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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11789#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3669 fasta sequence
[CAGCCTGCGCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCCAACTACGTGGCGAGACTGGGACGCGGCGCCGCCGGGTTCACCACCCGCTCGGATATCGGGCCCGCCATGGGGCGCGGCCGTGGGAAGCCGCCTGGGGACGACGGCGACGGCGATGGCGGTGGCGACGAGGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGCCTCTTCTCCAACGCCGGCCACGACGACGACGACGACGACCGCGAGGCGGACGCGGTCTGGGAGGGCATCGACCGGAGGATGGACTCGCGCCGCAAGGACTGGCGAGAGGCGCGGCTGAAGCAGGAGATCGAGAGGTACCGCGCGTCCAACCCTAAAATCACCGAGCAATTCGCCGATCTGAAGCGGAAATTGGTCGATTTGTCAGCGCAGGAGTGGGAGAGCATACCGGAGATTGGGGATTATTCGCTTCGTCGCAACAAGAAGAGGCGATTTGAGAGCTTTGTCCCGGTGCCTGACACCCTGCTCGAGAAGGCCCGGCAGGAGCAGGGGCATGTCACCGCATTGGACCCCAAGAGCCGTGCAGCCGCCGCTGGCGCAGAGACGCCATGGGCGCAGACTCCGGTTACTGATCTGACAGCCGTCGGCGAAGGCCGTGGCACCGTGCTTTCTTTGAAGCTGGACAGGTTATCCGATTCGGTATCCGGTGTTACTATTGTTGATCCAAGGGGTTACCTGACTAACCTGAAGAGTATGAAGATTACTAGTGATGCTGAAATTTCTGACATAAAGAAGGCCAGGTTGTTGCTCAAGTCAGTGATACAGACGAACCCAAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCCGGCAAGCTTCAGGTTGCTCAGCAGCTCATCCAGCGTGGCTGCGAGGAGTGCCCCACGAATGAGGATGTTTGGCTCAAGGCATGCCGGTTGGCCAGCCCAGATGAGGCAAAGGCCGTGATTGCCAGGGGTGTGAAGGAAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCGAAGTTGGAAACTAGTGACTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGGCTGTGGAAATCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGGCTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCATTCCATTTGGAACTGTGGCTTGCACTAGCGAGGCTGGAGACGTATGACCAAGCAAAGAAGGTACTTAACAAGGCAAAAGAAAAGCTCCCTAAGGAGCCTGCCATCTGGATTATGGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCGAGTCAGTAAACGAGGTGATTGAGAGAAGTATAAAAACTTTACAGGGAAAAGGATTGGGTATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGATAAATGGCTTGAGGAAGTCACGTGCTGTTCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTGCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGGTTAGCAATATTCTTGAACTACCATGACCATGTAGACAATATTCTTGAACTACCAGCACCAGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTTCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGTCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGATCAGTTT]
[+] EMBL AK101040 [CAGCCTGCGCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCCAACTACGTGGCGAGACTGGGACGCGGCGCCGCCGGGTTCACCACCCGCTCGGATATCGGGCCCGCCATGGGGCGCGGCCGTGGGAAGCCGCCTGGGGACGACGGCGACGGCGATGGCGGTGGCGACGAGGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGCCTCTTCTCCAACGCCGGCCACGACGACGACGACGACGACCGCGAGGCGGACGCGGTCTGGGAGGGCATCGACCGGAGGATGGACTCGCGCCGCAAGGACTGGCGAGAGGCGCGGCTGAAGCAGGAGATCGAGAGGTACCGCGCGTCCAACCCTAAAATCACCGAGCAATTCGCCGATCTGAAGCGGAAATTGGTCGATTTGTCAGCGCAGGAGTGGGAGAGCATACCGGAGATTGGGGATTATTCGCTTCGTCGCAACAAGAAGAGGCGATTTGAGAGCTTTGTCCCGGTGCCTGACACCCTGCTCGAGAAGGCCCGGCAGGAGCAGGGGCATGTCACCGCATTGGACCCCAAGAGCCGTGCAGCCGCCGCTGGCGCAGAGACGCCATGGGCGCAGACTCCGGTTACTGATCTGACAGCCGTCGGCGAAGGCCGTGGCACCGTGCTTTCTTTGAAGCTGGACAGGTTATCCGATTCGGTATCCGGTGTTACTATTGTTGATCCAAGGGGTTACCTGACTAACCTGAAGAGTATGAAGATTACTAGTGATGCTGAAATTTCTGACATAAAGAAGGCCAGGTTGTTGCTCAAGTCAGTGATACAGACGAACCCAAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCCGGCAAGCTTCAGGTTGCTCAGCAGCTCATCCAGCGTGGCTGCGAGGAGTGCCCCACGAATGAGGATGTTTGGCTCAAGGCATGCCGGTTGGCCAGCCCAGATGAGGCAAAGGCCGTGATTGCCAGGGGTGTGAAGGAAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCGAAGTTGGAAACTAGTGACTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGGCTGTGGAAATCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGGCTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCATTCCATTTGGAACTGTGGCTTGCACTAGCGAGGCTGGAGACGTATGACCAAGCAAAGAAGGTACTTAACAAGGCAAAAGAAAAGCTCCCTAAGGAGCCTGCCATCTGGATTATGGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCGAGTCAGTAAACGAGGTGATTGAGAGAAGTATAAAAACTTTACAGGGAAAAGGATTGGGTATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGATAAATGGCTTGAGGAAGTCACGTGCTGTTCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTGCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGGTTAGCAATATTCTTGAACTACCATGACCATGTAGACAATATTCTTGAACTACCAGCACCAGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTTCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGTCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGATCAGTTT]
[+] EMBL OSR08441A [ ATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCgataaag ]
[+] EMBL OSR0851A [ ATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGANAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTAGTGGCTCTTGGCCAGGNTGNAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAG ]
consensusID : consensus_11789#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2154 fasta sequence
[AAAGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAACCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCANAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCTATTGTTAAGAGCACTATTGNGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAGCAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTCTAATTCTTCTGCGCATGCTGGCAATGGAATATATAGAGAAAGAAACACAGTTGGGTAGTGAACTGGGATGGACTCGAGCTGCGACCTCGTGATTCTGTGTACCACCGAACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGATTACTACAATTTGTATCGGCGATCACCAGTTAAAACCTGTATCGTTTGTATGCCCTAATTGCCAGCAATACTTCTGTACTACCATGAGCATGTTTATTCCTCCAGATGCATACCACAAATTCTTAGATGGGTGTATTTGCTAGCCGCGACTTGGGATGATGTAATTTTTCTTGGGTTCGGTTTATTCTCAGAGCACTGGCGTCTGTATCTACGACTGTAAGATCTGCCTGAATGTCGGCTTAATATATGAGATAATGCCCCATTTTTCTAGCAAAAAAAAA]
[+] EMBL CB640930 [AAAGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAACCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCANAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCTATTGTTAAGAGCACTATTGNGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTT ]
[+] EMBL AK071378 [ GGCTATTGTTAAGAGCACTATTG GCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAGCAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTCTAATTCTTCTGCGCATGCTGGCAATGGAATATATAGAGAAAGAAACACAGTTGGGTAGTGAACTGGGATGGACTCGAGCTGCGACCTCGTGATTCTGTGTACCACCGAACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGATTACTACAATTTGTATCGGCGATCACCAGTTAAAACCTGTATCGTTTGTATGCCCTAATTGCCAGCAATACTTCTGTACTACCATGAGCATGTTTATTCCTCCAGATGCATACCACAAATTCTTAGATGGGTGTATTTGCTAGCCGCGACTTGGGATGATGTAATTTTTCTTGGGTTCGGTTTATTCTCAGAGCACTGGCGTCTGTATCTACGACTGTAAGATCTGCCTGAATGTCGGCTTAATATATGAGATAATGCCCC ]
[+] EMBL BQ909141 [ AGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTCTAATTCTTCTGCGCATGCTGGCAATGGAATATATTGAGAAAGAAACACAGTTGGGTAGTGAACTGGGATGGACTCGAGCTGCGACCTCGTGATTCTGTGTACCACCGAACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGATTACTACAATTTGTATCGGCGATCACCAGTTAAAACCTGTATCGTTTGGATGCCCTAATTGCCAGCAATACTTCTGTACTACCATGAGCATGTTTATTCCTCCAGATGCATACCACAAATTCTTAGATCGGTGTATTTGCTAGCCGCGACTTGGGATGATGTAATTTTTCTTGGGTTCGGTTTATTCTCAGAGCACTGGCGTCTGTATCTACGACTGTAAGATCTGCCTGAATGTCGGCTTAATATATGAGATAATGCCCCATTTTTCTAGCAAAAAAAAA]
consensusID : consensus_11789#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2088 fasta sequence
[CTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAGCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTCCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGCCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGA]
[+] EMBL AK064411 [CTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAGCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTCCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGCCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGA]
consensusID : consensus_11789#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 694 fasta sequence
[CGAACTTCCACCATGNAACCGCTGATNCNCATAAGGATGTTGACAACGATGTGTTGCATCAGACCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTT-CTGCTACGACCT-CGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGA-CCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGGTATAGTGTTATACAGATATCATGCCATCAAATGAATGTTTCTTTCGGCAAAGCTCTTCTCCATTTCATGTGACTAAATTATACAATTCTGAAGAAACTTCATTTCACCTAGAATTTTCATGTATTCCATTTCATACTAAAAAAA]
[+] EMBL AU081577 [CGAACTTCCACCATGNAACCGCTGATNCNCATAAGGATGTTGACAACGATGTGTTGCATCAGACCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTT CTGCTACGACCT CGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGA CCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGGTATAGTGTTATACAGATATCATGCCATCAAATGAATGTTTCTTTCGGCAAAGCTCTTCTCCATTTCATGTGACTAAATTATACAATTCTGAAGAAACTTCATTTCACCTAGAATTTTCATGTATTCCATTTCATACTAAAAAAA]
[+] EMBL AU031722 [ gnCAGTGAACTGGGATGCANTCAAGCAACTGCTTCCTGCTACGACCTNCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCNACCGTGAAGCTTACCTGAAGAAGCNCCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGACCCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGNAGAAGAGCTTTGTTCTACATGTAAGNTATAGTGTTATACAGATATCATGCNATCAAATGAATGTTTCTTTCGGNAAAGNTCTTCTNNATTTCATGTGACTAAATTATACAATTCTGAAGAANCTTCATTTCACCTAGAATTTTCATGTATTCNATTTNATANTAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CAGCCTGCGCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCCAACTACGTGGCGA 60
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GACTGGGACGCGGCGCCGCCGGGTTCACCACCCGCTCGGATATCGGGCCCGCCATGGGGC 120
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GCGGCCGTGGGAAGCCGCCTGGGGACGACGGCGACGGCGATGGCGGTGGCGACGAGGAGG 180
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 AGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGCCTCT 240
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 TCTCCAACGCCGGCCACGACGACGACGACGACGACCGCGAGGCGGACGCGGTCTGGGAGG 300
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GCATCGACCGGAGGATGGACTCGCGCCGCAAGGACTGGCGAGAGGCGCGGCTGAAGCAGG 360
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 AGATCGAGAGGTACCGCGCGTCCAACCCTAAAATCACCGAGCAATTCGCCGATCTGAAGC 420
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GGAAATTGGTCGATTTGTCAGCGCAGGAGTGGGAGAGCATACCGGAGATTGGGGATTATT 480
