGCCGCGCAGGGCCTCTCCGGCCTGACGCCGTGGATCATG 1500
consensus_11782#1      GGCTTCTCCACCTTGG--TACGCCGCGCAGGGCNTCTCCGGCNTGACGCCGTGGATCATG 135
                       ************** *  *************** ******** *****************

consensus_11782#0      TTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAG 1560
consensus_11782#1      TTCAGGTCGGAGAACCACGCCATGCCGGACCCGCCGTGCCGCCGCGCCATGTCGATCGAG 195
                       ************************************************************

consensus_11782#0      CCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGC 1620
consensus_11782#1      CCGTGCTTCCATCAGGCTCCCTTCTACGACTGCAAGGCGAAGAGGAACGCTGACCTGGGC 255
                       ************************************************************

consensus_11782#0      AAGATGGTGCCGTTCGTGAGGCACTGCGAGGACGTCAGTTGGGGCCTGAAGGTTGTAAAT 1680
consensus_11782#1      AAGATGGTGCCGTTCGTGAGGCACTGCGAGNNNGTCAGTTGGGGCCTGAAGGTTGTAAAT 315
                       ******************************   ***************************

consensus_11782#0      CAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGATTTTTTTTC 1740
consensus_11782#1      CAAACTCAGTGGTAGCTGTAAATTTGTCGTTTGCTCGTTAACTAGGGAAGATTTTTTTTC 375
                       ************************************************************

consensus_11782#0      TTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTA 1800
consensus_11782#1      TTTGTCCAAAAGGACTACACAGATTCATTCTTTACTCCACATATATTTGATCCAAATGTA 435
                       ************************************************************

consensus_11782#0      GATA-ACTGAAGAACAAAATAGCAGTAAAGTTGTGTGTTACCTGAACATTGT 1851
consensus_11782#1      TGTGGAGTAAAGAATGAAT---CTGTGTAGTCCTTTTGGACAAAA------- 477
                         *  * * *****  **    * **  ***  * *   **   *       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)