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CGCTTCGTCGCAACAAGAAGAGGCGATTTGAGAGCTTTGTCCCGGTGCCTGACACCCTGC 540
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 TCGAGAAGGCCCGGCAGGAGCAGGGGCATGTCACCGCATTGGACCCCAAGAGCCGTGCAG 600
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CCGCCGCTGGCGCAGAGACGCCATGGGCGCAGACTCCGGTTACTGATCTGACAGCCGTCG 660
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GCGAAGGCCGTGGCACCGTGCTTTCTTTGAAGCTGGACAGGTTATCCGATTCGGTATCCG 720
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GTGTTACTATTGTTGATCCAAGGGGTTACCTGACTAACCTGAAGAGTATGAAGATTACTA 780
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GTGATGCTGAAATTTCTGACATAAAGAAGGCCAGGTTGTTGCTCAAGTCAGTGATACAGA 840
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CGAACCCAAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCCGGCA 900
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 AGCTTCAGGTTGCTCAGCAGCTCATCCAGCGTGGCTGCGAGGAGTGCCCCACGAATGAGG 960
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 ATGTTTGGCTCAAGGCATGCCGGTTGGCCAGCCCAGATGAGGCAAAGGCCGTGATTGCCA 1020
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GGGGTGTGAAGGAAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCGAAGTTGGAAA 1080
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CTAGTGACTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAG 1140
consensus_11789#1 ---------------------------------AAAGGTTGGAACACATTCCTGATTCAG 27
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 TCAGGCTGTGGAAATCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGGCTGTTGCTTC 1200
consensus_11789#1 TCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTC 87
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 ACAGGGCTGTGGAGTGCTGCCCATTCCATTTGGAACTGTGGCTTGCACTAGCGAGGCTGG 1260
consensus_11789#1 ACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGG 147
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 AGACGTATGACCAAGCAAAGAAGGTACTTAACAAGGCAAAAGAAAAGCTCCCTAAGGAGC 1320
consensus_11789#1 AGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAAC 207
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CTGCCATCTGGATTATGGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCGAGTCAGTAA 1380
consensus_11789#1 CTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAA 267
consensus_11789#2 ------------------------------------------------------------
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 ACGAGGTGATTGAGAGAAGTATAAAAACTTTACAGGGAAAAGGATTGGGTATTGACAGGG 1440
consensus_11789#1 TCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGG 327
consensus_11789#2 ---------------------------CTGAGCATGCTGGATCTGTGATGACTTGCCAGG 33
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 AGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCATGCTGGATCTGTGATGACTTGCCAGG 1500
consensus_11789#1 AGGCATGGCTAAAGGAAGCANAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGG 387
consensus_11789#2 CTATTGTGAAGAACACTATTGG-CGTTGGTGTTGATGATGAAGACAGAAAACGCACATGG 92
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CTATTGTGAAGAACACTATTGG-CGTTGGTGTTGATGATGAAGACAGAAAACGCACATGG 1559
consensus_11789#1 CTATTGTTAAGAGCACTATTGNGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGG 447
consensus_11789#2 GTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTAT 152
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTAT 1619
consensus_11789#1 GTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTAT 507
consensus_11789#2 GCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTT 212
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTT 1679
consensus_11789#1 GCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTT 567
consensus_11789#2 GAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATAC 272
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATAC 1739
consensus_11789#1 GAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTAC 627
consensus_11789#2 AATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGAT 332
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 AATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGAT 1799
consensus_11789#1 AATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGAT 687
consensus_11789#2 GTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAG 392
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAG 1859
consensus_11789#1 GTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAG 747
consensus_11789#2 ATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATT 452
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 ATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATT 1919
consensus_11789#1 ATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAGCAATGAACCAGAGAGAGCAAGAATT 807
consensus_11789#2 CTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATT 512
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATT 1979
consensus_11789#1 CTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATT 867
consensus_11789#2 GTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAG 572
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAG 2039
consensus_11789#1 GTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAG 927
consensus_11789#2 TTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGT 632
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 TTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGT 2099
consensus_11789#1 TTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGC 987
consensus_11789#2 CATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAA------- 685
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAA------- 2152
consensus_11789#1 CATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATC 1047
consensus_11789#2 -------------------CTAATCTAGAGGAGAAGA----------------------- 703
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 -------------------CTAATCTAGAGGAGAAGATAAATGGCTTGAGGAAGTCACGT 2193
consensus_11789#1 CCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGT 1107
consensus_11789#2 ---------------------AAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCA 742
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GCTGTTCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCA 2253
consensus_11789#1 GCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCA 1167
consensus_11789#2 GTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCA 802
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCA 2313
consensus_11789#1 GTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCA 1227
consensus_11789#2 TTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGT 862
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 TTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGT 2373
consensus_11789#1 TTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGT 1287
consensus_11789#2 CCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTC 922
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 CCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTC 2433
consensus_11789#1 CCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTC 1347
consensus_11789#2 ATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGG 982
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 ATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGG 2493
consensus_11789#1 ATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGG 1407
consensus_11789#2 TTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAA 1042
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 TTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAA 2553
consensus_11789#1 TTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAA 1467
consensus_11789#2 TTCGAACTACAAC-ATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGC 1101
consensus_11789#3 --CGAACTTCCACCATGNAACCGCTGATNCNCATAAGGATGTTG-ACAACGATGTGTTGC 57
consensus_11789#0 TTCGAACTACAAC-ATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGC 2612
consensus_11789#1 TTTGAACTGCAAC-ATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGC 1526
***** * ** *** ** ****** * ** ******** **** **********
consensus_11789#2 ATCAGAGCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACA 1161
consensus_11789#3 ATCAGACCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACA 117
consensus_11789#0 ATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACA 2672
consensus_11789#1 AGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACA 1586
* **** ****************************** * ********************
consensus_11789#2 CCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCC 1221
consensus_11789#3 CCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCC 177
consensus_11789#0 CCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCC 2732
consensus_11789#1 TCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCC 1646
***** *************************** **************** ********
consensus_11789#2 AAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTA----------AGGTC 1271
consensus_11789#3 AAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTA----------AGGTC 227
consensus_11789#0 AAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTA----------AGGTC 2782
consensus_11789#1 AAATGCTGCAGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTC 1706
******** *********** *** ************** ** * *****
consensus_11789#2 TTCTTCT------CAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTG 1325
consensus_11789#3 -------------------GATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTG 268
consensus_11789#0 TTCTTCTG-----CAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTG 2837
consensus_11789#1 TAATTCTTCTGCGCATGCTGGCAATGGAATATATAGAGAAAGAAACACAGTTGGGTAGTG 1766
* ** * ***** ************ *** * * ****
consensus_11789#2 AACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGC-ATTCTCTAC-CCACCGA 1383
consensus_11789#3 AACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGC-ATTCTCTAC-CCACCGA 326
consensus_11789#0 AACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGC-ATTCTCTAC-CCACCGA 2895
consensus_11789#1 AACTGGGATGGACTCGA------------GCTGCGACCTCGTGATTCTGTGTACCACCGA 1814
********** **** * *** ******** ***** * *******
consensus_11789#2 ACTGATTGCTGCAGTCCCCCAACCGTGAAGC-TTACCTGAAGAAGCACCAGGCATGCCAT 1442
consensus_11789#3 ACTGATTGCTGCAGTCCCCCAACCGTGAAGC-TTACCTGAAGAAGCACCAGGCATGCCAT 385
consensus_11789#0 ACTGATTGCTGCAGTCCCCCAACCGTGAAGC-TTACCTGAAGAAGCACCAGGCATGCCAT 2954
consensus_11789#1 ACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGAT 1874
************* *** ****** ****** ************* * ********* **
consensus_11789#2 TGCTCCAATGTG-ATTGGCTATCTCTAGTTAATG-------------------------- 1475
consensus_11789#3 TGCTCCAATGTG-ATTGGCTATCTCTAGTTAATG-------------------------- 418
consensus_11789#0 TGCTCCAATGTG-ATTGGCTATCTCTAGTTAATGGTTAGCAATATTCTTGAACTACCATG 3013
consensus_11789#1 TACTACAATTTGTATCGGCGATCACCAGTTAAAA-------------------------- 1908
* ** **** ** ** *** *** * ******
consensus_11789#2 ------------------------------------ACCAGGAGCATGAAGCATTACAAG 1499
consensus_11789#3 ------------------------------------ACCAGGAGCATGAAGCATTACAAG 442
consensus_11789#0 ACCATGTAGACAATATTCTTGAACTACCAGCACCAGACCAGGAGCATGAAGCATTACAAG 3073
consensus_11789#1 -------------------------------------CCTGTATCGT------TTGTATG 1925
** * * * * ** * *
consensus_11789#2 ATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCAC 1559
consensus_11789#3 ATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCAC 502
consensus_11789#0 ATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCAC 3133
consensus_11789#1 CCCTAATTGCCAGCAA----TACTTCTGTACTACCATGAGCAT-----GTTTATTCCTCC 1976
* * ** * * ** * ** ** ** * ** * * *** *
consensus_11789#2 TGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTCCGA 1619
consensus_11789#3 TGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGGTATAGTGTTATA 562
consensus_11789#0 TGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTTCGA 3193
consensus_11789#1 AGATGCATACCACAAATTCT-TAGATGGG------TGTATTTGCTAGCCGCGAC-TTGGG 2028
* *** * ** ** *** * * * ** ** ** *
consensus_11789#2 AGGACCTTCAGCT-TCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGA 1678
consensus_11789#3 CAGATATCATGCCATCAAATGAATGTTTCTTTCGGCAAAGCTCTT-CTCCATTTCATGTG 621
consensus_11789#0 AGGACCTTCAGCT-TCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGA 3252
consensus_11789#1 ATGATGTAATTTT-TCTTGGGTTCGGTTTATTC-TCAGAGCACTGGCGTCTGTATCTACG 2086
** * ** * * * *
consensus_11789#2 GGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGCCTACAATTTATT 1738
consensus_11789#3 ACTAAATTATACAATTCTGAAGAAAC-TTCATTTCACCTAGAATTTTCATGTATTCCATT 680
consensus_11789#0 GGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGTCTACAATTTATT 3312
consensus_11789#1 ACTGTA------AGATCTGCCTGAATGTCGGCTTAATATATGAGATA---ATGCCCCATT 2137
* * * * * * ***
consensus_11789#2 TAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGG 1798
consensus_11789#3 TCAT-ACTAAAAAAA--------------------------------------------- 694
consensus_11789#0 TAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGG 3372
consensus_11789#1 TTTCTAGCAAAAAAAAA------------------------------------------- 2154
* * * *
consensus_11789#2 AAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCA 1858
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 AAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCA 3432
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 GTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTC 1918
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 GTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTC 3492
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAG 1978
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 ATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAG 3552
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 TTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTG 2038
consensus_11789#3 ------------------------------------------------------------
consensus_11789#0 TTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTG 3612
consensus_11789#1 ------------------------------------------------------------
consensus_11789#2 ATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGA------- 2088
consensus_11789#3 ---------------------------------------------------------
consensus_11789#0 ATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGATCAGTTT 3669
consensus_11789#1 ---------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||